RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	MPPED1	O15442	326 aa		13.68	□□□□□ -0.22
CIRBP-238	ENST00000592412	TUSC2	O75896	110 aa		13.68	□□□□□ -0.22
CIRBP-238	ENST00000592412	OR2J3	O76001	311 aa		13.68	□□□□□ -0.22
CIRBP-238	ENST00000592412	OR2C1	O95371	312 aa		13.68	□□□□□ -0.22
CIRBP-238	ENST00000592412	LY6G6C	O95867	125 aa		13.68	□□□□□ -0.22
CIRBP-238	ENST00000592412	CDK1	P06493	297 aa		13.68	□□□□□ -0.22
CIRBP-238	ENST00000592412	SAA1	P0DJI8	122 aa	Predicted RBP	13.68	□□□□□ -0.22
CIRBP-238	ENST00000592412	RRAS	P10301	218 aa		13.68	□□□□□ -0.22
CIRBP-238	ENST00000592412	CBX3	Q13185	183 aa		13.68	□□□□□ -0.22
CIRBP-238	ENST00000592412	RAB11B	Q15907	218 aa		13.68	□□□□□ -0.22
CIRBP-238	ENST00000592412	C15orf32	Q32M92	178 aa		13.68	□□□□□ -0.22
CIRBP-238	ENST00000592412	NECAP1	Q8NC96	275 aa		13.68	□□□□□ -0.22
CIRBP-238	ENST00000592412	OR10J5	Q8NHC4	309 aa		13.68	□□□□□ -0.22
CIRBP-238	ENST00000592412	TMEM203	Q969S6	136 aa		13.68	□□□□□ -0.22
CIRBP-238	ENST00000592412	TECR	Q9NZ01	308 aa	Known RBP	13.68	□□□□□ -0.22
CIRBP-238	ENST00000592412	LGALS9	O00182	355 aa		13.67	□□□□□ -0.22
CIRBP-238	ENST00000592412	DIRAS3	O95661	229 aa		13.67	□□□□□ -0.22
CIRBP-238	ENST00000592412	SPHAR	Q15513	63 aa		13.67	□□□□□ -0.22
CIRBP-238	ENST00000592412	C2orf76	Q3KRA6	126 aa		13.67	□□□□□ -0.22
CIRBP-238	ENST00000592412	LIPK	Q5VXJ0	399 aa		13.67	□□□□□ -0.22
CIRBP-238	ENST00000592412	TMEM61	Q8N0U2	210 aa		13.67	□□□□□ -0.22
CIRBP-238	ENST00000592412	OR56B1	Q8NGI3	324 aa		13.67	□□□□□ -0.22
CIRBP-238	ENST00000592412	FAM3D	Q96BQ1	224 aa		13.67	□□□□□ -0.22
CIRBP-238	ENST00000592412	CNBD2	Q96M20	576 aa		13.67	□□□□□ -0.22
CIRBP-238	ENST00000592412	CCDC140	Q96MF4	163 aa		13.67	□□□□□ -0.22
CIRBP-238	ENST00000592412	MLX	Q9UH92	298 aa		13.67	□□□□□ -0.22
CIRBP-238	ENST00000592412	IGKV1D-8	A0A087WSZ0	117 aa		13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412	TMEM272	A0A1B0GTI8	110 aa		13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412		A0A1B0GW64	132 aa		13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412	TMEM213	A2RRL7	107 aa		13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412	HMX3	A6NHT5	357 aa		13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412	TEX22	C9J3V5	150 aa		13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412	CBLN1	P23435	193 aa		13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412	RPS25	P62851	125 aa	Known RBP	13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412	PMS2P11	Q13670	270 aa		13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412	CDK10	Q15131	360 aa		13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412	OSR1	Q8TAX0	266 aa	Predicted RBP	13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412	SPIN2A	Q99865	258 aa		13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412	SPIN2B	Q9BPZ2	258 aa		13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412	ST6GALNAC5	Q9BVH7	336 aa		13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412	RAB26	Q9ULW5	256 aa		13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412	TPRKB	Q9Y3C4	175 aa		13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412	KIAA1109	Q2LD37	5005 aa		13.66	□□□□□ -0.22
CIRBP-238	ENST00000592412		E7EUB6	86 aa		13.65	□□□□□ -0.22
CIRBP-238	ENST00000592412	DENR	O43583	198 aa	Known RBP	13.65	□□□□□ -0.22
CIRBP-238	ENST00000592412	GGCT	O75223	188 aa	Known RBP	13.65	□□□□□ -0.22
CIRBP-238	ENST00000592412	IGHV3-23	P01764	117 aa		13.65	□□□□□ -0.22
CIRBP-238	ENST00000592412	IRF3	Q14653	427 aa		13.65	□□□□□ -0.22
CIRBP-238	ENST00000592412	GPHB5	Q86YW7	130 aa		13.65	□□□□□ -0.22
CIRBP-238	ENST00000592412	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.65	□□□□□ -0.22
CIRBP-238	ENST00000592412	ADTRP	Q96IZ2	230 aa		13.65	□□□□□ -0.22
CIRBP-238	ENST00000592412	GGTLC1	Q9BX51	225 aa		13.65	□□□□□ -0.22
CIRBP-238	ENST00000592412	DNAH6	Q9C0G6	4158 aa		13.64	□□□□□ -0.23
CIRBP-238	ENST00000592412	MFNG	O00587	321 aa		13.64	□□□□□ -0.23
CIRBP-238	ENST00000592412	IL6R	P08887	468 aa	Predicted RBP	13.64	□□□□□ -0.23
CIRBP-238	ENST00000592412	MED22	Q15528	200 aa		13.64	□□□□□ -0.23
CIRBP-238	ENST00000592412	SLC16A13	Q7RTY0	426 aa		13.64	□□□□□ -0.23
CIRBP-238	ENST00000592412	RAB3C	Q96E17	227 aa		13.64	□□□□□ -0.23
CIRBP-238	ENST00000592412	FANCD2OS	Q96PS1	177 aa		13.64	□□□□□ -0.23
CIRBP-238	ENST00000592412		S4R3C0	116 aa		13.64	□□□□□ -0.23
CIRBP-238	ENST00000592412		A0A0J9YWU9	116 aa		13.63	□□□□□ -0.23
CIRBP-238	ENST00000592412	CXorf65	A6NEN9	183 aa		13.63	□□□□□ -0.23
CIRBP-238	ENST00000592412		A8MWP6	167 aa		13.63	□□□□□ -0.23
CIRBP-238	ENST00000592412	NDUFB8	O95169	186 aa		13.63	□□□□□ -0.23
CIRBP-238	ENST00000592412	GNB3	P16520	340 aa		13.63	□□□□□ -0.23
CIRBP-238	ENST00000592412	RPL30	P62888	115 aa	Known RBP	13.63	□□□□□ -0.23
CIRBP-238	ENST00000592412	TPBG	Q13641	420 aa		13.63	□□□□□ -0.23
CIRBP-238	ENST00000592412	ZNF57	Q68EA5	555 aa	Predicted RBP	13.63	□□□□□ -0.23
CIRBP-238	ENST00000592412	MMD2	Q8IY49	270 aa		13.63	□□□□□ -0.23
CIRBP-238	ENST00000592412	VKORC1L1	Q8N0U8	176 aa		13.63	□□□□□ -0.23
CIRBP-238	ENST00000592412	UFD1	Q92890	307 aa		13.63	□□□□□ -0.23
CIRBP-238	ENST00000592412	DUSP21	Q9H596	190 aa		13.63	□□□□□ -0.23
CIRBP-238	ENST00000592412	FBXL7	Q9UJT9	491 aa		13.63	□□□□□ -0.23
CIRBP-238	ENST00000592412	ZNF257	Q9Y2Q1	563 aa		13.63	□□□□□ -0.23
CIRBP-238	ENST00000592412	RBM7	Q9Y580	266 aa	Known RBP	13.63	□□□□□ -0.23
CIRBP-238	ENST00000592412	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	NPIPB5	A8MRT5	1133 aa		13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	RAB27B	O00194	218 aa		13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	RGS10	O43665	173 aa		13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	SCAF4	O95104	1147 aa	Known RBP	13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	IGLV2-14	P01704	120 aa		13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	CRHBP	P24387	322 aa		13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	KLK9	Q2XQG4	91 aa		13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	FAM209B	Q5JX69	171 aa		13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	HES5	Q5TA89	166 aa		13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	CLEC19A	Q6UXS0	136 aa		13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	RPP25L	Q8N5L8	163 aa	Known RBP	13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	OR52B4	Q8NGK2	314 aa		13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	GINS4	Q9BRT9	223 aa		13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412		Q9H521	79 aa		13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	KLK9	Q9UKQ9	250 aa		13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	RAB22A	Q9UL26	194 aa		13.62	□□□□□ -0.23
CIRBP-238	ENST00000592412	FCGR3B	O75015	233 aa		13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412	ACTL6B	O94805	426 aa		13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412	CALR	P27797	417 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412	ARL3	P36405	182 aa		13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412	BRWD1-AS2	P59051	145 aa		13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412	MRPS15	P82914	257 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412	TNFRSF9	Q07011	255 aa		13.61	□□□□□ -0.23
CIRBP-238	ENST00000592412	OR2B11	Q5JQS5	317 aa		13.61	□□□□□ -0.23

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