RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 ZNF665Q9H7R5 613 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 PARD6AQ9NPB6 346 aa6.15□□□□□ -1.42
ZNF540-206ENST00000589117 ZG16O60844 167 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 FCGR3BO75015 233 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 EIF3GO75821 320 aaKnown RBP eCLIP6.15□□□□□ -1.43
ZNF540-206ENST00000589117 OPN1MWP04001 364 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 FBP1P09467 338 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 OPN1MW2P0DN77 364 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 OPN1MW3P0DN78 364 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 IRF2P14316 349 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 NQO2P16083 231 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 LORP23490 312 aaPredicted RBP6.15□□□□□ -1.43
ZNF540-206ENST00000589117 DUTP33316 252 aaKnown RBP6.15□□□□□ -1.43
ZNF540-206ENST00000589117 SRSF6Q13247 344 aaKnown RBP6.15□□□□□ -1.43
ZNF540-206ENST00000589117 TMEM241Q24JQ0 296 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 ZNF674Q2M3X9 581 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 TMEM30BQ3MIR4 351 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 KHDC1LQ5JSQ8 128 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 FFAR4Q5NUL3 377 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 C1orf185Q5T7R7 199 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 PRAMEF5Q5TYX0 476 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 SSX8Q7RTT4 187 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 C1orf87Q8N0U7 546 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 RPP25LQ8N5L8 163 aaKnown RBP6.15□□□□□ -1.43
ZNF540-206ENST00000589117 TPRX1Q8N7U7 411 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.15□□□□□ -1.43
ZNF540-206ENST00000589117 ADTRPQ96IZ2 230 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 KCNIP2Q9NS61 270 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 NAT8Q9UHE5 227 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 GAB2Q9UQC2 676 aa6.15□□□□□ -1.43
ZNF540-206ENST00000589117 IGKV1D-17A0A075B6S4 117 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 TRGV10A0A0A0MS01 117 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 IGHV3-43A0A0B4J1X8 118 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 SMCO3A2RU48 225 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 F2RL2O00254 374 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 IFNA10P01566 189 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 IGHV3-43DP0DP04 118 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 WT1P19544 449 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-206ENST00000589117 S100PP25815 95 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 CD1BP29016 333 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 FGF8P55075 233 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-206ENST00000589117 KIAA0141Q14154 515 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-206ENST00000589117 ELOBQ15370 118 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 LTC4SQ16873 150 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 VWC2Q2TAL6 325 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 Q6ZS92 163 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 GCSAMQ8N6F7 178 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 OR4S2Q8NH73 311 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 CA5BP1Q8WTZ4 195 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 SMIM7Q9BQ49 75 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 NPCDR1Q9BY65 106 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 VSIRQ9H7M9 311 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 HEYLQ9NQ87 328 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-206ENST00000589117 IL19Q9UHD0 177 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 A0A1W2PPV4 95 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 LINC00473A8K010 186 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 M0R1X1 148 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 SPRY3O43610 288 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 MALP21145 153 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 GATA4P43694 442 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 RAB31Q13636 194 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 ZNF726P1Q15940 193 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 AARDQ4LEZ3 155 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 FAM90A2PQ658T7 463 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 MOGAT3Q86VF5 341 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 TMPRSS5Q9H3S3 457 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 SDF2L1Q9HCN8 221 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 ENY2Q9NPA8 101 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 RNF7Q9UBF6 113 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 URGCP-MRPS24S4R325 110 aa6.14□□□□□ -1.43
ZNF540-206ENST00000589117 WISP2O76076 250 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 LHBP01229 141 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 IGHV2-5P01817 119 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 CD55P08174 381 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 S100A2P29034 98 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 BRWD1-AS2P59051 145 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 RTP5Q14D33 572 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 PDLIM3Q53GG5 364 aaPredicted RBP6.13□□□□□ -1.43
ZNF540-206ENST00000589117 NCR3LG1Q68D85 454 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 TEPPQ6URK8 271 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 BCL6BQ8N143 479 aaPredicted RBP6.13□□□□□ -1.43
ZNF540-206ENST00000589117 FAM210BQ96KR6 192 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 YPEL4Q96NS1 127 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 OR5B12Q96R08 314 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 TXNDC17Q9BRA2 123 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 FAM234AQ9H0X4 552 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 CALYQ9NYX4 217 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 URB1O60287 2271 aaKnown RBP6.13□□□□□ -1.43
ZNF540-206ENST00000589117 IGLV3-9A0A075B6K5 115 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 KBTBD11-OT1A0A1B0GTJ5 212 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 PMS2P5A8MQ11 134 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 PDE6DO43924 150 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 HRASP01112 189 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 CDC34P49427 236 aaPredicted RBP6.13□□□□□ -1.43
ZNF540-206ENST00000589117 THBS3P49746 956 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 TNFAIP6P98066 277 aaPredicted RBP6.13□□□□□ -1.43
ZNF540-206ENST00000589117 TLE1Q04724 770 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 TMEM249Q2WGJ8 235 aa6.13□□□□□ -1.43
ZNF540-206ENST00000589117 ZNF474Q6S9Z5 364 aaPredicted RBP6.13□□□□□ -1.43
ZNF540-206ENST00000589117 TMEM108Q6UXF1 575 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms