RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 IRF3Q14653 427 aa10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 CDK10Q15131 360 aa10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 GUCA2BQ16661 112 aa10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 RTL8BQ17RB0 113 aa10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 VMA21Q3ZAQ7 101 aa10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 H1FOOQ8IZA3 346 aaPredicted RBP10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 DHRSXQ8N5I4 330 aa10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 PACRGLQ8N7B6 248 aa10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 BPIFB6Q8NFQ5 453 aa10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 OSR1Q8TAX0 266 aaPredicted RBP10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 ACOT12Q8WYK0 555 aa10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 MAFIPQ8WZ33 124 aa10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 FANCD2OSQ96PS1 177 aa10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 ST6GALNAC5Q9BVH7 336 aa10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 GGTLC1Q9BX51 225 aa10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 PKHD1P08F94 4074 aa10.28□□□□□ -0.76
CLPTM1-208ENST00000588274 A0A0J9YWU9 116 aa10.27□□□□□ -0.77
CLPTM1-208ENST00000588274 GGCTO75223 188 aaKnown RBP10.27□□□□□ -0.77
CLPTM1-208ENST00000588274 TUSC2O75896 110 aa10.27□□□□□ -0.77
CLPTM1-208ENST00000588274 IL6RP08887 468 aaPredicted RBP10.27□□□□□ -0.77
CLPTM1-208ENST00000588274 RRASP10301 218 aa10.27□□□□□ -0.77
CLPTM1-208ENST00000588274 TNFRSF9Q07011 255 aa10.27□□□□□ -0.77
CLPTM1-208ENST00000588274 PMS2P11Q13670 270 aa10.27□□□□□ -0.77
CLPTM1-208ENST00000588274 GPHB5Q86YW7 130 aa10.27□□□□□ -0.77
CLPTM1-208ENST00000588274 C10orf67Q8IYJ2 551 aa10.27□□□□□ -0.77
CLPTM1-208ENST00000588274 C8orf59Q8N0T1 100 aaPredicted RBP10.27□□□□□ -0.77
CLPTM1-208ENST00000588274 OR10J5Q8NHC4 309 aa10.27□□□□□ -0.77
CLPTM1-208ENST00000588274 MND1Q9BWT6 205 aa10.27□□□□□ -0.77
CLPTM1-208ENST00000588274 AK6Q9Y3D8 172 aaKnown RBP10.27□□□□□ -0.77
CLPTM1-208ENST00000588274 DNAH2Q9P225 4427 aa10.27□□□□□ -0.77
CLPTM1-208ENST00000588274 TMEM272A0A1B0GTI8 110 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 NUPR2A6NF83 97 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 HMX3A6NHT5 357 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 NPIPB5A8MRT5 1133 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 BRWD1-AS2P59051 145 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 RPS25P62851 125 aaKnown RBP10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 RPL30P62888 115 aaKnown RBP10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 EIF4EBP1Q13541 118 aaPredicted RBP10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 SPHARQ15513 63 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 RAB11BQ15907 218 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 LIPKQ5VXJ0 399 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 CEMP1Q6PRD7 247 aaPredicted RBP10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 Q6ZS49 121 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 OR56B1Q8NGI3 324 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 TMEM203Q969S6 136 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 FAM3DQ96BQ1 224 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 ADTRPQ96IZ2 230 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 SPIN2AQ99865 258 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 SPIN2BQ9BPZ2 258 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 PLGRKTQ9HBL7 147 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 ZNF257Q9Y2Q1 563 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 S4R3C0 116 aa10.26□□□□□ -0.77
CLPTM1-208ENST00000588274 CXorf65A6NEN9 183 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 CGB1A6NKQ9 187 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 RAB27BO00194 218 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 MPPED1O15442 326 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 NDUFB8O95169 186 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 IGHV3-23P01764 117 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 CRYGCP07315 174 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 ZNF735P0CB33 412 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 C8orf88P0DMB2 117 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 AREGP15514 252 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 CBX3Q13185 183 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 C2orf76Q3KRA6 126 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 FAM209BQ5JX69 171 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 BTNL8Q6UX41 500 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 UNQ9165/PRO28630Q6UXU0 137 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 SLC16A13Q7RTY0 426 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 LYG2Q86SG7 212 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 MMD2Q8IY49 270 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 VKORC1L1Q8N0U8 176 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 PUSL1Q8N0Z8 303 aaKnown RBP10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 C8orf4Q9NR00 106 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 ABCA13Q86UQ4 5058 aa10.25□□□□□ -0.77
CLPTM1-208ENST00000588274 LOC102724200A0A096LPH7 203 aaPredicted RBP10.24□□□□□ -0.77
CLPTM1-208ENST00000588274 DENRO43583 198 aaKnown RBP10.24□□□□□ -0.77
CLPTM1-208ENST00000588274 DEDDO75618 318 aa10.24□□□□□ -0.77
CLPTM1-208ENST00000588274 SCAF4O95104 1147 aaKnown RBP10.24□□□□□ -0.77
CLPTM1-208ENST00000588274 GNB3P16520 340 aa10.24□□□□□ -0.77
CLPTM1-208ENST00000588274 ATF4P18848 351 aaPredicted RBP10.24□□□□□ -0.77
CLPTM1-208ENST00000588274 TPBGQ13641 420 aa10.24□□□□□ -0.77
CLPTM1-208ENST00000588274 ZNF57Q68EA5 555 aaPredicted RBP10.24□□□□□ -0.77
CLPTM1-208ENST00000588274 UXS1Q8NBZ7 420 aa10.24□□□□□ -0.77
CLPTM1-208ENST00000588274 OR52B4Q8NGK2 314 aa10.24□□□□□ -0.77
CLPTM1-208ENST00000588274 RAB3CQ96E17 227 aa10.24□□□□□ -0.77
CLPTM1-208ENST00000588274 FBXL7Q9UJT9 491 aa10.24□□□□□ -0.77
CLPTM1-208ENST00000588274 ELF5Q9UKW6 265 aaPredicted RBP10.24□□□□□ -0.77
CLPTM1-208ENST00000588274 TP53TG1Q9Y2A0 90 aa10.24□□□□□ -0.77
CLPTM1-208ENST00000588274 IGLV11-55A0A075B6I3 123 aa10.23□□□□□ -0.77
CLPTM1-208ENST00000588274 MFSD2BA6NFX1 497 aa10.23□□□□□ -0.77
CLPTM1-208ENST00000588274 KBTBD11O94819 623 aa10.23□□□□□ -0.77
CLPTM1-208ENST00000588274 HIST1H1DP16402 221 aaKnown RBP10.23□□□□□ -0.77
CLPTM1-208ENST00000588274 CTRB1P17538 263 aa10.23□□□□□ -0.77
CLPTM1-208ENST00000588274 ARL3P36405 182 aa10.23□□□□□ -0.77
CLPTM1-208ENST00000588274 FABP5Q01469 135 aa10.23□□□□□ -0.77
CLPTM1-208ENST00000588274 TM4SF20Q53R12 229 aa10.23□□□□□ -0.77
CLPTM1-208ENST00000588274 OGFRL1Q5TC84 451 aaPredicted RBP10.23□□□□□ -0.77
CLPTM1-208ENST00000588274 CTRB2Q6GPI1 263 aa10.23□□□□□ -0.77
CLPTM1-208ENST00000588274 CLEC19AQ6UXS0 136 aa10.23□□□□□ -0.77
CLPTM1-208ENST00000588274 Q6ZWC4 215 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms