RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 ZNF430Q9H8G1 570 aaPredicted RBP16.52■□□□□ 0.24
PPP4R1-228ENST00000584074 TAS2R8Q9NYW2 309 aa16.52■□□□□ 0.24
PPP4R1-228ENST00000584074 ZNF256Q9Y2P7 627 aaPredicted RBP16.52■□□□□ 0.24
PPP4R1-228ENST00000584074 MRPS7Q9Y2R9 242 aaKnown RBP16.52■□□□□ 0.24
PPP4R1-228ENST00000584074 LSM4Q9Y4Z0 139 aaKnown RBP16.52■□□□□ 0.24
PPP4R1-228ENST00000584074 C13orf42A0A1B0GVH6 325 aa16.51■□□□□ 0.23
PPP4R1-228ENST00000584074 SAP30O75446 220 aa16.51■□□□□ 0.23
PPP4R1-228ENST00000584074 BRWD1-AS2P59051 145 aa16.51■□□□□ 0.23
PPP4R1-228ENST00000584074 DEFA5Q01523 94 aa16.51■□□□□ 0.23
PPP4R1-228ENST00000584074 CDK10Q15131 360 aa16.51■□□□□ 0.23
PPP4R1-228ENST00000584074 ZNF429Q86V71 674 aa16.51■□□□□ 0.23
PPP4R1-228ENST00000584074 VKORC1L1Q8N0U8 176 aa16.51■□□□□ 0.23
PPP4R1-228ENST00000584074 SRSF12Q8WXF0 261 aaKnown RBP16.51■□□□□ 0.23
PPP4R1-228ENST00000584074 SNAPC3Q92966 411 aa16.51■□□□□ 0.23
PPP4R1-228ENST00000584074 HSD17B10Q99714 261 aaKnown RBP16.51■□□□□ 0.23
PPP4R1-228ENST00000584074 TINAGL1Q9GZM7 467 aaPredicted RBP16.51■□□□□ 0.23
PPP4R1-228ENST00000584074 COA4Q9NYJ1 87 aa16.51■□□□□ 0.23
PPP4R1-228ENST00000584074 MEIS3P1A6NDR6 274 aa16.5■□□□□ 0.23
PPP4R1-228ENST00000584074 XRCC3O43542 346 aa16.5■□□□□ 0.23
PPP4R1-228ENST00000584074 MFSD4AQ8N468 514 aa16.5■□□□□ 0.23
PPP4R1-228ENST00000584074 OR13F1Q8NGS4 319 aa16.5■□□□□ 0.23
PPP4R1-228ENST00000584074 SECTM1Q8WVN6 248 aa16.5■□□□□ 0.23
PPP4R1-228ENST00000584074 S100A16Q96FQ6 103 aaKnown RBP16.5■□□□□ 0.23
PPP4R1-228ENST00000584074 CCL28Q9NRJ3 127 aa16.5■□□□□ 0.23
PPP4R1-228ENST00000584074 A0A0G2JLM5 398 aa16.49■□□□□ 0.23
PPP4R1-228ENST00000584074 ANKRD34BA5PLL1 514 aa16.49■□□□□ 0.23
PPP4R1-228ENST00000584074 TRIM64CA6NLI5 447 aa16.49■□□□□ 0.23
PPP4R1-228ENST00000584074 RBMXL2O75526 392 aaKnown RBP16.49■□□□□ 0.23
PPP4R1-228ENST00000584074 BRI3O95415 125 aa16.49■□□□□ 0.23
PPP4R1-228ENST00000584074 LY86O95711 162 aa16.49■□□□□ 0.23
PPP4R1-228ENST00000584074 UBE2NLQ5JXB2 153 aa16.49■□□□□ 0.23
PPP4R1-228ENST00000584074 C10orf55Q5SWW7 151 aa16.49■□□□□ 0.23
PPP4R1-228ENST00000584074 ACSM6Q6P461 480 aa16.49■□□□□ 0.23
PPP4R1-228ENST00000584074 SAMD12Q8N8I0 201 aa16.49■□□□□ 0.23
PPP4R1-228ENST00000584074 ADAD2Q8NCV1 583 aaKnown RBP16.49■□□□□ 0.23
PPP4R1-228ENST00000584074 OR4S2Q8NH73 311 aa16.49■□□□□ 0.23
PPP4R1-228ENST00000584074 MPPED1O15442 326 aa16.48■□□□□ 0.23
PPP4R1-228ENST00000584074 TNFSF12O43508 249 aa16.48■□□□□ 0.23
PPP4R1-228ENST00000584074 PPYP01298 95 aa16.48■□□□□ 0.23
PPP4R1-228ENST00000584074 OR9G9P0C7N8 305 aa16.48■□□□□ 0.23
PPP4R1-228ENST00000584074 CBX5P45973 191 aa16.48■□□□□ 0.23
PPP4R1-228ENST00000584074 VAX1Q5SQQ9 334 aa16.48■□□□□ 0.23
PPP4R1-228ENST00000584074 ZNF66Q6ZN08 573 aa16.48■□□□□ 0.23
PPP4R1-228ENST00000584074 MMD2Q8IY49 270 aa16.48■□□□□ 0.23
PPP4R1-228ENST00000584074 RANGRFQ9HD47 186 aaPredicted RBP16.48■□□□□ 0.23
PPP4R1-228ENST00000584074 CREBL2O60519 120 aaPredicted RBP16.47■□□□□ 0.23
PPP4R1-228ENST00000584074 ACTL6BO94805 426 aa16.47■□□□□ 0.23
PPP4R1-228ENST00000584074 NCS1P62166 190 aa16.47■□□□□ 0.23
PPP4R1-228ENST00000584074 DYRK1AQ13627 763 aa16.47■□□□□ 0.23
PPP4R1-228ENST00000584074 OR5AP2Q8NGF4 316 aa16.47■□□□□ 0.23
PPP4R1-228ENST00000584074 SLC25A46Q96AG3 418 aa16.47■□□□□ 0.23
PPP4R1-228ENST00000584074 FUNDC2Q9BWH2 189 aa16.47■□□□□ 0.23
PPP4R1-228ENST00000584074 SLC5A7Q9GZV3 580 aa16.47■□□□□ 0.23
PPP4R1-228ENST00000584074 PRH1P02810 166 aa16.46■□□□□ 0.23
PPP4R1-228ENST00000584074 TAS2R20P59543 309 aa16.46■□□□□ 0.23
PPP4R1-228ENST00000584074 FXYD4P59646 89 aa16.46■□□□□ 0.23
PPP4R1-228ENST00000584074 MSMO1Q15800 293 aa16.46■□□□□ 0.23
PPP4R1-228ENST00000584074 TMEM69Q5SWH9 247 aa16.46■□□□□ 0.23
PPP4R1-228ENST00000584074 SPIN2AQ99865 258 aa16.46■□□□□ 0.23
PPP4R1-228ENST00000584074 SPIN2BQ9BPZ2 258 aa16.46■□□□□ 0.23
PPP4R1-228ENST00000584074 IFT46Q9NQC8 304 aa16.46■□□□□ 0.23
PPP4R1-228ENST00000584074 OR2A4O95047 310 aa16.45■□□□□ 0.22
PPP4R1-228ENST00000584074 TRBV12-3P01733 135 aa16.45■□□□□ 0.22
PPP4R1-228ENST00000584074 SPNP16150 400 aa16.45■□□□□ 0.22
PPP4R1-228ENST00000584074 ZP3P21754 424 aa16.45■□□□□ 0.22
PPP4R1-228ENST00000584074 ZNF343Q6P1L6 599 aa16.45■□□□□ 0.22
PPP4R1-228ENST00000584074 GIMAP1Q8WWP7 306 aa16.45■□□□□ 0.22
PPP4R1-228ENST00000584074 USMG5Q96IX5 58 aa16.45■□□□□ 0.22
PPP4R1-228ENST00000584074 OR2A7Q96R45 310 aa16.45■□□□□ 0.22
PPP4R1-228ENST00000584074 OR4C12Q96R67 309 aa16.45■□□□□ 0.22
PPP4R1-228ENST00000584074 SULT1C2O00338 296 aa16.44■□□□□ 0.22
PPP4R1-228ENST00000584074 KBTBD11O94819 623 aa16.44■□□□□ 0.22
PPP4R1-228ENST00000584074 VBP1P61758 197 aa16.44■□□□□ 0.22
PPP4R1-228ENST00000584074 ZNF45Q02386 682 aa16.44■□□□□ 0.22
PPP4R1-228ENST00000584074 SSX9Q7RTT3 188 aa16.44■□□□□ 0.22
PPP4R1-228ENST00000584074 HAPLN4Q86UW8 402 aa16.44■□□□□ 0.22
PPP4R1-228ENST00000584074 TMEM17Q86X19 198 aa16.44■□□□□ 0.22
PPP4R1-228ENST00000584074 PUSL1Q8N0Z8 303 aaKnown RBP16.44■□□□□ 0.22
PPP4R1-228ENST00000584074 VSTM2AQ8TAG5 236 aa16.44■□□□□ 0.22
PPP4R1-228ENST00000584074 TMEM167AQ8TBQ9 72 aa16.44■□□□□ 0.22
PPP4R1-228ENST00000584074 PEF1Q9UBV8 284 aaKnown RBP16.44■□□□□ 0.22
PPP4R1-228ENST00000584074 HMX3A6NHT5 357 aa16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 EIF4EP06730 217 aaKnown RBP16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 KIR2DS2P43631 304 aa16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 RFX2P48378 723 aa16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 RHOGP84095 191 aa16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 KLF5Q13887 457 aaPredicted RBP16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 SPAG16Q8N0X2 631 aa16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 TTC9CQ8N5M4 171 aa16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 ZBTB34Q8NCN2 500 aa16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 OR6Q1Q8NGQ2 317 aa16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 KCTD12Q96CX2 325 aaKnown RBP16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 ELOVL1Q9BW60 279 aa16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 AKIP1Q9NQ31 210 aa16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 EHFQ9NZC4 300 aa16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 COMMD3Q9UBI1 195 aa16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 ADAM30Q9UKF2 790 aa16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 ANAPC10Q9UM13 185 aa16.43■□□□□ 0.22
PPP4R1-228ENST00000584074 TEX22C9J3V5 150 aa16.42■□□□□ 0.22
PPP4R1-228ENST00000584074 E7EUB6 86 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms