RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 DHODHQ02127 395 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 PSG5Q15238 335 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 C5orf64Q2M2E5 130 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 SP6Q3SY56 376 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 ZNF585BQ52M93 769 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 PRIMA1Q86XR5 153 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 Q8N9W7 124 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 GALNT14Q96FL9 552 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 PRSS22Q9GZN4 317 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 NUDT15Q9NV35 164 aa10.85□□□□□ -0.67
VMP1-210ENST00000589823 METTL1Q9UBP6 276 aaKnown RBP10.85□□□□□ -0.67
VMP1-210ENST00000589823 TRAV6A0A075B6T7 132 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 SRRM4A7MD48 611 aaKnown RBP10.84□□□□□ -0.67
VMP1-210ENST00000589823 ATG12O94817 140 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 H2AFB2P0C5Z0 115 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 VSIG10L2P0DP72 767 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 UCP1P25874 307 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 UBE2KP61086 200 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 ARSJQ5FYB0 599 aaPredicted RBP10.84□□□□□ -0.67
VMP1-210ENST00000589823 PLET1Q6UQ28 207 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 SSX9Q7RTT3 188 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 NRARPQ7Z6K4 114 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 FAM71E2Q8N5Q1 922 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 TEX45Q8NA69 505 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 DUSP18Q8NEJ0 188 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 DMBX1Q8NFW5 382 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 VSTM2AQ8TAG5 236 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 R3HDM4Q96D70 268 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 RHOVQ96L33 236 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 TMEM222Q9H0R3 208 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 FBXL15Q9H469 300 aa10.84□□□□□ -0.67
VMP1-210ENST00000589823 RANBP3Q9H6Z4 567 aaPredicted RBP10.84□□□□□ -0.67
VMP1-210ENST00000589823 SFT2D2O95562 160 aa10.83□□□□□ -0.68
VMP1-210ENST00000589823 PTTG1O95997 202 aa10.83□□□□□ -0.68
VMP1-210ENST00000589823 IGLV2-23P01705 113 aa10.83□□□□□ -0.68
VMP1-210ENST00000589823 OR4E1P0C645 316 aa10.83□□□□□ -0.68
VMP1-210ENST00000589823 SAA1P0DJI8 122 aaPredicted RBP10.83□□□□□ -0.68
VMP1-210ENST00000589823 ANXA7P20073 488 aaKnown RBP10.83□□□□□ -0.68
VMP1-210ENST00000589823 PPP1R1AQ13522 171 aa10.83□□□□□ -0.68
VMP1-210ENST00000589823 C4orf46Q504U0 113 aa10.83□□□□□ -0.68
VMP1-210ENST00000589823 C9orf152Q5JTZ5 239 aa10.83□□□□□ -0.68
VMP1-210ENST00000589823 LIN54Q6MZP7 749 aa10.83□□□□□ -0.68
VMP1-210ENST00000589823 ZNF695Q8IW36 515 aa10.83□□□□□ -0.68
VMP1-210ENST00000589823 VKORC1L1Q8N0U8 176 aa10.83□□□□□ -0.68
VMP1-210ENST00000589823 SIGLEC9Q9Y336 463 aa10.83□□□□□ -0.68
VMP1-210ENST00000589823 PIGBOS1A0A0B4J2F0 54 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 SH2D7A6NKC9 451 aaPredicted RBP10.82□□□□□ -0.68
VMP1-210ENST00000589823 MARCH11A6NNE9 402 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 CREBL2O60519 120 aaPredicted RBP10.82□□□□□ -0.68
VMP1-210ENST00000589823 OR2A4O95047 310 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 KRASP01116 189 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 HLA-AP01891 365 aaKnown RBP10.82□□□□□ -0.68
VMP1-210ENST00000589823 AMY1AP04745 511 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 G6PCP35575 357 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 BLCAPP62952 87 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 SUPT4H1P63272 117 aaKnown RBP10.82□□□□□ -0.68
VMP1-210ENST00000589823 SRPXP78539 464 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 TMEM187Q14656 261 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 POU2AF1Q16633 256 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 PPP1R27Q86WC6 154 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 RNASE11Q8TAA1 199 aaKnown RBP10.82□□□□□ -0.68
VMP1-210ENST00000589823 CASTOR1Q8WTX7 329 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 GLYATL2Q8WU03 294 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 OR2A7Q96R45 310 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 CLCC1Q96S66 551 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 ALX4Q9H161 411 aaPredicted RBP10.82□□□□□ -0.68
VMP1-210ENST00000589823 BEX1Q9HBH7 125 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 SETD2Q9BYW2 2564 aaPredicted RBP10.82□□□□□ -0.68
VMP1-210ENST00000589823 JMJD1CQ15652 2540 aa10.82□□□□□ -0.68
VMP1-210ENST00000589823 C9orf170A2RU37 121 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 TSPAN9O75954 239 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 KBTBD11O94819 623 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 NDUFA7O95182 113 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 CDS2O95674 445 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 IGKV1-39P01597 117 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 HLA-DRB1P01911 266 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 IGKV1D-39P04432 117 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 CRYGBP07316 175 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 AKR1C2P52895 323 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 RAG2P55895 527 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 RIPPLY3P57055 190 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 RAB25P57735 213 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 RGS21Q2M5E4 152 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 TMEM268Q5VZI3 342 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 OR4A47Q6IF82 309 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 Q6ZSV7 163 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 LYG2Q86SG7 212 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 PUSL1Q8N0Z8 303 aaKnown RBP10.81□□□□□ -0.68
VMP1-210ENST00000589823 LGI3Q8N145 548 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 OR4A5Q8NH83 315 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 OR2T6Q8NHC8 308 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 TMEM167AQ8TBQ9 72 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 RBPMSQ93062 196 aaKnown RBP10.81□□□□□ -0.68
VMP1-210ENST00000589823 IL22RA2Q969J5 263 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 RRNAD1Q96FB5 475 aaKnown RBP10.81□□□□□ -0.68
VMP1-210ENST00000589823 ZNF702PQ9H963 129 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 TPSG1Q9NRR2 321 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 TMEM140Q9NV12 185 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 BET1LQ9NYM9 111 aa10.81□□□□□ -0.68
VMP1-210ENST00000589823 NF1P21359 2839 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms