RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 H2BFWTQ7Z2G1 175 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 MRPL41Q8IXM3 137 aaKnown RBP10.4□□□□□ -0.74
TRIM47-202ENST00000585333 TEX45Q8NA69 505 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 AJUBAQ96IF1 538 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 RHOVQ96L33 236 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 MED28Q9H204 178 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 BEX1Q9HBH7 125 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 TCF19Q9Y242 345 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 MMP24Q9Y5R2 645 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 VPS13CQ709C8 3753 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 NAV3Q8IVL0 2385 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 SETD2Q9BYW2 2564 aaPredicted RBP10.4□□□□□ -0.74
TRIM47-202ENST00000585333 CSPG4Q6UVK1 2322 aa10.4□□□□□ -0.74
TRIM47-202ENST00000585333 ZFHX3Q15911 3703 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 ZNF469Q96JG9 3925 aaPredicted RBP10.39□□□□□ -0.75
TRIM47-202ENST00000585333 H3BUX3 64 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 NBR2O15453 112 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 FGF16O43320 207 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 OR2F2O95006 317 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 S1PR2O95136 353 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 LY86O95711 162 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 MAS1LP35410 378 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 PLGLAQ15195 96 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 MMDQ15546 238 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 SP6Q3SY56 376 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 ZNF585BQ52M93 769 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 LDLRAD2Q5SZI1 272 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 Q6ZNX1 250 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 NPBQ8NG41 125 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 EAF1Q96JC9 268 aaPredicted RBP10.39□□□□□ -0.75
TRIM47-202ENST00000585333 SEC22CQ9BRL7 303 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 ZFP57Q9NU63 452 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 BET1LQ9NYM9 111 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 VPREB3Q9UKI3 123 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 MOB4Q9Y3A3 225 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 ALG5Q9Y673 324 aa10.39□□□□□ -0.75
TRIM47-202ENST00000585333 IGHV3-72A0A0B4J1Y9 119 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 A0A1B0GU03 582 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 CLDN34H7C241 214 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 RAMP3O60896 148 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 ACTL6BO94805 426 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 OR2A4O95047 310 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 KRASP01116 189 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 IGKV1-16P04430 117 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 IER3P46695 156 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 MMD2Q8IY49 270 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 SELENOHQ8IZQ5 122 aaKnown RBP10.38□□□□□ -0.75
TRIM47-202ENST00000585333 DYNAPQ8N1N2 210 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 SLC35G3Q8N808 338 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 UXS1Q8NBZ7 420 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 RBM14Q96PK6 669 aaKnown RBP10.38□□□□□ -0.75
TRIM47-202ENST00000585333 OR2A7Q96R45 310 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 SMR3AQ99954 134 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 RASL11BQ9BPW5 248 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 PDCD10Q9BUL8 212 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 COA4Q9NYJ1 87 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 PRNDQ9UKY0 176 aa10.38□□□□□ -0.75
TRIM47-202ENST00000585333 NCBP2LA6PVI3 153 aaKnown RBP10.37□□□□□ -0.75
TRIM47-202ENST00000585333 RRHO14718 337 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 CRLF1O75462 422 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 RBMXL2O75526 392 aaKnown RBP10.37□□□□□ -0.75
TRIM47-202ENST00000585333 NDUFA3O95167 84 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 TRAPPC2P0DI81 140 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 TRAPPC2BP0DI82 140 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 SULT1A3P0DMM9 295 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 SULT1A4P0DMN0 295 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 HLA-GP17693 338 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 TUSC1Q2TAM9 212 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 ANKRD55Q3KP44 614 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 GSG1LQ6UXU4 331 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 FOXRED2Q8IWF2 684 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 Q8N6K4 173 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 OR52B4Q8NGK2 314 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 OR4A16Q8NH70 328 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 C17orf50Q8WW18 174 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 SEC22AQ96IW7 307 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 GPHA2Q96T91 129 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 SLC25A33Q9BSK2 321 aa10.37□□□□□ -0.75
TRIM47-202ENST00000585333 DBX1A6NMT0 343 aa10.36□□□□□ -0.75
TRIM47-202ENST00000585333 FAM90A26D6RGX4 464 aa10.36□□□□□ -0.75
TRIM47-202ENST00000585333 KBTBD11O94819 623 aa10.36□□□□□ -0.75
TRIM47-202ENST00000585333 RIPPLY3P57055 190 aa10.36□□□□□ -0.75
TRIM47-202ENST00000585333 RRAS2P62070 204 aaPredicted RBP10.36□□□□□ -0.75
TRIM47-202ENST00000585333 SMCO1Q147U7 214 aa10.36□□□□□ -0.75
TRIM47-202ENST00000585333 IL17RELQ6ZVW7 336 aa10.36□□□□□ -0.75
TRIM47-202ENST00000585333 PPP1R27Q86WC6 154 aa10.36□□□□□ -0.75
TRIM47-202ENST00000585333 BCL6BQ8N143 479 aaPredicted RBP10.36□□□□□ -0.75
TRIM47-202ENST00000585333 SIGLECL1Q8N7X8 197 aa10.36□□□□□ -0.75
TRIM47-202ENST00000585333 TMEM167AQ8TBQ9 72 aa10.36□□□□□ -0.75
TRIM47-202ENST00000585333 C22orf15Q8WYQ4 148 aa10.36□□□□□ -0.75
TRIM47-202ENST00000585333 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.36□□□□□ -0.75
TRIM47-202ENST00000585333 TMEM140Q9NV12 185 aa10.36□□□□□ -0.75
TRIM47-202ENST00000585333 METTL1Q9UBP6 276 aaKnown RBP10.36□□□□□ -0.75
TRIM47-202ENST00000585333 C5orf51A6NDU8 294 aa10.35□□□□□ -0.75
TRIM47-202ENST00000585333 A6NDX4 124 aa10.35□□□□□ -0.75
TRIM47-202ENST00000585333 INAFM1C9JVW0 142 aa10.35□□□□□ -0.75
TRIM47-202ENST00000585333 KCNAB3O43448 404 aa10.35□□□□□ -0.75
TRIM47-202ENST00000585333 SLC25A17O43808 307 aa10.35□□□□□ -0.75
TRIM47-202ENST00000585333 MED6O75586 246 aa10.35□□□□□ -0.75
TRIM47-202ENST00000585333 PET100P0DJ07 73 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms