RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 PGAM2P15259 253 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 PSMB8P28062 276 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 CEACAM6P40199 344 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 ZNF616Q08AN1 781 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 ZNF79Q15937 498 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 PRAMEF5Q5TYX0 476 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 CCDC144NLQ6NUI1 221 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 ZNF880Q6PDB4 577 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 CEMP1Q6PRD7 247 aaPredicted RBP4.66□□□□□ -1.66
VPS25-204ENST00000589577 CMTM1Q8IZ96 169 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 ABHD12Q8N2K0 398 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 MFSD4AQ8N468 514 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 GVQW1Q8N7I0 195 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 POC5Q8NA72 575 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 OR10V1Q8NGI7 309 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 OR1N2Q8NGR9 330 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 OR9G1Q8NH87 305 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 OR1L1Q8NH94 360 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 ZFAND1Q8TCF1 268 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 ARPC1AQ92747 370 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 SNAPC3Q92966 411 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 TOMM40LQ969M1 308 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 YPEL2Q96QA6 119 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 S1PR3Q99500 378 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 SOSTQ9BQB4 213 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 ABHD14AQ9BUJ0 271 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 TMEM133Q9H2Q1 129 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 GFOD1Q9NXC2 390 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 COPZ2Q9P299 210 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 DPM3Q9P2X0 92 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 ELF5Q9UKW6 265 aaPredicted RBP4.66□□□□□ -1.66
VPS25-204ENST00000589577 C14orf166Q9Y224 244 aaKnown RBP4.66□□□□□ -1.66
VPS25-204ENST00000589577 MYCBP2O75592 4640 aa4.66□□□□□ -1.66
VPS25-204ENST00000589577 IGHV3-43A0A0B4J1X8 118 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 FAM240BA0A1B0GVZ2 78 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 NPIPB11E5RHQ5 1161 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 LY6LH3BQJ8 138 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 J3QRK9 145 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 M0QYG6 137 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 RAB29O14966 203 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 LYRM1O43325 122 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 TXNL1O43396 289 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 IGHG4P01861 327 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 ELANEP08246 267 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 IGHV3-43DP0DP04 118 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 NAT1P18440 290 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 FCGR2CP31995 323 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 PPP1CCP36873 323 aaKnown RBP4.65□□□□□ -1.67
VPS25-204ENST00000589577 GPR12P47775 334 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 RFX2P48378 723 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 GNG10P50151 68 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 SLURP1P55000 103 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 FXYD4P59646 89 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 RUNX1Q01196 453 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 CATR1Q13166 79 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 RBMS2Q15434 407 aaKnown RBP4.65□□□□□ -1.67
VPS25-204ENST00000589577 UTF1Q5T230 341 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 TPTE2P1Q5T6R2 138 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 ZNF575Q86XF7 245 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 FOXRED2Q8IWF2 684 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 CCDC71LQ8N9Z2 235 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 UBALD1Q8TB05 177 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 SECTM1Q8WVN6 248 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 RPEQ96AT9 228 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 OR5B12Q96R08 314 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 SLC25A21Q9BQT8 299 aaPredicted RBP4.65□□□□□ -1.67
VPS25-204ENST00000589577 ZNF2Q9BSG1 426 aaPredicted RBP4.65□□□□□ -1.67
VPS25-204ENST00000589577 ALX4Q9H161 411 aaPredicted RBP4.65□□□□□ -1.67
VPS25-204ENST00000589577 LINC00574Q9H8X3 128 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 RDH8Q9NYR8 311 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 PIPOXQ9P0Z9 390 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 ANAPC10Q9UM13 185 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 RBMX2Q9Y388 322 aaKnown RBP4.65□□□□□ -1.67
VPS25-204ENST00000589577 PRELID3BQ9Y3B1 194 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 OR2W1Q9Y3N9 320 aa4.65□□□□□ -1.67
VPS25-204ENST00000589577 TRBV6-7A0A0A0MS04 114 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 LEUTXA8MZ59 168 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 OOSP1A8MZH6 123 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 C15orf65H3BRN8 121 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 AP4M1O00189 453 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 ITGB1BP1O14713 200 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 ST8SIA5O15466 376 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 FGF16O43320 207 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 PPYP01298 95 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 IGLV1-51P01701 117 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 APOA2P02652 100 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 CD74P04233 296 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 RLN1P04808 185 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 OR8U9P0C7N5 309 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 ANXA3P12429 323 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 NFYAP23511 347 aaPredicted RBP4.64□□□□□ -1.67
VPS25-204ENST00000589577 CD34P28906 385 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 TAS2R31P59538 309 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 TAGLNQ01995 201 aaKnown RBP4.64□□□□□ -1.67
VPS25-204ENST00000589577 SURF2Q15527 256 aaPredicted RBP4.64□□□□□ -1.67
VPS25-204ENST00000589577 BAK1Q16611 211 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 C17orf58Q2M2W7 97 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 MORN2Q502X0 79 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 IGSF11Q5DX21 431 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 LY6G6FQ5SQ64 297 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms