RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ZCCHC24Q8N2G6 241 aaKnown RBP12.96□□□□□ -0.33
MBD1-227ENST00000592060 OR10G4Q8NGN3 311 aa12.96□□□□□ -0.33
MBD1-227ENST00000592060 WFIKKN1Q96NZ8 548 aa12.96□□□□□ -0.33
MBD1-227ENST00000592060 TMEM140Q9NV12 185 aa12.96□□□□□ -0.33
MBD1-227ENST00000592060 CISD1Q9NZ45 108 aaKnown RBP12.96□□□□□ -0.33
MBD1-227ENST00000592060 GNG13Q9P2W3 67 aa12.96□□□□□ -0.33
MBD1-227ENST00000592060 TRAV3A0A0B4J244 114 aa12.96□□□□□ -0.34
MBD1-227ENST00000592060 LY86O95711 162 aa12.96□□□□□ -0.34
MBD1-227ENST00000592060 CRYBA1P05813 215 aa12.96□□□□□ -0.34
MBD1-227ENST00000592060 BCL2P10415 239 aa12.96□□□□□ -0.34
MBD1-227ENST00000592060 FOLR2P14207 255 aa12.96□□□□□ -0.34
MBD1-227ENST00000592060 DAOP14920 347 aa12.96□□□□□ -0.34
MBD1-227ENST00000592060 VDAC2P45880 294 aaPredicted RBP12.96□□□□□ -0.34
MBD1-227ENST00000592060 THBS3P49746 956 aa12.96□□□□□ -0.34
MBD1-227ENST00000592060 RBPJQ06330 500 aa12.96□□□□□ -0.34
MBD1-227ENST00000592060 AVPI1Q5T686 147 aa12.96□□□□□ -0.34
MBD1-227ENST00000592060 OR4A16Q8NH70 328 aa12.96□□□□□ -0.34
MBD1-227ENST00000592060 RND1Q92730 232 aa12.96□□□□□ -0.34
MBD1-227ENST00000592060 HIST1H2BAQ96A08 127 aa12.96□□□□□ -0.34
MBD1-227ENST00000592060 MLXQ9UH92 298 aa12.96□□□□□ -0.34
MBD1-227ENST00000592060 RPUSD1Q9UJJ7 312 aaKnown RBP12.96□□□□□ -0.34
MBD1-227ENST00000592060 PUS1Q9Y606 427 aaKnown RBP eCLIP12.96□□□□□ -0.34
MBD1-227ENST00000592060 MAP1LC3B2A6NCE7 125 aa12.95□□□□□ -0.34
MBD1-227ENST00000592060 FCN3O75636 299 aa12.95□□□□□ -0.34
MBD1-227ENST00000592060 IFNA17P01571 189 aa12.95□□□□□ -0.34
MBD1-227ENST00000592060 FGF8P55075 233 aaPredicted RBP12.95□□□□□ -0.34
MBD1-227ENST00000592060 MRPS11P82912 194 aaKnown RBP12.95□□□□□ -0.34
MBD1-227ENST00000592060 TLE1Q04724 770 aa12.95□□□□□ -0.34
MBD1-227ENST00000592060 DMRTC2Q8IXT2 367 aaPredicted RBP12.95□□□□□ -0.34
MBD1-227ENST00000592060 RPP25LQ8N5L8 163 aaKnown RBP12.95□□□□□ -0.34
MBD1-227ENST00000592060 ZNF383Q8NA42 475 aa12.95□□□□□ -0.34
MBD1-227ENST00000592060 VKORC1Q9BQB6 163 aa12.95□□□□□ -0.34
MBD1-227ENST00000592060 MAP1LC3BQ9GZQ8 125 aa12.95□□□□□ -0.34
MBD1-227ENST00000592060 LINC00312Q9Y6C7 94 aa12.95□□□□□ -0.34
MBD1-227ENST00000592060 SPTBN2O15020 2390 aa12.95□□□□□ -0.34
MBD1-227ENST00000592060 TRAV38-1A0A0B4J264 116 aa12.94□□□□□ -0.34
MBD1-227ENST00000592060 SHISA9B4DS77 424 aa12.94□□□□□ -0.34
MBD1-227ENST00000592060 H3BQ15 152 aa12.94□□□□□ -0.34
MBD1-227ENST00000592060 SLC25A48Q6ZT89 311 aaKnown RBP12.94□□□□□ -0.34
MBD1-227ENST00000592060 LYG1Q8N1E2 194 aa12.94□□□□□ -0.34
MBD1-227ENST00000592060 ADTRPQ96IZ2 230 aa12.94□□□□□ -0.34
MBD1-227ENST00000592060 NPCDR1Q9BY65 106 aa12.94□□□□□ -0.34
MBD1-227ENST00000592060 SAP30LQ9HAJ7 183 aa12.94□□□□□ -0.34
MBD1-227ENST00000592060 hADV38S2A0JD32 116 aa12.94□□□□□ -0.34
MBD1-227ENST00000592060 TMEM178BH3BS89 294 aa12.94□□□□□ -0.34
MBD1-227ENST00000592060 TMPRSS2O15393 492 aa12.94□□□□□ -0.34
MBD1-227ENST00000592060 GNG10P50151 68 aa12.94□□□□□ -0.34
MBD1-227ENST00000592060 PMS2P11Q13670 270 aa12.94□□□□□ -0.34
MBD1-227ENST00000592060 ZNF429Q86V71 674 aa12.94□□□□□ -0.34
MBD1-227ENST00000592060 Q8N7P7 452 aa12.94□□□□□ -0.34
MBD1-227ENST00000592060 ATMQ13315 3056 aa12.93□□□□□ -0.34
MBD1-227ENST00000592060 A0A1W2PPH5 198 aa12.93□□□□□ -0.34
MBD1-227ENST00000592060 C15orf61A6NNL5 157 aa12.93□□□□□ -0.34
MBD1-227ENST00000592060 TMPRSS3P57727 454 aa12.93□□□□□ -0.34
MBD1-227ENST00000592060 POU2AF1Q16633 256 aa12.93□□□□□ -0.34
MBD1-227ENST00000592060 NCMAPQ5T1S8 102 aa12.93□□□□□ -0.34
MBD1-227ENST00000592060 FAM90A2PQ658T7 463 aa12.93□□□□□ -0.34
MBD1-227ENST00000592060 CA5BP1Q8WTZ4 195 aa12.93□□□□□ -0.34
MBD1-227ENST00000592060 ZCCHC14Q8WYQ9 949 aaKnown RBP12.93□□□□□ -0.34
MBD1-227ENST00000592060 SLC25A10Q9UBX3 287 aaPredicted RBP12.93□□□□□ -0.34
MBD1-227ENST00000592060 RP1L1Q8IWN7 2480 aaPredicted RBP12.93□□□□□ -0.34
MBD1-227ENST00000592060 TRGV8A0A0C4DH27 118 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 A0A1W2PPE2 198 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 ZFP92A6NM28 416 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 PRSS46E5RG02 174 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 E7EQL1 145 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 TNFRSF13BO14836 293 aaPredicted RBP12.92□□□□□ -0.34
MBD1-227ENST00000592060 NDUFB7P17568 137 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 MEF2CQ06413 473 aaPredicted RBP12.92□□□□□ -0.34
MBD1-227ENST00000592060 HNF4GQ14541 408 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 C1orf87Q8N0U7 546 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 OR10A7Q8NGE5 316 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 ISOC2Q96AB3 205 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 RAB39BQ96DA2 213 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 NGBQ9NPG2 151 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 TCF19Q9Y242 345 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 WDR83OSQ9Y284 106 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 CTXND1A0A1B0GTU2 59 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 MBP02144 154 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 CEBPGP53567 150 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 FFAR4Q5NUL3 377 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 OR4A47Q6IF82 309 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 TMEM170AQ8WVE7 144 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 RNASE6Q93091 150 aaKnown RBP12.92□□□□□ -0.34
MBD1-227ENST00000592060 YPEL4Q96NS1 127 aa12.92□□□□□ -0.34
MBD1-227ENST00000592060 FOXA2Q9Y261 457 aaPredicted RBP12.92□□□□□ -0.34
MBD1-227ENST00000592060 YLPM1P49750 1951 aaKnown RBP12.92□□□□□ -0.34
MBD1-227ENST00000592060 ACACBO00763 2458 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 PPIAL4EA0A075B759 164 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 PPIAL4DF5H284 164 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 EIF3GO75821 320 aaKnown RBP eCLIP12.91□□□□□ -0.34
MBD1-227ENST00000592060 MT-ND4LP03901 98 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 PPIAL4FP0DN26 164 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 RAB13P51153 203 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 RPP30P78346 268 aaKnown RBP12.91□□□□□ -0.34
MBD1-227ENST00000592060 RNF212Q495C1 297 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 NEUROG1Q92886 237 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 LHX4Q969G2 390 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 RHOVQ96L33 236 aa12.91□□□□□ -0.34
MBD1-227ENST00000592060 SLC25A22Q9H936 323 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms