RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 UBE2KP61086 200 aa19.46■□□□□ 0.71
TSEN54-209ENST00000583454 RNASE10Q5GAN6 216 aaKnown RBP19.46■□□□□ 0.71
TSEN54-209ENST00000583454 TEX45Q8NA69 505 aa19.46■□□□□ 0.71
TSEN54-209ENST00000583454 TINAGL1Q9GZM7 467 aaPredicted RBP19.46■□□□□ 0.71
TSEN54-209ENST00000583454 PARP11Q9NR21 331 aa19.46■□□□□ 0.71
TSEN54-209ENST00000583454 TSSC4Q9Y5U2 329 aaPredicted RBP19.46■□□□□ 0.71
TSEN54-209ENST00000583454 EGR2P11161 476 aaPredicted RBP19.45■□□□□ 0.7
TSEN54-209ENST00000583454 VDAC1P21796 283 aa19.45■□□□□ 0.7
TSEN54-209ENST00000583454 KIR2DS2P43631 304 aa19.45■□□□□ 0.7
TSEN54-209ENST00000583454 TAS2R19P59542 299 aa19.45■□□□□ 0.7
TSEN54-209ENST00000583454 OR2B11Q5JQS5 317 aa19.45■□□□□ 0.7
TSEN54-209ENST00000583454 AADACL3Q5VUY0 350 aa19.45■□□□□ 0.7
TSEN54-209ENST00000583454 TEX38Q6PEX7 206 aa19.45■□□□□ 0.7
TSEN54-209ENST00000583454 OR4S2Q8NH73 311 aa19.45■□□□□ 0.7
TSEN54-209ENST00000583454 CLCC1Q96S66 551 aa19.45■□□□□ 0.7
TSEN54-209ENST00000583454 FBXO7Q9Y3I1 522 aa19.45■□□□□ 0.7
TSEN54-209ENST00000583454 CA2P00918 260 aa19.44■□□□□ 0.7
TSEN54-209ENST00000583454 IGHG4P01861 327 aa19.44■□□□□ 0.7
TSEN54-209ENST00000583454 PPIFP30405 207 aaKnown RBP19.44■□□□□ 0.7
TSEN54-209ENST00000583454 UCP3P55916 312 aa19.44■□□□□ 0.7
TSEN54-209ENST00000583454 SSBP2P81877 361 aaPredicted RBP19.44■□□□□ 0.7
TSEN54-209ENST00000583454 PJVKQ0ZLH3 352 aa19.44■□□□□ 0.7
TSEN54-209ENST00000583454 MRGPRG-AS1Q2M3A8 158 aa19.44■□□□□ 0.7
TSEN54-209ENST00000583454 C19orf54Q5BKX5 351 aa19.44■□□□□ 0.7
TSEN54-209ENST00000583454 ARRDC1Q8N5I2 433 aa19.44■□□□□ 0.7
TSEN54-209ENST00000583454 RNF152Q8N8N0 203 aa19.44■□□□□ 0.7
TSEN54-209ENST00000583454 NUBP2Q9Y5Y2 271 aa19.44■□□□□ 0.7
TSEN54-209ENST00000583454 WSB1Q9Y6I7 421 aa19.44■□□□□ 0.7
TSEN54-209ENST00000583454 TRAV41A0A0B4J266 112 aa19.43■□□□□ 0.7
TSEN54-209ENST00000583454 G3V318 75 aa19.43■□□□□ 0.7
TSEN54-209ENST00000583454 RBFOX2O43251 390 aaKnown RBP eCLIP19.43■□□□□ 0.7
TSEN54-209ENST00000583454 IFNA6P05013 189 aa19.43■□□□□ 0.7
TSEN54-209ENST00000583454 CD33P20138 364 aa19.43■□□□□ 0.7
TSEN54-209ENST00000583454 S100A5P33763 92 aa19.43■□□□□ 0.7
TSEN54-209ENST00000583454 CATR1Q13166 79 aa19.43■□□□□ 0.7
TSEN54-209ENST00000583454 FOXE3Q13461 319 aa19.43■□□□□ 0.7
TSEN54-209ENST00000583454 VMA21Q3ZAQ7 101 aa19.43■□□□□ 0.7
TSEN54-209ENST00000583454 LPCAT3Q6P1A2 487 aa19.43■□□□□ 0.7
TSEN54-209ENST00000583454 LHFPL1Q86WI0 220 aa19.43■□□□□ 0.7
TSEN54-209ENST00000583454 MINDY2Q8NBR6 621 aa19.43■□□□□ 0.7
TSEN54-209ENST00000583454 RSRP1Q9BUV0 290 aa19.43■□□□□ 0.7
TSEN54-209ENST00000583454 GPR31O00270 319 aa19.42■□□□□ 0.7
TSEN54-209ENST00000583454 ARPC1BO15143 372 aaKnown RBP19.42■□□□□ 0.7
TSEN54-209ENST00000583454 PGLYRP1O75594 196 aaPredicted RBP19.42■□□□□ 0.7
TSEN54-209ENST00000583454 ELANEP08246 267 aa19.42■□□□□ 0.7
TSEN54-209ENST00000583454 STEAP1BQ6NZ63 245 aa19.42■□□□□ 0.7
TSEN54-209ENST00000583454 CCDC190Q86UF4 302 aa19.42■□□□□ 0.7
TSEN54-209ENST00000583454 CMTM1Q8IZ96 169 aa19.42■□□□□ 0.7
TSEN54-209ENST00000583454 SPAG16Q8N0X2 631 aa19.42■□□□□ 0.7
TSEN54-209ENST00000583454 OR4D10Q8NGI6 311 aa19.42■□□□□ 0.7
TSEN54-209ENST00000583454 ZFP57Q9NU63 452 aa19.42■□□□□ 0.7
TSEN54-209ENST00000583454 V9GYH0 126 aa19.42■□□□□ 0.7
TSEN54-209ENST00000583454 RAMP3O60896 148 aa19.41■□□□□ 0.7
TSEN54-209ENST00000583454 RAB3DO95716 219 aa19.41■□□□□ 0.7
TSEN54-209ENST00000583454 PF4V1P10720 104 aa19.41■□□□□ 0.7
TSEN54-209ENST00000583454 FXYD3Q14802 87 aa19.41■□□□□ 0.7
TSEN54-209ENST00000583454 PRSS8Q16651 343 aa19.41■□□□□ 0.7
TSEN54-209ENST00000583454 IGLV1-40P01703 118 aa19.4■□□□□ 0.7
TSEN54-209ENST00000583454 ZNF735P0CB33 412 aa19.4■□□□□ 0.7
TSEN54-209ENST00000583454 SAA1P0DJI8 122 aaPredicted RBP19.4■□□□□ 0.7
TSEN54-209ENST00000583454 PTBP1P26599 531 aaKnown RBP eCLIP19.4■□□□□ 0.7
TSEN54-209ENST00000583454 PSMB8P28062 276 aa19.4■□□□□ 0.7
TSEN54-209ENST00000583454 TMEM267Q0VDI3 215 aaPredicted RBP19.4■□□□□ 0.7
TSEN54-209ENST00000583454 AKIRIN2Q53H80 203 aa19.4■□□□□ 0.7
TSEN54-209ENST00000583454 SLC38A6Q8IZM9 456 aa19.4■□□□□ 0.7
TSEN54-209ENST00000583454 OR51H1Q8NH63 302 aa19.4■□□□□ 0.7
TSEN54-209ENST00000583454 CD300LFQ8TDQ1 290 aa19.4■□□□□ 0.7
TSEN54-209ENST00000583454 ARPC1AQ92747 370 aa19.4■□□□□ 0.7
TSEN54-209ENST00000583454 TENM3Q9P273 2699 aa19.4■□□□□ 0.7
TSEN54-209ENST00000583454 K7EIL1 84 aa19.39■□□□□ 0.69
TSEN54-209ENST00000583454 ETV6P41212 452 aa19.39■□□□□ 0.69
TSEN54-209ENST00000583454 RPL23AP62750 156 aaKnown RBP19.39■□□□□ 0.69
TSEN54-209ENST00000583454 MEF2DQ14814 521 aa19.39■□□□□ 0.69
TSEN54-209ENST00000583454 CXorf66Q5JRM2 361 aaPredicted RBP19.39■□□□□ 0.69
TSEN54-209ENST00000583454 IDO2Q6ZQW0 420 aa19.39■□□□□ 0.69
TSEN54-209ENST00000583454 TCTEX1D1Q8N7M0 179 aa19.39■□□□□ 0.69
TSEN54-209ENST00000583454 TERB2Q8NHR7 220 aa19.39■□□□□ 0.69
TSEN54-209ENST00000583454 RHOVQ96L33 236 aa19.39■□□□□ 0.69
TSEN54-209ENST00000583454 FAM103A1Q9BTL3 118 aaKnown RBP19.39■□□□□ 0.69
TSEN54-209ENST00000583454 ANKRD20A5PA0PJZ0 165 aa19.38■□□□□ 0.69
TSEN54-209ENST00000583454 CNIH1O95406 144 aa19.38■□□□□ 0.69
TSEN54-209ENST00000583454 HRASP01112 189 aa19.38■□□□□ 0.69
TSEN54-209ENST00000583454 RLN1P04808 185 aa19.38■□□□□ 0.69
TSEN54-209ENST00000583454 RPLP1P05386 114 aaKnown RBP19.38■□□□□ 0.69
TSEN54-209ENST00000583454 KHDC1LQ5JSQ8 128 aa19.38■□□□□ 0.69
TSEN54-209ENST00000583454 VKORC1L1Q8N0U8 176 aa19.38■□□□□ 0.69
TSEN54-209ENST00000583454 PUSL1Q8N0Z8 303 aaKnown RBP19.38■□□□□ 0.69
TSEN54-209ENST00000583454 POC5Q8NA72 575 aa19.38■□□□□ 0.69
TSEN54-209ENST00000583454 OR6Q1Q8NGQ2 317 aa19.38■□□□□ 0.69
TSEN54-209ENST00000583454 ABHD5Q8WTS1 349 aa19.38■□□□□ 0.69
TSEN54-209ENST00000583454 ZNF430Q9H8G1 570 aaPredicted RBP19.38■□□□□ 0.69
TSEN54-209ENST00000583454 OR2A4O95047 310 aa19.37■□□□□ 0.69
TSEN54-209ENST00000583454 HPRT1P00492 218 aa19.37■□□□□ 0.69
TSEN54-209ENST00000583454 PF4P02776 101 aa19.37■□□□□ 0.69
TSEN54-209ENST00000583454 AKAIN1P0CW23 69 aa19.37■□□□□ 0.69
TSEN54-209ENST00000583454 F2RP25116 425 aa19.37■□□□□ 0.69
TSEN54-209ENST00000583454 KRTAP10-11P60412 298 aa19.37■□□□□ 0.69
TSEN54-209ENST00000583454 GNB1P62873 340 aa19.37■□□□□ 0.69
TSEN54-209ENST00000583454 ZNF79Q15937 498 aa19.37■□□□□ 0.69
TSEN54-209ENST00000583454 POU2AF1Q16633 256 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms