RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 IL13RA2Q14627 380 aa8.5□□□□□ -1.05
RFFL-212ENST00000584655 ZNF146Q15072 292 aa8.5□□□□□ -1.05
RFFL-212ENST00000584655 GATAD1Q8WUU5 269 aa8.5□□□□□ -1.05
RFFL-212ENST00000584655 RPUSD4Q96CM3 377 aaKnown RBP8.5□□□□□ -1.05
RFFL-212ENST00000584655 OR4C12Q96R67 309 aa8.5□□□□□ -1.05
RFFL-212ENST00000584655 ZNF665Q9H7R5 613 aa8.5□□□□□ -1.05
RFFL-212ENST00000584655 LIN7CQ9NUP9 197 aaKnown RBP8.5□□□□□ -1.05
RFFL-212ENST00000584655 RNF115Q9Y4L5 304 aa8.5□□□□□ -1.05
RFFL-212ENST00000584655 NKX6-3A6NJ46 265 aa8.5□□□□□ -1.05
RFFL-212ENST00000584655 IGLV1-44P01699 117 aa8.5□□□□□ -1.05
RFFL-212ENST00000584655 ERVK11-1P61568 191 aa8.5□□□□□ -1.05
RFFL-212ENST00000584655 C9orf152Q5JTZ5 239 aa8.5□□□□□ -1.05
RFFL-212ENST00000584655 GSX1Q9H4S2 264 aaPredicted RBP8.5□□□□□ -1.05
RFFL-212ENST00000584655 ENY2Q9NPA8 101 aa8.5□□□□□ -1.05
RFFL-212ENST00000584655 SIAH2O43255 324 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 CDS2O95674 445 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 SNCAP37840 140 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 UBE2KP61086 200 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 FABP9Q0Z7S8 132 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 FAHD2BQ6P2I3 314 aaPredicted RBP8.49□□□□□ -1.05
RFFL-212ENST00000584655 DTD1Q8TEA8 209 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 FAHD2AQ96GK7 314 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 IGHV3-23P01764 117 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 CNTFRP26992 372 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 MRPL20Q9BYC9 149 aaKnown RBP8.49□□□□□ -1.05
RFFL-212ENST00000584655 NCBP2LA6PVI3 153 aaKnown RBP8.49□□□□□ -1.05
RFFL-212ENST00000584655 ZNF727A8MUV8 499 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 PRSS44E7EML9 344 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 ADORA2A-AS1P86434 159 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 MORN2Q502X0 79 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 LRRC10Q5BKY1 277 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 ZNF709Q8N972 641 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 EAF1Q96JC9 268 aaPredicted RBP8.49□□□□□ -1.05
RFFL-212ENST00000584655 SLC35D1Q9NTN3 355 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 ZFP57Q9NU63 452 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 UQCC1Q9NVA1 299 aa8.49□□□□□ -1.05
RFFL-212ENST00000584655 TMEM210A6NLX4 147 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 H7C1Q1 480 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 PROP1O75360 226 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 ZNF737O75373 536 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 H2AFB1P0C5Y9 115 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 FGF7P21781 194 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 MPZP25189 248 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 CFPP27918 469 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 GUSBP1Q15486 140 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 PERPQ96FX8 193 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 C18orf12Q96KH6 178 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 ZNF107Q9UII5 783 aaPredicted RBP8.48□□□□□ -1.05
RFFL-212ENST00000584655 A0A1W2PPH5 198 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 K7N7A8 449 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 F2RL1P55085 397 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 NDUFA6P56556 154 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 GNB2P62879 340 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 USF2Q15853 346 aaPredicted RBP8.48□□□□□ -1.05
RFFL-212ENST00000584655 HIST2H2BDQ6DRA6 164 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 HARBI1Q96MB7 349 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 CTSZQ9UBR2 303 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 RNASEK-C17orf49H0YIS7 233 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 RAB2AP61019 212 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 DHODHQ02127 395 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 SURF2Q15527 256 aaPredicted RBP8.48□□□□□ -1.05
RFFL-212ENST00000584655 KLF17Q5JT82 389 aaPredicted RBP8.48□□□□□ -1.05
RFFL-212ENST00000584655 BOD1Q96IK1 185 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 RITA1Q96K30 269 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 TPSG1Q9NRR2 321 aa8.48□□□□□ -1.05
RFFL-212ENST00000584655 FAM212BQ9NTI7 297 aaPredicted RBP8.48□□□□□ -1.05
RFFL-212ENST00000584655 COL27A1Q8IZC6 1860 aaPredicted RBP8.47□□□□□ -1.05
RFFL-212ENST00000584655 RRHO14718 337 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 GPR137BO60478 399 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 CNIH1O95406 144 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 IGLV2-14P01704 120 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 MMP9P14780 707 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 KITLGP21583 273 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 TMEM200BQ69YZ2 307 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 ZNF355PQ9NSJ1 428 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 TMEM140Q9NV12 185 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 POMT1Q9Y6A1 747 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 IGHV3OR16-13A0A075B7E8 117 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 IGHV3-74A0A0B4J1X5 117 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 A0A1W2PPE2 198 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 A0A1W2PPR1 153 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 JTBO76095 146 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 MEOX2P50222 304 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 ZNF525Q8N782 197 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 C1orf162Q8NEQ5 155 aaPredicted RBP8.47□□□□□ -1.05
RFFL-212ENST00000584655 SNX22Q96L94 193 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 GAFA1Q96PS6 74 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 DUX5Q96PT3 197 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 PFDN5Q99471 154 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 PBDC1Q9BVG4 233 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 GZMHP20718 246 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 UCP1P25874 307 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 SAXO1Q8IYX7 474 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 ZNF645Q8N7E2 425 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 FAM216AQ8WUB2 273 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 TAF15Q92804 592 aaKnown RBP eCLIP8.47□□□□□ -1.052e-6■■□□□ 11.9
RFFL-212ENST00000584655 ASCL2Q99929 193 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 LPAR3Q9UBY5 353 aa8.47□□□□□ -1.05
RFFL-212ENST00000584655 H0Y980 276 aa8.46□□□□□ -1.05
RFFL-212ENST00000584655 SPINK4O60575 86 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms