RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 hADV38S2A0JD32 116 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 DEFB108AA8MXU0 73 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 SOX15O60248 233 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 FCGR3BO75015 233 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 CYB5R3P00387 301 aaPredicted RBP8.22□□□□□ -1.09
VPS25-202ENST00000589219 PAX6P26367 422 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 NPBWR1P48145 328 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 BRWD1-AS2P59051 145 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 KRTAP10-9P60411 292 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 RPP30P78346 268 aaKnown RBP8.22□□□□□ -1.09
VPS25-202ENST00000589219 MEF2CQ06413 473 aaPredicted RBP8.22□□□□□ -1.09
VPS25-202ENST00000589219 LTC4SQ16873 150 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 PRAMEF5Q5TYX0 476 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 FAM53AQ6NSI3 398 aaPredicted RBP8.22□□□□□ -1.09
VPS25-202ENST00000589219 SPSB3Q6PJ21 355 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 SPNS3Q6ZMD2 512 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 THNSL2Q86YJ6 484 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 OR52E5Q8NH55 327 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 S1PR3Q99500 378 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 WDR61Q9GZS3 305 aaKnown RBP8.22□□□□□ -1.09
VPS25-202ENST00000589219 SLC35B3Q9H1N7 401 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 UBE2L5PA0A1B0GUS4 154 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 CEBPZOSA8MTT3 80 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 C9JQL5 133 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 RBMXL2O75526 392 aaKnown RBP8.21□□□□□ -1.1
VPS25-202ENST00000589219 GYPAP02724 150 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 HSPB1P04792 205 aaKnown RBP8.21□□□□□ -1.1
VPS25-202ENST00000589219 NQO2P16083 231 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 SPCS3P61009 180 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 ARL16Q0P5N6 197 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 PDLIM3Q53GG5 364 aaPredicted RBP8.21□□□□□ -1.1
VPS25-202ENST00000589219 TMEM41BQ5BJD5 291 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 ZNF506Q5JVG8 444 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 NCR3LG1Q68D85 454 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 C22orf34Q6ZV56 151 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 TCF23Q7RTU1 214 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 ZNF439Q8NDP4 499 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 DDB2Q92466 427 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 TAF15Q92804 592 aaKnown RBP eCLIP8.21□□□□□ -1.1
VPS25-202ENST00000589219 OR4C12Q96R67 309 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 GAL3ST2Q9H3Q3 398 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 SAP30LQ9HAJ7 183 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 FBXO7Q9Y3I1 522 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 LINC00312Q9Y6C7 94 aa8.21□□□□□ -1.1
VPS25-202ENST00000589219 HIVEP1P15822 2718 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 RBFOX3A6NFN3 312 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 NUPL2O15504 423 aaKnown RBP8.2□□□□□ -1.1
VPS25-202ENST00000589219 IFNA1P01562 189 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 MBP02144 154 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 ARG1P05089 322 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 SELLP14151 372 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 RHEBQ15382 184 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 EFNB3Q15768 340 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 POU2AF1Q16633 256 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 VWC2Q2TAL6 325 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 FBXL19-AS1Q494R0 122 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 KHDC3LQ587J8 217 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 FAM201AQ5SY85 155 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 NCMAPQ5T1S8 102 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 ADAM5Q6NVV9 412 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 CENPVQ7Z7K6 275 aaPredicted RBP8.2□□□□□ -1.1
VPS25-202ENST00000589219 FAM216BQ8N7L0 139 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 OR10P1Q8NGE3 313 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 OR10G4Q8NGN3 311 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 OR4A16Q8NH70 328 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 MBD3L1Q8WWY6 194 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 RAB39BQ96DA2 213 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 CCL13Q99616 98 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 DYNLRB1Q9NP97 96 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 SMCO4Q9NRQ5 59 aa8.2□□□□□ -1.1
VPS25-202ENST00000589219 RPUSD1Q9UJJ7 312 aaKnown RBP8.2□□□□□ -1.1
VPS25-202ENST00000589219 PPIAL4EA0A075B759 164 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 SAA2-SAA4A0A096LPE2 208 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 LOC102723971A0A1B0GUV8 181 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 PMS2P5A8MQ11 134 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 C17orf112F2Z3M2 114 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 PPIAL4DF5H284 164 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 GPR37O15354 613 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 SLC31A2O15432 143 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 NDUFS6O75380 124 aaKnown RBP8.19□□□□□ -1.1
VPS25-202ENST00000589219 SAA2P0DJI9 122 aaPredicted RBP8.19□□□□□ -1.1
VPS25-202ENST00000589219 PPIAL4FP0DN26 164 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 DAOP14920 347 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 TAGLN2P37802 199 aaKnown RBP8.19□□□□□ -1.1
VPS25-202ENST00000589219 GNB2P62879 340 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 MRPS11P82912 194 aaKnown RBP8.19□□□□□ -1.1
VPS25-202ENST00000589219 FLI1Q01543 452 aaPredicted RBP8.19□□□□□ -1.1
VPS25-202ENST00000589219 HFEQ30201 348 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 RPL39P5Q59GN2 51 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 OR8G2PQ6IF36 304 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 FAM71F2Q6NXP2 309 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 ZNF429Q86V71 674 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 CBLN2Q8IUK8 224 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 DEFB108BQ8NET1 73 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 CLDND2Q8NHS1 167 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 SFT2D1Q8WV19 159 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 RSG1Q9BU20 258 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 QTRT1Q9BXR0 403 aaKnown RBP8.19□□□□□ -1.1
VPS25-202ENST00000589219 TMEM140Q9NV12 185 aa8.19□□□□□ -1.1
VPS25-202ENST00000589219 SLC25A10Q9UBX3 287 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms