RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 RITA1Q96K30 269 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 HARBI1Q96MB7 349 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 COMMD9Q9P000 198 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 AKAP9Q99996 3911 aa11.67□□□□□ -0.54
NPC1-207ENST00000588867 CELSR1Q9NYQ6 3014 aa11.66□□□□□ -0.54
NPC1-207ENST00000588867 A0A0G2JRQ6 117 aa11.66□□□□□ -0.54
NPC1-207ENST00000588867 VENTXO95231 258 aa11.66□□□□□ -0.54
NPC1-207ENST00000588867 BRS3P32247 399 aa11.66□□□□□ -0.54
NPC1-207ENST00000588867 BPIFB3P59826 476 aa11.66□□□□□ -0.54
NPC1-207ENST00000588867 IAH1Q2TAA2 248 aaPredicted RBP11.66□□□□□ -0.54
NPC1-207ENST00000588867 TMEM177Q53S58 311 aa11.66□□□□□ -0.54
NPC1-207ENST00000588867 SPNS3Q6ZMD2 512 aa11.66□□□□□ -0.54
NPC1-207ENST00000588867 BCL6BQ8N143 479 aaPredicted RBP11.66□□□□□ -0.54
NPC1-207ENST00000588867 OSR1Q8TAX0 266 aaPredicted RBP11.66□□□□□ -0.54
NPC1-207ENST00000588867 WDR89Q96FK6 387 aaPredicted RBP11.66□□□□□ -0.54
NPC1-207ENST00000588867 RHOVQ96L33 236 aa11.66□□□□□ -0.54
NPC1-207ENST00000588867 RANGRFQ9HD47 186 aaPredicted RBP11.66□□□□□ -0.54
NPC1-207ENST00000588867 SRRM4A7MD48 611 aaKnown RBP11.65□□□□□ -0.54
NPC1-207ENST00000588867 SNRNP70P08621 437 aaKnown RBP11.65□□□□□ -0.54
NPC1-207ENST00000588867 FAM120AOSQ5T036 256 aa11.65□□□□□ -0.54
NPC1-207ENST00000588867 LSM10Q969L4 123 aaKnown RBP11.65□□□□□ -0.54
NPC1-207ENST00000588867 RANBP3Q9H6Z4 567 aaPredicted RBP11.65□□□□□ -0.54
NPC1-207ENST00000588867 MMP24Q9Y5R2 645 aa11.65□□□□□ -0.54
NPC1-207ENST00000588867 FSHBP01225 129 aa11.65□□□□□ -0.54
NPC1-207ENST00000588867 FBP1P09467 338 aa11.65□□□□□ -0.54
NPC1-207ENST00000588867 CD99P14209 185 aa11.65□□□□□ -0.54
NPC1-207ENST00000588867 HABP2Q14520 560 aaPredicted RBP11.65□□□□□ -0.54
NPC1-207ENST00000588867 NMSQ5H8A3 153 aa11.65□□□□□ -0.54
NPC1-207ENST00000588867 THOC7Q6I9Y2 204 aaKnown RBP11.65□□□□□ -0.54
NPC1-207ENST00000588867 C2orf50Q96LR7 162 aa11.65□□□□□ -0.54
NPC1-207ENST00000588867 FYTTD1Q96QD9 318 aaKnown RBP11.65□□□□□ -0.54
NPC1-207ENST00000588867 NEURL2Q9BR09 285 aa11.65□□□□□ -0.54
NPC1-207ENST00000588867 AIFM2Q9BRQ8 373 aa11.65□□□□□ -0.54
NPC1-207ENST00000588867 MOSP00540 346 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 FAM106CPP0CH98 169 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 CD300CQ08708 224 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 Q6ZRM9 215 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 OR2T10Q8NGZ9 312 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 ST6GAL2Q96JF0 529 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 MEGF9Q9H1U4 602 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 TMEM140Q9NV12 185 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 CACNG5Q9UF02 275 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 NSG2Q9Y328 171 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 TLN2Q9Y4G6 2542 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 OTOGQ6ZRI0 2925 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 RBMXL2O75526 392 aaKnown RBP11.64□□□□□ -0.55
NPC1-207ENST00000588867 LY6G6DO95868 133 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 CNTFRP26992 372 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 SRP14P37108 136 aaKnown RBP11.64□□□□□ -0.55
NPC1-207ENST00000588867 LGALS7P47929 136 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 OR4A47Q6IF82 309 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 FAM219AQ8IW50 185 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 TEX29Q8N6K0 151 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 EAF1Q96JC9 268 aaPredicted RBP11.64□□□□□ -0.55
NPC1-207ENST00000588867 SPIN2AQ99865 258 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 SSX3Q99909 188 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 SPIN2BQ9BPZ2 258 aa11.64□□□□□ -0.55
NPC1-207ENST00000588867 MDFIC2A0A1B0GVS7 189 aa11.63□□□□□ -0.55
NPC1-207ENST00000588867 CYSRT1A8MQ03 144 aa11.63□□□□□ -0.55
NPC1-207ENST00000588867 OR2A4O95047 310 aa11.63□□□□□ -0.55
NPC1-207ENST00000588867 NXPH3O95157 252 aa11.63□□□□□ -0.55
NPC1-207ENST00000588867 SAA1P0DJI8 122 aaPredicted RBP11.63□□□□□ -0.55
NPC1-207ENST00000588867 DEFB112Q30KQ8 113 aa11.63□□□□□ -0.55
NPC1-207ENST00000588867 ZBTB8BQ8NAP8 495 aaPredicted RBP11.63□□□□□ -0.55
NPC1-207ENST00000588867 OR1S1Q8NH92 325 aa11.63□□□□□ -0.55
NPC1-207ENST00000588867 OR2A7Q96R45 310 aa11.63□□□□□ -0.55
NPC1-207ENST00000588867 TMUB1Q9BVT8 246 aa11.63□□□□□ -0.55
NPC1-207ENST00000588867 TRAV3A0A0B4J244 114 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 A0A1B0GU03 582 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 FAM90A9PA6NNJ1 464 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 SLC25A17O43808 307 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 SCGB1D2O95969 90 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 IGLV2-23P01705 113 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 GIPP09681 153 aaPredicted RBP11.62□□□□□ -0.55
NPC1-207ENST00000588867 OR9G9P0C7N8 305 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 TMEM11P17152 192 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 CYCSP99999 105 aaKnown RBP11.62□□□□□ -0.55
NPC1-207ENST00000588867 SMCO1Q147U7 214 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 VMA21Q3ZAQ7 101 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 LRRC37A5PQ49AS3 106 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 FBLN7Q53RD9 439 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 OR4A16Q8NH70 328 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 TSNAXQ99598 290 aaKnown RBP11.62□□□□□ -0.55
NPC1-207ENST00000588867 RNF5Q99942 180 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 SMLR1H3BR10 107 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 SNAPC5O75971 98 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 P0C879 139 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 F2RL1P55085 397 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 RAP2BP61225 183 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 MMDQ15546 238 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 POU2AF1Q16633 256 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 LRRC75BQ2VPJ9 315 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 FOXRED2Q8IWF2 684 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 OR2T35Q8NGX2 323 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 NMES1Q9C002 83 aa11.62□□□□□ -0.55
NPC1-207ENST00000588867 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.62□□□□□ -0.55
NPC1-207ENST00000588867 SETXQ7Z333 2677 aaKnown RBP11.61□□□□□ -0.55
NPC1-207ENST00000588867 NCBP2LA6PVI3 153 aaKnown RBP11.61□□□□□ -0.55
NPC1-207ENST00000588867 HNF1AP20823 631 aa11.61□□□□□ -0.55
NPC1-207ENST00000588867 OR2B8PP59922 312 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms