RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	FCGR3B	O75015	233 aa		11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	TUSC2	O75896	110 aa		11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	OR2J3	O76001	311 aa		11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	ACTL6B	O94805	426 aa		11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	TPPP	O94811	219 aa		11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	CD7	P09564	240 aa		11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	SAA1	P0DJI8	122 aa	Predicted RBP	11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	PSMD7	P51665	324 aa		11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	C19orf35	Q6ZS72	473 aa		11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	FAM223A	Q8IWN6	122 aa		11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	DEFB125	Q8N687	156 aa		11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	HIPK2	Q9H2X6	1198 aa		11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	ACOT13	Q9NPJ3	140 aa		11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	ELF5	Q9UKW6	265 aa	Predicted RBP	11.46	□□□□□ -0.57
SREBF1-222	ENST00000583732	SMIM30	A4D0T7	59 aa		11.45	□□□□□ -0.58
SREBF1-222	ENST00000583732	HMX3	A6NHT5	357 aa		11.45	□□□□□ -0.58
SREBF1-222	ENST00000583732	RAB27B	O00194	218 aa		11.45	□□□□□ -0.58
SREBF1-222	ENST00000583732	PDCD5	O14737	125 aa		11.45	□□□□□ -0.58
SREBF1-222	ENST00000583732	HLA-A	P01891	365 aa	Known RBP	11.45	□□□□□ -0.58
SREBF1-222	ENST00000583732	RANBP1	P43487	201 aa		11.45	□□□□□ -0.58
SREBF1-222	ENST00000583732	CDK10	Q15131	360 aa		11.45	□□□□□ -0.58
SREBF1-222	ENST00000583732	GUCA2B	Q16661	112 aa		11.45	□□□□□ -0.58
SREBF1-222	ENST00000583732	KCTD9	Q7L273	389 aa		11.45	□□□□□ -0.58
SREBF1-222	ENST00000583732	OR2K2	Q8NGT1	345 aa		11.45	□□□□□ -0.58
SREBF1-222	ENST00000583732	OSR1	Q8TAX0	266 aa	Predicted RBP	11.45	□□□□□ -0.58
SREBF1-222	ENST00000583732	SLC2A8	Q9NY64	477 aa		11.45	□□□□□ -0.58
SREBF1-222	ENST00000583732	PLEC	Q15149	4684 aa	Known RBP	11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	AIRE	O43918	545 aa		11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	JTB	O76095	146 aa		11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	DIRAS3	O95661	229 aa		11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	IGHV3-23	P01764	117 aa		11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	MYL9	P24844	172 aa		11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	MECP2	P51608	486 aa	Known RBP	11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	SSX1	Q16384	188 aa		11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	PRSS48	Q7RTY5	328 aa		11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	MMD2	Q8IY49	270 aa		11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	VKORC1L1	Q8N0U8	176 aa		11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	NRG4	Q8WWG1	115 aa		11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	SPIN2A	Q99865	258 aa		11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	SPIN2B	Q9BPZ2	258 aa		11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	ATG5	Q9H1Y0	275 aa		11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	SRD5A3	Q9H8P0	318 aa		11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732		S4R3C0	116 aa		11.44	□□□□□ -0.58
SREBF1-222	ENST00000583732	TRBV9	A0A0B4J1U6	114 aa		11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	RBMY1B	A6NDE4	496 aa	Known RBP	11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	RBMY1E	A6NEQ0	496 aa	Known RBP	11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	IFITM5	A6NNB3	132 aa		11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	ZNF785	A8K8V0	405 aa		11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	CREBL2	O60519	120 aa	Predicted RBP	11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	RBMY1D	P0C7P1	496 aa	Known RBP	11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	RAB3B	P20337	219 aa		11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	RAB6A	P20340	208 aa		11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	NFYA	P23511	347 aa	Predicted RBP	11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	CRHBP	P24387	322 aa		11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	RPL30	P62888	115 aa	Known RBP	11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	C15orf32	Q32M92	178 aa		11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	ZNF645	Q8N7E2	425 aa		11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	CACNG8	Q8WXS5	425 aa		11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	WDR89	Q96FK6	387 aa	Predicted RBP	11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	FYTTD1	Q96QD9	318 aa	Known RBP	11.43	□□□□□ -0.58
SREBF1-222	ENST00000583732	DPPA5	A6NC42	116 aa		11.42	□□□□□ -0.58
SREBF1-222	ENST00000583732	METTL21EP	A6NDL7	271 aa		11.42	□□□□□ -0.58
SREBF1-222	ENST00000583732	C2orf70	A6NJV1	201 aa		11.42	□□□□□ -0.58
SREBF1-222	ENST00000583732	OR11H12	B2RN74	326 aa		11.42	□□□□□ -0.58
SREBF1-222	ENST00000583732	OR2C1	O95371	312 aa		11.42	□□□□□ -0.58
SREBF1-222	ENST00000583732	FOLR2	P14207	255 aa		11.42	□□□□□ -0.58
SREBF1-222	ENST00000583732	DEFB114	Q30KQ6	69 aa		11.42	□□□□□ -0.58
SREBF1-222	ENST00000583732	ZNF367	Q7RTV3	350 aa		11.42	□□□□□ -0.58
SREBF1-222	ENST00000583732	TTC9C	Q8N5M4	171 aa		11.42	□□□□□ -0.58
SREBF1-222	ENST00000583732	NECAP1	Q8NC96	275 aa		11.42	□□□□□ -0.58
SREBF1-222	ENST00000583732	ST6GALNAC5	Q9BVH7	336 aa		11.42	□□□□□ -0.58
SREBF1-222	ENST00000583732	MRPS7	Q9Y2R9	242 aa	Known RBP	11.42	□□□□□ -0.58
SREBF1-222	ENST00000583732	PRELID3B	Q9Y3B1	194 aa		11.42	□□□□□ -0.58
SREBF1-222	ENST00000583732	TRAV1-2	A0A0B4J238	106 aa		11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	IGKV1D-13	A0A0B4J2D9	117 aa		11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	TEX22	C9J3V5	150 aa		11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	IGKV1-13	P0DP09	117 aa		11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	CD36	P16671	472 aa		11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	DTYMK	P23919	212 aa		11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	RPL27A	P46776	148 aa	Known RBP	11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	TBCE	Q15813	527 aa	Predicted RBP	11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	CDNF	Q49AH0	187 aa		11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	C22orf42	Q6IC83	251 aa		11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732		Q6ZS49	121 aa		11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	SLC25A42	Q86VD7	318 aa		11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	LAX1	Q8IWV1	398 aa		11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	NUDCD2	Q8WVJ2	157 aa		11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	TCTEX1D2	Q8WW35	142 aa		11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	KCTD12	Q96CX2	325 aa	Known RBP	11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	FBXL7	Q9UJT9	491 aa		11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	SPATA2	Q9UM82	520 aa		11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	RBMX2	Q9Y388	322 aa	Known RBP	11.41	□□□□□ -0.58
SREBF1-222	ENST00000583732	GGCT	O75223	188 aa	Known RBP	11.4	□□□□□ -0.58
SREBF1-222	ENST00000583732	NDUFB8	O95169	186 aa		11.4	□□□□□ -0.58
SREBF1-222	ENST00000583732	ARL3	P36405	182 aa		11.4	□□□□□ -0.58
SREBF1-222	ENST00000583732	SSX9	Q7RTT3	188 aa		11.4	□□□□□ -0.58
SREBF1-222	ENST00000583732	NR2C2AP	Q86WQ0	139 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms