RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 SAA1P0DJI8 122 aaPredicted RBP15.84■□□□□ 0.13
DDX39A-207ENST00000588542 PPIFP30405 207 aaKnown RBP15.84■□□□□ 0.13
DDX39A-207ENST00000588542 CATR1Q13166 79 aa15.84■□□□□ 0.13
DDX39A-207ENST00000588542 VMA21Q3ZAQ7 101 aa15.84■□□□□ 0.13
DDX39A-207ENST00000588542 FAAP20Q6NZ36 180 aa15.84■□□□□ 0.13
DDX39A-207ENST00000588542 IDO2Q6ZQW0 420 aa15.84■□□□□ 0.13
DDX39A-207ENST00000588542 SPAG16Q8N0X2 631 aa15.84■□□□□ 0.13
DDX39A-207ENST00000588542 OR6Q1Q8NGQ2 317 aa15.84■□□□□ 0.13
DDX39A-207ENST00000588542 OR51H1Q8NH63 302 aa15.84■□□□□ 0.13
DDX39A-207ENST00000588542 GON7Q9BXV9 100 aa15.84■□□□□ 0.13
DDX39A-207ENST00000588542 NUBP2Q9Y5Y2 271 aa15.84■□□□□ 0.13
DDX39A-207ENST00000588542 FBN3Q75N90 2809 aa15.84■□□□□ 0.13
DDX39A-207ENST00000588542 ANKRD20A5PA0PJZ0 165 aa15.83■□□□□ 0.12
DDX39A-207ENST00000588542 RBFOX2O43251 390 aaKnown RBP eCLIP15.83■□□□□ 0.122e-7■■□□□ 14.5
DDX39A-207ENST00000588542 IGHG4P01861 327 aa15.83■□□□□ 0.12
DDX39A-207ENST00000588542 RLN1P04808 185 aa15.83■□□□□ 0.12
DDX39A-207ENST00000588542 VDAC1P21796 283 aa15.83■□□□□ 0.12
DDX39A-207ENST00000588542 ETV6P41212 452 aa15.83■□□□□ 0.12
DDX39A-207ENST00000588542 LPCAT3Q6P1A2 487 aa15.83■□□□□ 0.12
DDX39A-207ENST00000588542 VKORC1L1Q8N0U8 176 aa15.83■□□□□ 0.12
DDX39A-207ENST00000588542 COMMD1Q8N668 190 aa15.83■□□□□ 0.12
DDX39A-207ENST00000588542 TSSC4Q9Y5U2 329 aaPredicted RBP15.83■□□□□ 0.12
DDX39A-207ENST00000588542 TRAV41A0A0B4J266 112 aa15.82■□□□□ 0.12
DDX39A-207ENST00000588542 A6NHS1 94 aa15.82■□□□□ 0.12
DDX39A-207ENST00000588542 OPN1MWP04001 364 aa15.82■□□□□ 0.12
DDX39A-207ENST00000588542 AKAIN1P0CW23 69 aa15.82■□□□□ 0.12
DDX39A-207ENST00000588542 OPN1MW2P0DN77 364 aa15.82■□□□□ 0.12
DDX39A-207ENST00000588542 OPN1MW3P0DN78 364 aa15.82■□□□□ 0.12
DDX39A-207ENST00000588542 PTBP1P26599 531 aaKnown RBP eCLIP15.82■□□□□ 0.12
DDX39A-207ENST00000588542 PHLDA2Q53GA4 152 aa15.82■□□□□ 0.12
DDX39A-207ENST00000588542 PYDC2Q56P42 97 aa15.82■□□□□ 0.12
DDX39A-207ENST00000588542 TEX38Q6PEX7 206 aa15.82■□□□□ 0.12
DDX39A-207ENST00000588542 CMTM1Q8IZ96 169 aa15.82■□□□□ 0.12
DDX39A-207ENST00000588542 SLC38A6Q8IZM9 456 aa15.82■□□□□ 0.12
DDX39A-207ENST00000588542 RNF152Q8N8N0 203 aa15.82■□□□□ 0.12
DDX39A-207ENST00000588542 MINDY2Q8NBR6 621 aa15.82■□□□□ 0.12
DDX39A-207ENST00000588542 OR4C16Q8NGL9 310 aa15.82■□□□□ 0.12
DDX39A-207ENST00000588542 MRGPRFQ96AM1 343 aa15.82■□□□□ 0.12
DDX39A-207ENST00000588542 THAP7Q9BT49 309 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-207ENST00000588542 FAM103A1Q9BTL3 118 aaKnown RBP15.82■□□□□ 0.12
DDX39A-207ENST00000588542 A0A1W2PRX2 142 aa15.81■□□□□ 0.12
DDX39A-207ENST00000588542 FOXE3Q13461 319 aa15.81■□□□□ 0.12
DDX39A-207ENST00000588542 FXYD3Q14802 87 aa15.81■□□□□ 0.12
DDX39A-207ENST00000588542 MEF2DQ14814 521 aa15.81■□□□□ 0.12
DDX39A-207ENST00000588542 PRSS8Q16651 343 aa15.81■□□□□ 0.12
DDX39A-207ENST00000588542 TREML4Q6UXN2 200 aa15.81■□□□□ 0.12
DDX39A-207ENST00000588542 LCNL1Q6ZST4 164 aa15.81■□□□□ 0.12
DDX39A-207ENST00000588542 PUSL1Q8N0Z8 303 aaKnown RBP15.81■□□□□ 0.12
DDX39A-207ENST00000588542 TERB2Q8NHR7 220 aa15.81■□□□□ 0.12
DDX39A-207ENST00000588542 ARPC1AQ92747 370 aa15.81■□□□□ 0.12
DDX39A-207ENST00000588542 TRIM63Q969Q1 353 aa15.81■□□□□ 0.12
DDX39A-207ENST00000588542 IGLV1-40P01703 118 aa15.8■□□□□ 0.12
DDX39A-207ENST00000588542 RPLP1P05386 114 aaKnown RBP15.8■□□□□ 0.12
DDX39A-207ENST00000588542 ELANEP08246 267 aa15.8■□□□□ 0.12
DDX39A-207ENST00000588542 PSMB8P28062 276 aa15.8■□□□□ 0.12
DDX39A-207ENST00000588542 GNB1P62873 340 aa15.8■□□□□ 0.12
DDX39A-207ENST00000588542 ECSCRQ19T08 205 aa15.8■□□□□ 0.12
DDX39A-207ENST00000588542 SCGB2B2Q4G0G5 96 aa15.8■□□□□ 0.12
DDX39A-207ENST00000588542 Q8N402 240 aa15.8■□□□□ 0.12
DDX39A-207ENST00000588542 CD300LFQ8TDQ1 290 aa15.8■□□□□ 0.12
DDX39A-207ENST00000588542 ABHD5Q8WTS1 349 aa15.8■□□□□ 0.12
DDX39A-207ENST00000588542 RHOVQ96L33 236 aa15.8■□□□□ 0.12
DDX39A-207ENST00000588542 ZNF430Q9H8G1 570 aaPredicted RBP15.8■□□□□ 0.12
DDX39A-207ENST00000588542 SOX15O60248 233 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 S1PR2O95136 353 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 CNIH1O95406 144 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 HPRT1P00492 218 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 HRASP01112 189 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 PGAM2P15259 253 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 F2RP25116 425 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 PPP5CP53041 499 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 RPL23AP62750 156 aaKnown RBP15.79■□□□□ 0.12
DDX39A-207ENST00000588542 ZNF585BQ52M93 769 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 AKIRIN2Q53H80 203 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 KHDC1LQ5JSQ8 128 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 SPANXN2Q5MJ10 180 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 C18orf65Q6ZTR6 163 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 TBC1D26Q86UD7 250 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 LFNGQ8NES3 379 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 GRPEL2Q8TAA5 225 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 FAM110DQ8TAY7 271 aaPredicted RBP15.79■□□□□ 0.12
DDX39A-207ENST00000588542 PLEKHA2Q9HB19 425 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 SLC2A9Q9NRM0 540 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 ZFP57Q9NU63 452 aa15.79■□□□□ 0.12
DDX39A-207ENST00000588542 DISC1C4P0D8 188 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 KBTBD11O94819 623 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 OR2A4O95047 310 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 PI3P19957 117 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 TAS2R31P59538 309 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 RND3P61587 244 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 TMEM267Q0VDI3 215 aaPredicted RBP15.78■□□□□ 0.12
DDX39A-207ENST00000588542 POU2AF1Q16633 256 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 CXorf66Q5JRM2 361 aaPredicted RBP15.78■□□□□ 0.12
DDX39A-207ENST00000588542 SSX9Q7RTT3 188 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 TCTEX1D1Q8N7M0 179 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 POC5Q8NA72 575 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 TMEM167AQ8TBQ9 72 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 MARCH1Q8TCQ1 289 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 R3HDM4Q96D70 268 aa15.78■□□□□ 0.12
DDX39A-207ENST00000588542 ZNF486Q96H40 463 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms