RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 DIRAS2Q96HU8 199 aa10.4□□□□□ -0.74
SS18-222ENST00000582792 SOSTQ9BQB4 213 aa10.4□□□□□ -0.74
SS18-222ENST00000582792 SPATA25Q9BR10 227 aa10.4□□□□□ -0.74
SS18-222ENST00000582792 FBXL15Q9H469 300 aa10.4□□□□□ -0.74
SS18-222ENST00000582792 SLC23A1Q9UHI7 598 aa10.4□□□□□ -0.74
SS18-222ENST00000582792 ANXA10Q9UJ72 324 aa10.4□□□□□ -0.74
SS18-222ENST00000582792 MRPS7Q9Y2R9 242 aaKnown RBP10.4□□□□□ -0.74
SS18-222ENST00000582792 IGKV1D-8A0A087WSZ0 117 aa10.39□□□□□ -0.75
SS18-222ENST00000582792 RRHO14718 337 aa10.39□□□□□ -0.75
SS18-222ENST00000582792 PTBP1P26599 531 aaKnown RBP eCLIP10.39□□□□□ -0.75
SS18-222ENST00000582792 CEACAM6P40199 344 aa10.39□□□□□ -0.75
SS18-222ENST00000582792 SSBP1Q04837 148 aaKnown RBP10.39□□□□□ -0.75
SS18-222ENST00000582792 FAM131AQ6UXB0 335 aa10.39□□□□□ -0.75
SS18-222ENST00000582792 OR10J5Q8NHC4 309 aa10.39□□□□□ -0.75
SS18-222ENST00000582792 MAFIPQ8WZ33 124 aa10.39□□□□□ -0.75
SS18-222ENST00000582792 RHOVQ96L33 236 aa10.39□□□□□ -0.75
SS18-222ENST00000582792 RSRP1Q9BUV0 290 aa10.39□□□□□ -0.75
SS18-222ENST00000582792 IFT46Q9NQC8 304 aa10.39□□□□□ -0.75
SS18-222ENST00000582792 PIPOXQ9P0Z9 390 aa10.39□□□□□ -0.75
SS18-222ENST00000582792 RNF150Q9ULK6 438 aa10.39□□□□□ -0.75
SS18-222ENST00000582792 GAB2Q9UQC2 676 aa10.39□□□□□ -0.75
SS18-222ENST00000582792 FCN1O00602 326 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 JTBO76095 146 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 PTHLHP12272 177 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 TNFSF8P32971 234 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 S100A5P33763 92 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 RCVRNP35243 200 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 TPPP2P59282 170 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 PLGLAQ15195 96 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 HAGHQ16775 308 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 AKIRIN2Q53H80 203 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 ACTBL2Q562R1 376 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 IGSF11Q5DX21 431 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 PPP1R27Q86WC6 154 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 SNX29P2Q8IUI4 249 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 H1FOOQ8IZA3 346 aaPredicted RBP10.38□□□□□ -0.75
SS18-222ENST00000582792 GVQW1Q8N7I0 195 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.38□□□□□ -0.75
SS18-222ENST00000582792 OR5AP2Q8NGF4 316 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 ABHD5Q8WTS1 349 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 MS4A10Q96PG2 267 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 AGMATQ9BSE5 352 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 C11orf54Q9H0W9 315 aaPredicted RBP10.38□□□□□ -0.75
SS18-222ENST00000582792 IFI27L2Q9H2X8 130 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 SLA2Q9H6Q3 261 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 RDH8Q9NYR8 311 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 OR1A1Q9P1Q5 309 aa10.38□□□□□ -0.75
SS18-222ENST00000582792 GABARAPH6UMI1 98 aa10.37□□□□□ -0.75
SS18-222ENST00000582792 RAB29O14966 203 aa10.37□□□□□ -0.75
SS18-222ENST00000582792 BET1O15155 118 aa10.37□□□□□ -0.75
SS18-222ENST00000582792 CD40LGP29965 261 aa10.37□□□□□ -0.75
SS18-222ENST00000582792 TAS2R46P59540 309 aa10.37□□□□□ -0.75
SS18-222ENST00000582792 ARPC4P59998 168 aa10.37□□□□□ -0.75
SS18-222ENST00000582792 CDK10Q15131 360 aa10.37□□□□□ -0.75
SS18-222ENST00000582792 UNQ5815/PRO19632Q6UWF5 114 aa10.37□□□□□ -0.75
SS18-222ENST00000582792 LINC00299Q6ZSB3 139 aa10.37□□□□□ -0.75
SS18-222ENST00000582792 LFNGQ8NES3 379 aa10.37□□□□□ -0.75
SS18-222ENST00000582792 SNAPC3Q92966 411 aa10.37□□□□□ -0.75
SS18-222ENST00000582792 ABHD1Q96SE0 405 aa10.37□□□□□ -0.75
SS18-222ENST00000582792 GINS4Q9BRT9 223 aa10.37□□□□□ -0.75
SS18-222ENST00000582792 FAM103A1Q9BTL3 118 aaKnown RBP10.37□□□□□ -0.75
SS18-222ENST00000582792 MTFP1Q9UDX5 166 aa10.37□□□□□ -0.75
SS18-222ENST00000582792 FABP12A6NFH5 140 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 OR5H14A6NHG9 310 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 GSTZ1O43708 216 aaPredicted RBP10.36□□□□□ -0.75
SS18-222ENST00000582792 TUSC2O75896 110 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 SLC22A5O76082 557 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 IFNA6P05013 189 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 CT45A6P0DMU7 189 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 CT45A5P0DMU8 189 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 CT45A7P0DMV0 189 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 ZP3P21754 424 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 MC5RP33032 325 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 ETV6P41212 452 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 ZNF562Q6V9R5 426 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 CCDC190Q86UF4 302 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 OR52I2Q8NH67 350 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 SMIM4Q8WVI0 70 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 GIMAP1Q8WWP7 306 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 FCAMRQ8WWV6 532 aa10.36□□□□□ -0.75
SS18-222ENST00000582792 RANGRFQ9HD47 186 aaPredicted RBP10.36□□□□□ -0.75
SS18-222ENST00000582792 H0Y980 276 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 H0YJW9 148 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 ST8SIA5O15466 376 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 RBBP9O75884 186 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 TRGV3P03979 118 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 TBPP20226 339 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 IL18Q14116 193 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 MSMO1Q15800 293 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 RPL39P5Q59GN2 51 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 DHRS11Q6UWP2 260 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 CLCC1Q96S66 551 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 RNF5Q99942 180 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 PARP12Q9H0J9 701 aaKnown RBP10.35□□□□□ -0.75
SS18-222ENST00000582792 ZNF221Q9UK13 617 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 RBMX2Q9Y388 322 aaKnown RBP10.35□□□□□ -0.75
SS18-222ENST00000582792 WASHC3Q9Y3C0 194 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 OR2W1Q9Y3N9 320 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 TNCP24821 2201 aa10.35□□□□□ -0.75
SS18-222ENST00000582792 MEIS3P1A6NDR6 274 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms