RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 HSPB7Q9UBY9 170 aa13.78□□□□□ -0.2
GCDH-212ENST00000590530 IGHV2-26A0A0B4J1V2 119 aa13.78□□□□□ -0.2
GCDH-212ENST00000590530 SYNGR2O43760 224 aa13.78□□□□□ -0.2
GCDH-212ENST00000590530 CHST1O43916 411 aa13.78□□□□□ -0.2
GCDH-212ENST00000590530 TMEM50AO95807 157 aa13.78□□□□□ -0.2
GCDH-212ENST00000590530 NQO2P16083 231 aa13.78□□□□□ -0.2
GCDH-212ENST00000590530 EWSR1Q01844 656 aaKnown RBP eCLIP13.78□□□□□ -0.2
GCDH-212ENST00000590530 AARDQ4LEZ3 155 aa13.78□□□□□ -0.2
GCDH-212ENST00000590530 DHRS7BQ6IAN0 325 aaPredicted RBP13.78□□□□□ -0.2
GCDH-212ENST00000590530 BAP18Q8IXM2 172 aa13.78□□□□□ -0.2
GCDH-212ENST00000590530 WSB1Q9Y6I7 421 aa13.78□□□□□ -0.2
GCDH-212ENST00000590530 A0A1W2PRD5 423 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 A0A1W2PRF3 423 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 A0A1W2PRM7 423 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 ENSAO43768 121 aaKnown RBP13.77□□□□□ -0.21
GCDH-212ENST00000590530 NXPH3O95157 252 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 CT45A6P0DMU7 189 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 CT45A5P0DMU8 189 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 CT45A7P0DMV0 189 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 USF1P22415 310 aaPredicted RBP13.77□□□□□ -0.21
GCDH-212ENST00000590530 REG1BP48304 166 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 PAX9P55771 341 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 TAS2R30P59541 319 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 ERVK-16P61578 105 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 TAGLNQ01995 201 aaKnown RBP13.77□□□□□ -0.21
GCDH-212ENST00000590530 BAXQ07812 192 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 LDLRAD2Q5SZI1 272 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 LRRC75A-AS1Q8N1F1 130 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 TMEM186Q96B77 213 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 MBD6Q96DN6 1003 aa13.77□□□□□ -0.21
GCDH-212ENST00000590530 ZNF469Q96JG9 3925 aaPredicted RBP13.77□□□□□ -0.21
GCDH-212ENST00000590530 hCG_1809904A0A1W2PP81 198 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 A0A1W2PPE2 198 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 A0A1W2PR64 198 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 A0A1W2PRV1 198 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 IGSF23A1L1A6 192 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 RNF223E7ERA6 249 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 MED6O75586 246 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 JTBO76095 146 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 CAV2P51636 162 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 RPL23AP62750 156 aaKnown RBP13.76□□□□□ -0.21
GCDH-212ENST00000590530 TNFRSF9Q07011 255 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 POU2AF1Q16633 256 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 VMO1Q7Z5L0 202 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 TMEM252Q8N6L7 170 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 OR10X1Q8NGY0 326 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 SIRPDQ9H106 197 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 PRRC2AP48634 2157 aaKnown RBP13.76□□□□□ -0.21
GCDH-212ENST00000590530 WNK2Q9Y3S1 2297 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 LINC00862A6NCI5 91 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 FAM24AA6NFZ4 105 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 M0R1W7 72 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 FOXH1O75593 365 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 PAX6P26367 422 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 RTL8BQ17RB0 113 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 ST6GALNAC6Q969X2 333 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 SMIM8Q96KF7 97 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 SLC25A32Q9H2D1 315 aa13.76□□□□□ -0.21
GCDH-212ENST00000590530 CELSR1Q9NYQ6 3014 aa13.75□□□□□ -0.21
GCDH-212ENST00000590530 CRYZL1O95825 349 aa13.75□□□□□ -0.21
GCDH-212ENST00000590530 IGLV1-47P01700 117 aa13.75□□□□□ -0.21
GCDH-212ENST00000590530 NMBP08949 121 aa13.75□□□□□ -0.21
GCDH-212ENST00000590530 RRASP10301 218 aa13.75□□□□□ -0.21
GCDH-212ENST00000590530 SLC25A16P16260 332 aa13.75□□□□□ -0.21
GCDH-212ENST00000590530 IL3RAP26951 378 aa13.75□□□□□ -0.21
GCDH-212ENST00000590530 RPL7L1Q6DKI1 246 aaKnown RBP13.75□□□□□ -0.21
GCDH-212ENST00000590530 UBAC2Q8NBM4 344 aa13.75□□□□□ -0.21
GCDH-212ENST00000590530 Q96MF0 132 aa13.75□□□□□ -0.21
GCDH-212ENST00000590530 TBX15Q96SF7 602 aa13.75□□□□□ -0.21
GCDH-212ENST00000590530 PCGF1Q9BSM1 259 aa13.75□□□□□ -0.21
GCDH-212ENST00000590530 CACFD1Q9UGQ2 172 aa13.75□□□□□ -0.21
GCDH-212ENST00000590530 CCDC168Q8NDH2 2452 aa13.75□□□□□ -0.21
GCDH-212ENST00000590530 TXNL1O43396 289 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 PRTN3P24158 256 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 DVL1P1P54792 670 aaPredicted RBP13.74□□□□□ -0.21
GCDH-212ENST00000590530 UBE2KP61086 200 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 OR5AN1Q8NGI8 311 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 BSCL2Q96G97 398 aaPredicted RBP13.74□□□□□ -0.21
GCDH-212ENST00000590530 CLEC7AQ9BXN2 247 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 MRPL20Q9BYC9 149 aaKnown RBP13.74□□□□□ -0.21
GCDH-212ENST00000590530 ARV1Q9H2C2 271 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 SLC35D1Q9NTN3 355 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 POLR3KQ9Y2Y1 108 aaPredicted RBP13.74□□□□□ -0.21
GCDH-212ENST00000590530 BORCS7-ASMTA0A0B4J1R7 106 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 RNASEK-C17orf49H0YIS7 233 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 HRASP01112 189 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 APOA2P02652 100 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 OR9G9P0C7N8 305 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 NHLH2Q02577 135 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 BEND2Q8NDZ0 799 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 WFDC11Q8NEX6 87 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 OR4P4Q8NGL7 312 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 SMIM3Q9BZL3 60 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 RBKSQ9H477 322 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 TMEM140Q9NV12 185 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 INSIG2Q9Y5U4 225 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 AUP1Q9Y679 476 aa13.74□□□□□ -0.21
GCDH-212ENST00000590530 ZANQ9Y493 2812 aa13.73□□□□□ -0.21
GCDH-212ENST00000590530 HOXB4P17483 251 aaPredicted RBP13.73□□□□□ -0.21
GCDH-212ENST00000590530 PRRX1P54821 245 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms