RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 ADAMTSL5Q6ZMM2 481 aa12.85□□□□□ -0.35
CROCCP3-203ENST00000589964 KCTD9Q7L273 389 aa12.85□□□□□ -0.35
CROCCP3-203ENST00000589964 TPRA1Q86W33 373 aa12.85□□□□□ -0.35
CROCCP3-203ENST00000589964 ACOT12Q8WYK0 555 aa12.85□□□□□ -0.35
CROCCP3-203ENST00000589964 SNAPC3Q92966 411 aa12.85□□□□□ -0.35
CROCCP3-203ENST00000589964 TAS2R8Q9NYW2 309 aa12.85□□□□□ -0.35
CROCCP3-203ENST00000589964 ANXA10Q9UJ72 324 aa12.85□□□□□ -0.35
CROCCP3-203ENST00000589964 SPATA2Q9UM82 520 aa12.85□□□□□ -0.35
CROCCP3-203ENST00000589964 SELENOKQ9Y6D0 94 aa12.85□□□□□ -0.35
CROCCP3-203ENST00000589964 SMAD5-AS1Q9Y6J3 95 aa12.85□□□□□ -0.35
CROCCP3-203ENST00000589964 C13orf42A0A1B0GVH6 325 aa12.84□□□□□ -0.35
CROCCP3-203ENST00000589964 TEX22C9J3V5 150 aa12.84□□□□□ -0.35
CROCCP3-203ENST00000589964 TNFSF12O43508 249 aa12.84□□□□□ -0.35
CROCCP3-203ENST00000589964 IGLV1-51P01701 117 aa12.84□□□□□ -0.35
CROCCP3-203ENST00000589964 ZNF343Q6P1L6 599 aa12.84□□□□□ -0.35
CROCCP3-203ENST00000589964 TEX45Q8NA69 505 aa12.84□□□□□ -0.35
CROCCP3-203ENST00000589964 RSRP1Q9BUV0 290 aa12.84□□□□□ -0.35
CROCCP3-203ENST00000589964 AKIP1Q9NQ31 210 aa12.84□□□□□ -0.35
CROCCP3-203ENST00000589964 CCL28Q9NRJ3 127 aa12.84□□□□□ -0.35
CROCCP3-203ENST00000589964 S4R3C0 116 aa12.84□□□□□ -0.35
CROCCP3-203ENST00000589964 CGB1A6NKQ9 187 aa12.83□□□□□ -0.36
CROCCP3-203ENST00000589964 BMPR1BO00238 502 aa12.83□□□□□ -0.36
CROCCP3-203ENST00000589964 IL6RP08887 468 aaPredicted RBP12.83□□□□□ -0.36
CROCCP3-203ENST00000589964 RHOGP84095 191 aa12.83□□□□□ -0.36
CROCCP3-203ENST00000589964 VMA21Q3ZAQ7 101 aa12.83□□□□□ -0.36
CROCCP3-203ENST00000589964 CNIH2Q6PI25 160 aa12.83□□□□□ -0.36
CROCCP3-203ENST00000589964 ADTRPQ96IZ2 230 aa12.83□□□□□ -0.36
CROCCP3-203ENST00000589964 YTHDF1Q9BYJ9 559 aaKnown RBP12.83□□□□□ -0.36
CROCCP3-203ENST00000589964 ZMAT5Q9UDW3 170 aaKnown RBP12.83□□□□□ -0.36
CROCCP3-203ENST00000589964 H3BUA1 57 aa12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 HLA-AP01891 365 aaKnown RBP12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 CSN3P07498 182 aa12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 OR9G9P0C7N8 305 aa12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 AREGP15514 252 aa12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 LSM3P62310 102 aaKnown RBP12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 CDK10Q15131 360 aa12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 KCTD21Q4G0X4 260 aa12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 SSX9Q7RTT3 188 aa12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 TCTEX1D2Q8WW35 142 aa12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 PHB2Q99623 299 aa12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 DCUN1D5Q9BTE7 237 aa12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 DCSTAMPQ9H295 470 aa12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 Q9H521 79 aa12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 AUNIPQ9H7T9 357 aa12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 GAR1Q9NY12 217 aaKnown RBP12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 DMRT1Q9Y5R6 373 aa12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 DNAH7Q8WXX0 4024 aa12.82□□□□□ -0.36
CROCCP3-203ENST00000589964 TRAV3A0A0B4J244 114 aa12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 IGHV3-23P01764 117 aa12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 NHLRC4P0CG21 123 aaPredicted RBP12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 RRASP10301 218 aa12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 FCGR2CP31995 323 aa12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 DCTN2Q13561 401 aaKnown RBP12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 EXOSC2Q13868 293 aaKnown RBP12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 PUSL1Q8N0Z8 303 aaKnown RBP12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 BEST4Q8NFU0 473 aa12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 OSR1Q8TAX0 266 aaPredicted RBP12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 SECTM1Q8WVN6 248 aa12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 YIPF6Q96EC8 236 aa12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 OR4C12Q96R67 309 aa12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 THAP7Q9BT49 309 aaPredicted RBP12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 RANGRFQ9HD47 186 aaPredicted RBP12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 PEF1Q9UBV8 284 aaKnown RBP12.81□□□□□ -0.36
CROCCP3-203ENST00000589964 TENM2Q9NT68 2774 aa12.8□□□□□ -0.36
CROCCP3-203ENST00000589964 TRBV9A0A0B4J1U6 114 aa12.8□□□□□ -0.36
CROCCP3-203ENST00000589964 PPP5D1E7EU14 171 aa12.8□□□□□ -0.36
CROCCP3-203ENST00000589964 OR2J3O76001 311 aa12.8□□□□□ -0.36
CROCCP3-203ENST00000589964 REG1AP05451 166 aa12.8□□□□□ -0.36
CROCCP3-203ENST00000589964 CBX3Q13185 183 aa12.8□□□□□ -0.36
CROCCP3-203ENST00000589964 HOGA1Q86XE5 327 aa12.8□□□□□ -0.36
CROCCP3-203ENST00000589964 MFSD4AQ8N468 514 aa12.8□□□□□ -0.36
CROCCP3-203ENST00000589964 OR9G4Q8NGQ1 327 aa12.8□□□□□ -0.36
CROCCP3-203ENST00000589964 OR6Q1Q8NGQ2 317 aa12.8□□□□□ -0.36
CROCCP3-203ENST00000589964 OR13F1Q8NGS4 319 aa12.8□□□□□ -0.36
CROCCP3-203ENST00000589964 RCHY1Q96PM5 261 aa12.8□□□□□ -0.36
CROCCP3-203ENST00000589964 MPPED1O15442 326 aa12.79□□□□□ -0.36
CROCCP3-203ENST00000589964 BRI3O95415 125 aa12.79□□□□□ -0.36
CROCCP3-203ENST00000589964 IGHV4-30-4P0DP06 118 aa12.79□□□□□ -0.36
CROCCP3-203ENST00000589964 CD40LGP29965 261 aa12.79□□□□□ -0.36
CROCCP3-203ENST00000589964 RPS19P39019 145 aaKnown RBP12.79□□□□□ -0.36
CROCCP3-203ENST00000589964 RANBP1P43487 201 aa12.79□□□□□ -0.36
CROCCP3-203ENST00000589964 ETV7Q9Y603 341 aa12.79□□□□□ -0.36
CROCCP3-203ENST00000589964 A0A0G2JLM5 398 aa12.78□□□□□ -0.36
CROCCP3-203ENST00000589964 SULT1C2O00338 296 aa12.78□□□□□ -0.36
CROCCP3-203ENST00000589964 KBTBD11O94819 623 aa12.78□□□□□ -0.36
CROCCP3-203ENST00000589964 NDUFB8O95169 186 aa12.78□□□□□ -0.36
CROCCP3-203ENST00000589964 PPYP01298 95 aa12.78□□□□□ -0.36
CROCCP3-203ENST00000589964 CTXN2P0C2S0 81 aa12.78□□□□□ -0.36
CROCCP3-203ENST00000589964 RPA2P15927 270 aa12.78□□□□□ -0.36
CROCCP3-203ENST00000589964 ZP3P21754 424 aa12.78□□□□□ -0.36
CROCCP3-203ENST00000589964 FXYD4P59646 89 aa12.78□□□□□ -0.36
CROCCP3-203ENST00000589964 ARL6IP1Q15041 203 aa12.78□□□□□ -0.36
CROCCP3-203ENST00000589964 TMEM167AQ8TBQ9 72 aa12.78□□□□□ -0.36
CROCCP3-203ENST00000589964 CCDC140Q96MF4 163 aa12.78□□□□□ -0.36
CROCCP3-203ENST00000589964 FANCD2OSQ96PS1 177 aa12.78□□□□□ -0.36
CROCCP3-203ENST00000589964 FYTTD1Q96QD9 318 aaKnown RBP12.78□□□□□ -0.36
CROCCP3-203ENST00000589964 MECP2P51608 486 aaKnown RBP12.77□□□□□ -0.37
CROCCP3-203ENST00000589964 ARPC4P59998 168 aa12.77□□□□□ -0.37
CROCCP3-203ENST00000589964 ZNF818PQ6ZRF7 136 aa12.77□□□□□ -0.37
CROCCP3-203ENST00000589964 ANKRD13BQ86YJ7 626 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms