RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 SFXN5Q8TD22 340 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 RNASEH2CQ8TDP1 164 aaKnown RBP1.66□□□□□ -2.14
VAPA-208ENST00000584796 RNF133Q8WVZ7 376 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 PPP1R14BQ96C90 147 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 CMTM5Q96DZ9 223 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 SGTBQ96EQ0 304 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 FCRL1Q96LA6 429 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 UBE2E2Q96LR5 201 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 PPP1R2P1Q96PQ5 205 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 RBBP8Q99708 897 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 ARHGDIGQ99819 225 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 RASL11BQ9BPW5 248 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 TBL1XR1Q9BZK7 514 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 Q9H3A6 140 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 C16orf95Q9H693 158 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 PTGES2Q9H7Z7 377 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 SLC25A22Q9H936 323 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 IFT46Q9NQC8 304 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 SPANXB1Q9NS25 103 aaPredicted RBP1.66□□□□□ -2.14
VAPA-208ENST00000584796 AIG1Q9NVV5 245 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 CD274Q9NZQ7 290 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 TAAR3PQ9P1P4 343 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 KLK12Q9UKR0 248 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 FBXL3Q9UKT7 428 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 SLC7A11Q9UPY5 501 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 AP3M1Q9Y2T2 418 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 SNX24Q9Y343 169 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 USH1CQ9Y6N9 552 aa1.66□□□□□ -2.14
VAPA-208ENST00000584796 IGLV8-61A0A075B6I0 122 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 FAM240AA0A1B0GVK7 77 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 A0A1B0GX12 115 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 A0A1W2PRG6 482 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 TMEM72A0PK05 275 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 SYCE1LA8MT33 242 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 CEACAM18A8MTB9 384 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 CENPBD1B2RD01 187 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 FTCDNL1E5RQL4 147 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 TNFRSF11BO00300 401 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 CDIPTO14735 213 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 MRPL33O75394 65 aaKnown RBP1.65□□□□□ -2.15
VAPA-208ENST00000584796 SUPT3HO75486 399 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 DEDDO75618 318 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 UPK1BO75841 260 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 RPP14O95059 124 aaKnown RBP1.65□□□□□ -2.15
VAPA-208ENST00000584796 SNAP29O95721 258 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 RAB36O95755 333 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 ORM1P02763 201 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 RPSAP08865 295 aaKnown RBP1.65□□□□□ -2.15
VAPA-208ENST00000584796 CD3GP09693 182 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 PGA4P0DJD7 388 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 PGA3P0DJD8 388 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 OR5H8P0DN80 308 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 CD37P11049 281 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 CBR1P16152 277 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 RAB3BP20337 219 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 ME2P23368 584 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 MYL9P24844 172 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 HLA-DMAP28067 261 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 ELK4P28324 431 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 BTCP35070 178 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 PMELP40967 661 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 RND2P52198 227 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 NCBP2P52298 156 aaKnown RBP eCLIP1.65□□□□□ -2.15
VAPA-208ENST00000584796 FOXA1P55317 472 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 TMEM33P57088 247 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 OR12D2P58182 307 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 SLC35A1P78382 337 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 MRPS25P82663 173 aaKnown RBP1.65□□□□□ -2.15
VAPA-208ENST00000584796 H3F3AP84243 136 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 CD164Q04900 197 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 PRKCDQ05655 676 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 EGFEM1PQ0D2K5 195 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 FUT5Q11128 374 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 BNIP2Q12982 314 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 SKP2Q13309 424 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 MADCAM1Q13477 382 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 EBI3Q14213 229 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 KIAA0087Q14695 138 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 TRAM1Q15629 374 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 LY6EQ16553 131 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 ACTBL2Q562R1 376 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 COA6Q5JTJ3 125 aaKnown RBP1.65□□□□□ -2.15
VAPA-208ENST00000584796 OTPQ5XKR4 325 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 STEAP4Q687X5 459 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 DRAM2Q6UX65 266 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 TEX43Q6ZNM6 134 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 TMPPEQ6ZT21 453 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 MOB1BQ7L9L4 216 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 SLC30A8Q8IWU4 369 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 MKXQ8IYA7 352 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 SPICQ8N5J4 248 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 ZFP41Q8N8Y5 198 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 OR5L1Q8NGL2 311 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 OR10J6PQ8NGY7 276 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 OR2G3Q8NGZ4 309 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 C16orf78Q8WTQ4 265 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 C10orf82Q8WW14 230 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 OR5P2Q8WZ92 322 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 FAM3DQ96BQ1 224 aa1.65□□□□□ -2.15
VAPA-208ENST00000584796 SEH1LQ96EE3 360 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms