RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 FMODQ06828 376 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 ECH1Q13011 328 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 TMEM95Q3KNT9 176 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 THEM4Q5T1C6 240 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 OTPQ5XKR4 325 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 WDR25Q64LD2 544 aaPredicted RBP6.17□□□□□ -1.42
SMAD4-209ENST00000589941 UNQ6126/PRO20091Q6UXV3 157 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 ZNF841Q6ZN19 808 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 Q6ZR03 302 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 NOXO1Q8NFA2 376 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 OR2T6Q8NHC8 308 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 RXFP4Q8TDU9 374 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 CASTOR1Q8WTX7 329 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 SFT2D1Q8WV19 159 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 TMED6Q8WW62 240 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 C10orf35Q96D05 121 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 RAB3CQ96E17 227 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 C12orf57Q99622 126 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 NICN1Q9BSH3 213 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 EMC6Q9BV81 110 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 TMEM59Q9BXS4 323 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 ZNF702PQ9H963 129 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 SEBOXQ9HB31 216 aaPredicted RBP6.17□□□□□ -1.42
SMAD4-209ENST00000589941 SMCO4Q9NRQ5 59 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 OR5AC2Q9NZP5 309 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 CTSZQ9UBR2 303 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 KPTNQ9Y664 436 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 LHFPL6Q9Y693 200 aa6.17□□□□□ -1.42
SMAD4-209ENST00000589941 DYNC1H1Q14204 4646 aaKnown RBP6.17□□□□□ -1.42
SMAD4-209ENST00000589941 IGKV1-9A0A0C4DH69 117 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 IGHV3-64DA0A0J9YX35 117 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 A0A0U1RQV5 110 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 BTBD17A6NE02 478 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 C5orf52A6NGY3 159 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 ZNF705EA8MWA4 302 aaPredicted RBP6.16□□□□□ -1.42
SMAD4-209ENST00000589941 H3BUX3 64 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 UBE2CO00762 179 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 SOCS1O15524 211 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 PMP2P02689 132 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 CSN2P05814 226 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 GLAP06280 429 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 CTSDP07339 412 aaPredicted RBP6.16□□□□□ -1.42
SMAD4-209ENST00000589941 AKR1C4P17516 323 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 ARHGDIBP52566 201 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 F2RL1P55085 397 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 HIST1H3AP68431 136 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 KLRD1Q13241 179 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 RBM39Q14498 530 aaKnown RBP6.16□□□□□ -1.42
SMAD4-209ENST00000589941 HIST2H3PS2Q5TEC6 136 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 TMEM88Q6PEY1 159 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 DUX4L9Q6RFH8 374 aaPredicted RBP6.16□□□□□ -1.42
SMAD4-209ENST00000589941 GLIPR1L1Q6UWM5 242 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 HIST2H3AQ71DI3 136 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 KCTD9Q7L273 389 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 RTN4RL2Q86UN3 420 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.16□□□□□ -1.42
SMAD4-209ENST00000589941 LINC00346Q8IVM7 164 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 C20orf196Q8IYI0 205 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 LRTM2Q8N967 370 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 UBAC2Q8NBM4 344 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 CHST4Q8NCG5 386 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 BHLHE23Q8NDY6 225 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 TMEM104Q8NE00 496 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 OR8B12Q8NGG6 310 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 OR8B3Q8NGG8 313 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 OR13C9Q8NGT0 318 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 OR5H2Q8NGV7 314 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 OR6X1Q8NH79 312 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 SLC25A40Q8TBP6 338 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 OR10C1Q96KK4 312 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 OR8B2Q96RD0 313 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 MICU1Q9BPX6 476 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 URM1Q9BTM9 101 aaKnown RBP6.16□□□□□ -1.42
SMAD4-209ENST00000589941 OR2J1Q9GZK6 312 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 HIPK2Q9H2X6 1198 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 PLEKHA2Q9HB19 425 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 CLN8Q9UBY8 286 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 CACFD1Q9UGQ2 172 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 V9GYS6 101 aa6.16□□□□□ -1.42
SMAD4-209ENST00000589941 CRYM-AS1A6NIL9 109 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 DHRS7CA6NNS2 312 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 FAM25EA8MYX2 175 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 C9JQL5 133 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 DEDDO75618 318 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 ADAP1O75689 374 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 VAMP5O95183 116 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 LHBP01229 141 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 ACAA1P09110 424 aaPredicted RBP6.15□□□□□ -1.42
SMAD4-209ENST00000589941 FBP1P09467 338 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 SEC11BP0C7V7 166 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 SPP1P10451 314 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 FKBP2P26885 142 aaKnown RBP6.15□□□□□ -1.42
SMAD4-209ENST00000589941 OTX1P32242 354 aaPredicted RBP6.15□□□□□ -1.42
SMAD4-209ENST00000589941 OR3A4PP47883 348 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 LSM6P62312 80 aaKnown RBP6.15□□□□□ -1.42
SMAD4-209ENST00000589941 GRB2P62993 217 aaKnown RBP6.15□□□□□ -1.42
SMAD4-209ENST00000589941 PDZK1IP1Q13113 114 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 PEA15Q15121 130 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 C10orf128Q5T292 105 aa6.15□□□□□ -1.42
SMAD4-209ENST00000589941 RPL7L1Q6DKI1 246 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms