RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 ST6GALNAC6Q969X2 333 aa12.5□□□□□ -0.41
SMARCA4-214ENST00000589677 C7orf71A4D174 169 aa12.5□□□□□ -0.41
SMARCA4-214ENST00000589677 C2CD4DB7Z1M9 353 aa12.5□□□□□ -0.41
SMARCA4-214ENST00000589677 A0A0J9YW62 118 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 EMP1P54849 157 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 SOX8P57073 446 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 TMEM92Q6UXU6 159 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 SFTPA1Q8IWL2 248 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 OR51G1Q8NGK1 321 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 TCF19Q9Y242 345 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 TRAV17A0A0B4J275 112 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 SHISA7A6NL88 538 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 TMPRSS2O15393 492 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 IL6RP08887 468 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 SSTR5P35346 364 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 GNB2P62879 340 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 DRAM1Q8N682 238 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 NUDT10Q8NFP7 164 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 C1QTNF9BB2RNN3 333 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 ZNF324O75467 553 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 TFPI2P48307 235 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 MMDQ15546 238 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 AMMECR1LQ6DCA0 310 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 UBALD2Q8IYN6 164 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 FAM19A2Q8N3H0 131 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 FAM169BQ8N8A8 192 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 MBD3L1Q8WWY6 194 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 GDF15Q99988 308 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 PRDM14Q9GZV8 571 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 MYO7AQ13402 2215 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 H3BUT2 72 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 SPINT1O43278 529 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 SRSF4Q08170 494 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 ASCL5Q7RTU5 278 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 OR4D5Q8NGN0 318 aa12.49□□□□□ -0.41
SMARCA4-214ENST00000589677 SCO2A0A1W2PP80 73 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 K7EQS6 105 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 CA1P00915 261 aaPredicted RBP12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 COX7A1P24310 79 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 ATP5G3P48201 142 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 IGLV3-21P80748 117 aaPredicted RBP12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 CCL17Q92583 94 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 GFI1Q99684 422 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 LOC101059948A0A1B0GTJ6 334 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 Q6ZS52 159 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 A0A1W2PPE3 182 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 RBFOX2O43251 390 aaKnown RBP eCLIP12.48□□□□□ -0.413e-7■■□□□ 14.3
SMARCA4-214ENST00000589677 FOXA3P55318 350 aaPredicted RBP12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 CCL20P78556 96 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 FBXW9Q5XUX1 488 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 LRTM2Q8N967 370 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 TNFRSF19Q9NS68 423 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 LGALS7P47929 136 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 RPL8P62917 257 aaKnown RBP12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 HIST1H1AQ02539 215 aaPredicted RBP12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 ZNF146Q15072 292 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 TMEM108Q6UXF1 575 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 ZNF788Q6ZQV5 615 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 C1QL2Q7Z5L3 287 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 MDP1Q86V88 176 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 OR4X2Q8NGF9 303 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 GNB1LQ9BYB4 327 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 MEGF9Q9H1U4 602 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 ZNF257Q9Y2Q1 563 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 CCDC88CQ9P219 2028 aa12.48□□□□□ -0.41
SMARCA4-214ENST00000589677 WFDC1Q9HC57 220 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 WNT16Q9UBV4 365 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 OR11H12B2RN74 326 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 CEACAM1P13688 526 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 C10orf128Q5T292 105 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 OR11H1Q8NG94 326 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 OR11H2Q8NH07 326 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 INSIG2Q9Y5U4 225 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 TRAV1-1A0A0B4J248 108 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 A0A1B0GW15 77 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 H7C2G1 150 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 C2orf83Q53S99 150 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 ZNF714Q96N38 554 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 GREM1O60565 184 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 SCGB1A1P11684 91 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 MPV17P39210 176 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 ADIPOQQ15848 244 aa12.47□□□□□ -0.41
SMARCA4-214ENST00000589677 C17orf51A8MQB3 221 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 COX5BP10606 129 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 RPL27AP46776 148 aaKnown RBP12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 SEC11AP67812 179 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 KRTCAP3Q53RY4 240 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 TCF23Q7RTU1 214 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 ABHD12Q8N2K0 398 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 TMEM208Q9BTX3 173 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 WDR54Q9H977 334 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 SPAG17Q6Q759 2223 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 IGHV1OR15-9A0A0B4J2B8 117 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 TNFSF15O95150 251 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 MST1P26927 711 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 BHLHA15Q7RTS1 189 aaPredicted RBP12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 ORAOV1Q8WV07 137 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 ST20Q9HBF5 79 aa12.46□□□□□ -0.41
SMARCA4-214ENST00000589677 JPT1Q9UK76 154 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms