RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 TMEM272A0A1B0GTI8 110 aa10.54□□□□□ -0.72
VMP1-209ENST00000588915 GGCTO75223 188 aaKnown RBP10.54□□□□□ -0.72
VMP1-209ENST00000588915 CRYZL1O95825 349 aa10.54□□□□□ -0.72
VMP1-209ENST00000588915 CD7P09564 240 aa10.54□□□□□ -0.72
VMP1-209ENST00000588915 CLDN12P56749 244 aa10.54□□□□□ -0.72
VMP1-209ENST00000588915 CDK10Q15131 360 aa10.54□□□□□ -0.72
VMP1-209ENST00000588915 GPHB5Q86YW7 130 aa10.54□□□□□ -0.72
VMP1-209ENST00000588915 H1FOOQ8IZA3 346 aaPredicted RBP10.54□□□□□ -0.72
VMP1-209ENST00000588915 DEFB125Q8N687 156 aa10.54□□□□□ -0.72
VMP1-209ENST00000588915 OR10R2Q8NGX6 335 aa10.54□□□□□ -0.72
VMP1-209ENST00000588915 FAM110AQ9BQ89 295 aa10.54□□□□□ -0.72
VMP1-209ENST00000588915 GINS4Q9BRT9 223 aa10.54□□□□□ -0.72
VMP1-209ENST00000588915 VCXQ9H320 206 aa10.54□□□□□ -0.72
VMP1-209ENST00000588915 ZNF430Q9H8G1 570 aaPredicted RBP10.54□□□□□ -0.72
VMP1-209ENST00000588915 SRD5A3Q9H8P0 318 aa10.54□□□□□ -0.72
VMP1-209ENST00000588915 DMRT1Q9Y5R6 373 aa10.54□□□□□ -0.72
VMP1-209ENST00000588915 ALMS1Q8TCU4 4167 aa10.53□□□□□ -0.72
VMP1-209ENST00000588915 C2orf70A6NJV1 201 aa10.53□□□□□ -0.72
VMP1-209ENST00000588915 LINC00473A8K010 186 aa10.53□□□□□ -0.72
VMP1-209ENST00000588915 MFNGO00587 321 aa10.53□□□□□ -0.72
VMP1-209ENST00000588915 SLC22A5O76082 557 aa10.53□□□□□ -0.72
VMP1-209ENST00000588915 FOLR2P14207 255 aa10.53□□□□□ -0.72
VMP1-209ENST00000588915 CALRP27797 417 aaKnown RBP10.53□□□□□ -0.72
VMP1-209ENST00000588915 MLLT11Q13015 90 aaPredicted RBP10.53□□□□□ -0.72
VMP1-209ENST00000588915 ARL6IP1Q15041 203 aa10.53□□□□□ -0.72
VMP1-209ENST00000588915 RCN1Q15293 331 aa10.53□□□□□ -0.72
VMP1-209ENST00000588915 GUCA2BQ16661 112 aa10.53□□□□□ -0.72
VMP1-209ENST00000588915 C15orf32Q32M92 178 aa10.53□□□□□ -0.72
VMP1-209ENST00000588915 DUSP21Q9H596 190 aa10.53□□□□□ -0.72
VMP1-209ENST00000588915 TPRKBQ9Y3C4 175 aa10.53□□□□□ -0.72
VMP1-209ENST00000588915 METTL21EPA6NDL7 271 aa10.52□□□□□ -0.73
VMP1-209ENST00000588915 RAB27BO00194 218 aa10.52□□□□□ -0.73
VMP1-209ENST00000588915 PRH1P02810 166 aa10.52□□□□□ -0.73
VMP1-209ENST00000588915 CTXN2P0C2S0 81 aa10.52□□□□□ -0.73
VMP1-209ENST00000588915 SAA1P0DJI8 122 aaPredicted RBP10.52□□□□□ -0.73
VMP1-209ENST00000588915 HIST1H1DP16402 221 aaKnown RBP10.52□□□□□ -0.73
VMP1-209ENST00000588915 RAB6AP20340 208 aa10.52□□□□□ -0.73
VMP1-209ENST00000588915 RPS25P62851 125 aaKnown RBP10.52□□□□□ -0.73
VMP1-209ENST00000588915 KLK9Q2XQG4 91 aa10.52□□□□□ -0.73
VMP1-209ENST00000588915 IDO2Q6ZQW0 420 aa10.52□□□□□ -0.73
VMP1-209ENST00000588915 SLC16A13Q7RTY0 426 aa10.52□□□□□ -0.73
VMP1-209ENST00000588915 ZNF645Q8N7E2 425 aa10.52□□□□□ -0.73
VMP1-209ENST00000588915 VSTM2AQ8TAG5 236 aa10.52□□□□□ -0.73
VMP1-209ENST00000588915 ACOT13Q9NPJ3 140 aa10.52□□□□□ -0.73
VMP1-209ENST00000588915 KLK9Q9UKQ9 250 aa10.52□□□□□ -0.73
VMP1-209ENST00000588915 MRPS7Q9Y2R9 242 aaKnown RBP10.52□□□□□ -0.73
VMP1-209ENST00000588915 PRELID3BQ9Y3B1 194 aa10.52□□□□□ -0.73
VMP1-209ENST00000588915 TRAV1-2A0A0B4J238 106 aa10.51□□□□□ -0.73
VMP1-209ENST00000588915 NPIPB5A8MRT5 1133 aa10.51□□□□□ -0.73
VMP1-209ENST00000588915 PDCD5O14737 125 aa10.51□□□□□ -0.73
VMP1-209ENST00000588915 OR2J3O76001 311 aa10.51□□□□□ -0.73
VMP1-209ENST00000588915 HSMCR30P0CW71 290 aa10.51□□□□□ -0.73
VMP1-209ENST00000588915 GNB3P16520 340 aa10.51□□□□□ -0.73
VMP1-209ENST00000588915 CBLN1P23435 193 aa10.51□□□□□ -0.73
VMP1-209ENST00000588915 DTYMKP23919 212 aa10.51□□□□□ -0.73
VMP1-209ENST00000588915 MAS1LP35410 378 aa10.51□□□□□ -0.73
VMP1-209ENST00000588915 TALDO1P37837 337 aa10.51□□□□□ -0.73
VMP1-209ENST00000588915 ANKRD55Q3KP44 614 aa10.51□□□□□ -0.73
VMP1-209ENST00000588915 FAM106AQ4KMX7 169 aa10.51□□□□□ -0.73
VMP1-209ENST00000588915 DCUN1D5Q9BTE7 237 aa10.51□□□□□ -0.73
VMP1-209ENST00000588915 OR51E2Q9H255 320 aa10.51□□□□□ -0.73
VMP1-209ENST00000588915 A8MWP6 167 aa10.5□□□□□ -0.73
VMP1-209ENST00000588915 FCGR3BO75015 233 aa10.5□□□□□ -0.73
VMP1-209ENST00000588915 OR2C1O95371 312 aa10.5□□□□□ -0.73
VMP1-209ENST00000588915 DHFRP00374 187 aa10.5□□□□□ -0.73
VMP1-209ENST00000588915 HLA-DQB1P01920 261 aa10.5□□□□□ -0.73
VMP1-209ENST00000588915 CRYGCP07315 174 aa10.5□□□□□ -0.73
VMP1-209ENST00000588915 FABP5Q01469 135 aa10.5□□□□□ -0.73
VMP1-209ENST00000588915 ARFRP1Q13795 201 aa10.5□□□□□ -0.73
VMP1-209ENST00000588915 HES5Q5TA89 166 aa10.5□□□□□ -0.73
VMP1-209ENST00000588915 OR4A47Q6IF82 309 aa10.5□□□□□ -0.73
VMP1-209ENST00000588915 MGLLQ99685 303 aa10.5□□□□□ -0.73
VMP1-209ENST00000588915 SLC2A9Q9NRM0 540 aa10.5□□□□□ -0.73
VMP1-209ENST00000588915 FBXL7Q9UJT9 491 aa10.5□□□□□ -0.73
VMP1-209ENST00000588915 OR2W1Q9Y3N9 320 aa10.5□□□□□ -0.73
VMP1-209ENST00000588915 TRAV25A0A0B4J276 109 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 IFITM5A6NNB3 132 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 TEX22C9J3V5 150 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 PPP5D1E7EU14 171 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 RGS10O43665 173 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 HIST1H1BP16401 226 aaKnown RBP10.49□□□□□ -0.73
VMP1-209ENST00000588915 CD36P16671 472 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 PLA2G7Q13093 441 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 ZNF57Q68EA5 555 aaPredicted RBP10.49□□□□□ -0.73
VMP1-209ENST00000588915 KCTD9Q7L273 389 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 PRSS48Q7RTY5 328 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 MAFIPQ8WZ33 124 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 LINC00476Q8WZB0 136 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 WDR89Q96FK6 387 aaPredicted RBP10.49□□□□□ -0.73
VMP1-209ENST00000588915 FANCD2OSQ96PS1 177 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 FYTTD1Q96QD9 318 aaKnown RBP10.49□□□□□ -0.73
VMP1-209ENST00000588915 OR2A7Q96R45 310 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 HSD17B10Q99714 261 aaKnown RBP10.49□□□□□ -0.73
VMP1-209ENST00000588915 GGTLC1Q9BX51 225 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 WFDC10AQ9H1F0 79 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 DCSTAMPQ9H295 470 aa10.49□□□□□ -0.73
VMP1-209ENST00000588915 A0A075B6Q4 140 aa10.48□□□□□ -0.73
VMP1-209ENST00000588915 LOC102724200A0A096LPH7 203 aaPredicted RBP10.48□□□□□ -0.73
VMP1-209ENST00000588915 DPPA5A6NC42 116 aa10.48□□□□□ -0.73
VMP1-209ENST00000588915 IL6RP08887 468 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms