RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, human

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-211	ENST00000590098	SIGLEC8	Q9NYZ4	499 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098	PEMT	Q9UBM1	199 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098	PRELID3B	Q9Y3B1	194 aa		13.67	□□□□□ -0.22
PRKCSH-211	ENST00000590098	CSMD3	Q7Z407	3707 aa		13.66	□□□□□ -0.22
PRKCSH-211	ENST00000590098	IGKV1D-8	A0A087WSZ0	117 aa		13.66	□□□□□ -0.22
PRKCSH-211	ENST00000590098	FAM223B	A6NKX1	122 aa		13.66	□□□□□ -0.22
PRKCSH-211	ENST00000590098	FCGR3B	O75015	233 aa		13.66	□□□□□ -0.22
PRKCSH-211	ENST00000590098	TUSC2	O75896	110 aa		13.66	□□□□□ -0.22
PRKCSH-211	ENST00000590098	SAA1	P0DJI8	122 aa	Predicted RBP	13.66	□□□□□ -0.22
PRKCSH-211	ENST00000590098	ATP5G2	Q06055	141 aa		13.66	□□□□□ -0.22
PRKCSH-211	ENST00000590098	CDK10	Q15131	360 aa		13.66	□□□□□ -0.22
PRKCSH-211	ENST00000590098	FAM223A	Q8IWN6	122 aa		13.66	□□□□□ -0.22
PRKCSH-211	ENST00000590098	MMD2	Q8IY49	270 aa		13.66	□□□□□ -0.22
PRKCSH-211	ENST00000590098	SPATA25	Q9BR10	227 aa		13.66	□□□□□ -0.22
PRKCSH-211	ENST00000590098	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.66	□□□□□ -0.22
PRKCSH-211	ENST00000590098	AKIP1	Q9NQ31	210 aa		13.66	□□□□□ -0.22
PRKCSH-211	ENST00000590098	ELF5	Q9UKW6	265 aa	Predicted RBP	13.66	□□□□□ -0.22
PRKCSH-211	ENST00000590098	MRPS7	Q9Y2R9	242 aa	Known RBP	13.66	□□□□□ -0.22
PRKCSH-211	ENST00000590098	AIRE	O43918	545 aa		13.65	□□□□□ -0.22
PRKCSH-211	ENST00000590098	RBMXL2	O75526	392 aa	Known RBP	13.65	□□□□□ -0.22
PRKCSH-211	ENST00000590098	SLC22A5	O76082	557 aa		13.65	□□□□□ -0.22
PRKCSH-211	ENST00000590098	PRH1	P02810	166 aa		13.65	□□□□□ -0.22
PRKCSH-211	ENST00000590098	CD36	P16671	472 aa		13.65	□□□□□ -0.22
PRKCSH-211	ENST00000590098	EXOSC2	Q13868	293 aa	Known RBP	13.65	□□□□□ -0.22
PRKCSH-211	ENST00000590098	HACD4	Q5VWC8	232 aa		13.65	□□□□□ -0.22
PRKCSH-211	ENST00000590098	ZFAND6	Q6FIF0	208 aa		13.65	□□□□□ -0.22
PRKCSH-211	ENST00000590098	KCTD9	Q7L273	389 aa		13.65	□□□□□ -0.22
PRKCSH-211	ENST00000590098	OR2W1	Q9Y3N9	320 aa		13.65	□□□□□ -0.22
PRKCSH-211	ENST00000590098	LYST	Q99698	3801 aa		13.65	□□□□□ -0.22
PRKCSH-211	ENST00000590098	SMIM30	A4D0T7	59 aa		13.64	□□□□□ -0.23
PRKCSH-211	ENST00000590098	NFYA	P23511	347 aa	Predicted RBP	13.64	□□□□□ -0.23
PRKCSH-211	ENST00000590098	OR2B11	Q5JQS5	317 aa		13.64	□□□□□ -0.23
PRKCSH-211	ENST00000590098	SLC25A42	Q86VD7	318 aa		13.64	□□□□□ -0.23
PRKCSH-211	ENST00000590098	NR2C2AP	Q86WQ0	139 aa		13.64	□□□□□ -0.23
PRKCSH-211	ENST00000590098	NECAP1	Q8NC96	275 aa		13.64	□□□□□ -0.23
PRKCSH-211	ENST00000590098	OR2K2	Q8NGT1	345 aa		13.64	□□□□□ -0.23
PRKCSH-211	ENST00000590098	DCSTAMP	Q9H295	470 aa		13.64	□□□□□ -0.23
PRKCSH-211	ENST00000590098	TRBV9	A0A0B4J1U6	114 aa		13.63	□□□□□ -0.23
PRKCSH-211	ENST00000590098	IZUMO1R	A6ND01	250 aa		13.63	□□□□□ -0.23
PRKCSH-211	ENST00000590098	NOTO	A8MTQ0	251 aa		13.63	□□□□□ -0.23
PRKCSH-211	ENST00000590098	BMPR1B	O00238	502 aa		13.63	□□□□□ -0.23
PRKCSH-211	ENST00000590098	SCGN	O76038	276 aa		13.63	□□□□□ -0.23
PRKCSH-211	ENST00000590098	HLA-DQB1	P01920	261 aa		13.63	□□□□□ -0.23
PRKCSH-211	ENST00000590098	IFNA6	P05013	189 aa		13.63	□□□□□ -0.23
PRKCSH-211	ENST00000590098	HAGH	Q16775	308 aa		13.63	□□□□□ -0.23
PRKCSH-211	ENST00000590098	CNIH2	Q6PI25	160 aa		13.63	□□□□□ -0.23
PRKCSH-211	ENST00000590098	TTC9C	Q8N5M4	171 aa		13.63	□□□□□ -0.23
PRKCSH-211	ENST00000590098	THAP7	Q9BT49	309 aa	Predicted RBP	13.63	□□□□□ -0.23
PRKCSH-211	ENST00000590098	EDA2R	Q9HAV5	297 aa		13.63	□□□□□ -0.23
PRKCSH-211	ENST00000590098	RAB26	Q9ULW5	256 aa		13.63	□□□□□ -0.23
PRKCSH-211	ENST00000590098	RBMX2	Q9Y388	322 aa	Known RBP	13.63	□□□□□ -0.23
PRKCSH-211	ENST00000590098	STARD9	Q9P2P6	4700 aa		13.62	□□□□□ -0.23
PRKCSH-211	ENST00000590098	MRPS14	O60783	128 aa	Known RBP	13.62	□□□□□ -0.23
PRKCSH-211	ENST00000590098	GNG2	P59768	71 aa		13.62	□□□□□ -0.23
PRKCSH-211	ENST00000590098	GABARAPL2	P60520	117 aa		13.62	□□□□□ -0.23
PRKCSH-211	ENST00000590098	ZNF45	Q02386	682 aa		13.62	□□□□□ -0.23
PRKCSH-211	ENST00000590098	FAM209B	Q5JX69	171 aa		13.62	□□□□□ -0.23
PRKCSH-211	ENST00000590098	C10orf55	Q5SWW7	151 aa		13.62	□□□□□ -0.23
PRKCSH-211	ENST00000590098	OR4S2	Q8NH73	311 aa		13.62	□□□□□ -0.23
PRKCSH-211	ENST00000590098	VSTM2A	Q8TAG5	236 aa		13.62	□□□□□ -0.23
PRKCSH-211	ENST00000590098	NUDCD2	Q8WVJ2	157 aa		13.62	□□□□□ -0.23
PRKCSH-211	ENST00000590098	HSD17B10	Q99714	261 aa	Known RBP	13.62	□□□□□ -0.23
PRKCSH-211	ENST00000590098	OR51E2	Q9H255	320 aa		13.62	□□□□□ -0.23
PRKCSH-211	ENST00000590098	TXNL4B	Q9NX01	149 aa	Known RBP	13.62	□□□□□ -0.23
PRKCSH-211	ENST00000590098	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	DPPA5	A6NC42	116 aa		13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	TMEM235	A6NFC5	223 aa		13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	OR2J3	O76001	311 aa		13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	PSMB9	P28065	219 aa		13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	FGF9	P31371	208 aa	Predicted RBP	13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	MECP2	P51608	486 aa	Known RBP	13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	RPL30	P62888	115 aa	Known RBP	13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	C15orf32	Q32M92	178 aa		13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	UBE2U	Q5VVX9	321 aa		13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	TPRA1	Q86W33	373 aa		13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	VKORC1L1	Q8N0U8	176 aa		13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	DYNLRB2	Q8TF09	96 aa		13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	TCTEX1D2	Q8WW35	142 aa		13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	KCTD12	Q96CX2	325 aa	Known RBP	13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	OR2A7	Q96R45	310 aa		13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	DAPK2	Q9UIK4	370 aa		13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	SPATA2	Q9UM82	520 aa		13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	ZNF257	Q9Y2Q1	563 aa		13.61	□□□□□ -0.23
PRKCSH-211	ENST00000590098	IGKV1D-13	A0A0B4J2D9	117 aa		13.6	□□□□□ -0.23
PRKCSH-211	ENST00000590098	LCE6A	A0A183	80 aa		13.6	□□□□□ -0.23
PRKCSH-211	ENST00000590098	IGKV1-13	P0DP09	117 aa		13.6	□□□□□ -0.23
PRKCSH-211	ENST00000590098	FYTTD1	Q96QD9	318 aa	Known RBP	13.6	□□□□□ -0.23
PRKCSH-211	ENST00000590098	SLC2A8	Q9NY64	477 aa		13.6	□□□□□ -0.23
PRKCSH-211	ENST00000590098	ANXA10	Q9UJ72	324 aa		13.6	□□□□□ -0.23
PRKCSH-211	ENST00000590098	SSR3	Q9UNL2	185 aa		13.6	□□□□□ -0.23
PRKCSH-211	ENST00000590098	DNAH1	Q9P2D7	4330 aa		13.6	□□□□□ -0.23
PRKCSH-211	ENST00000590098	HMX3	A6NHT5	357 aa		13.59	□□□□□ -0.23
PRKCSH-211	ENST00000590098	TPPP	O94811	219 aa		13.59	□□□□□ -0.23
PRKCSH-211	ENST00000590098	KBTBD11	O94819	623 aa		13.59	□□□□□ -0.23
PRKCSH-211	ENST00000590098	IGLV2-14	P01704	120 aa		13.59	□□□□□ -0.23
PRKCSH-211	ENST00000590098	RPL27A	P46776	148 aa	Known RBP	13.59	□□□□□ -0.23
PRKCSH-211	ENST00000590098	CD81	P60033	236 aa		13.59	□□□□□ -0.23
PRKCSH-211	ENST00000590098	CD300E	Q496F6	205 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-211	ENST00000590098	LAX1	Q8IWV1	398 aa		13.59	□□□□□ -0.23
PRKCSH-211	ENST00000590098	FCGR1B	Q92637	280 aa		13.59	□□□□□ -0.23

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