RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 PRB3Q04118 309 aaPredicted RBP10.21□□□□□ -0.78
SRSF1-204ENST00000581979 OPCMLQ14982 345 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 FAM71F2Q6NXP2 309 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 ACOT7LQ6ZUV0 252 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 TMUB2Q71RG4 321 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 ZNF383Q8NA42 475 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 OR4S2Q8NH73 311 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 R3HDM4Q96D70 268 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 ARL6Q9H0F7 186 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 CACNG5Q9UF02 275 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 RCL1Q9Y2P8 373 aaKnown RBP10.21□□□□□ -0.78
SRSF1-204ENST00000581979 POMT1Q9Y6A1 747 aa10.21□□□□□ -0.78
SRSF1-204ENST00000581979 A0A0D9SG52 128 aa10.2□□□□□ -0.78
SRSF1-204ENST00000581979 NXPH3O95157 252 aa10.2□□□□□ -0.78
SRSF1-204ENST00000581979 CT45A6P0DMU7 189 aa10.2□□□□□ -0.78
SRSF1-204ENST00000581979 CT45A5P0DMU8 189 aa10.2□□□□□ -0.78
SRSF1-204ENST00000581979 CT45A7P0DMV0 189 aa10.2□□□□□ -0.78
SRSF1-204ENST00000581979 IZUMO4Q1ZYL8 232 aa10.2□□□□□ -0.78
SRSF1-204ENST00000581979 H2BFWTQ7Z2G1 175 aa10.2□□□□□ -0.78
SRSF1-204ENST00000581979 Q8N7P7 452 aa10.2□□□□□ -0.78
SRSF1-204ENST00000581979 OR13D1Q8NGV5 346 aa10.2□□□□□ -0.78
SRSF1-204ENST00000581979 GON7Q9BXV9 100 aa10.2□□□□□ -0.78
SRSF1-204ENST00000581979 SLA2Q9H6Q3 261 aa10.2□□□□□ -0.78
SRSF1-204ENST00000581979 PLEKHA2Q9HB19 425 aa10.2□□□□□ -0.78
SRSF1-204ENST00000581979 SIRT7Q9NRC8 400 aa10.2□□□□□ -0.78
SRSF1-204ENST00000581979 SLC35D1Q9NTN3 355 aa10.2□□□□□ -0.78
SRSF1-204ENST00000581979 HIF1ANQ9NWT6 349 aa10.2□□□□□ -0.78
SRSF1-204ENST00000581979 A8MXK9 166 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 E5RGE8 158 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 WRBO00258 174 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 KCNAB3O43448 404 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 FOXH1O75593 365 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 OR2F2O95006 317 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 SRP14P37108 136 aaKnown RBP10.19□□□□□ -0.78
SRSF1-204ENST00000581979 REG1BP48304 166 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 ERVK-16P61578 105 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 IFITM2Q01629 132 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 OR2F1Q13607 317 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 ZNF345Q14585 488 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 RTL8BQ17RB0 113 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 HLA-DRB5Q30154 266 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 CXorf66Q5JRM2 361 aaPredicted RBP10.19□□□□□ -0.78
SRSF1-204ENST00000581979 Q6ZRM9 215 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 PNKDQ8N490 385 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 KIR3DL3Q8N743 410 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 DMBX1Q8NFW5 382 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 MRPL20Q9BYC9 149 aaKnown RBP10.19□□□□□ -0.78
SRSF1-204ENST00000581979 NSG2Q9Y328 171 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 TRAV20A0A0B4J274 112 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 IGHV2-70DA0A0C4DH43 119 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 RNF222A6NCQ9 220 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 MARCH11A6NNE9 402 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 PITX3O75364 302 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 CRYZL1O95825 349 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 APOA2P02652 100 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 PVALBP20472 110 aaPredicted RBP10.19□□□□□ -0.78
SRSF1-204ENST00000581979 POLR2GP62487 172 aaKnown RBP eCLIP10.19□□□□□ -0.78
SRSF1-204ENST00000581979 SRSF2Q01130 221 aaKnown RBP10.19□□□□□ -0.78
SRSF1-204ENST00000581979 TGIF2LXQ8IUE1 241 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 KCNRGQ8N5I3 272 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 BEND2Q8NDZ0 799 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 C19orf24Q9BVV8 132 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 MAGT1Q9H0U3 335 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 LPAR2Q9HBW0 351 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 ZC4H2Q9NQZ6 224 aa10.19□□□□□ -0.78
SRSF1-204ENST00000581979 AMMECR1Q9Y4X0 333 aaPredicted RBP10.19□□□□□ -0.78
SRSF1-204ENST00000581979 KANTRA0A1W2PQU2 76 aa10.18□□□□□ -0.78
SRSF1-204ENST00000581979 SSSCA1O60232 199 aa10.18□□□□□ -0.78
SRSF1-204ENST00000581979 IGLV1-47P01700 117 aa10.18□□□□□ -0.78
SRSF1-204ENST00000581979 RRASP10301 218 aa10.18□□□□□ -0.78
SRSF1-204ENST00000581979 NQO2P16083 231 aa10.18□□□□□ -0.78
SRSF1-204ENST00000581979 ZNF137PP52743 207 aa10.18□□□□□ -0.78
SRSF1-204ENST00000581979 VAMP2P63027 116 aa10.18□□□□□ -0.78
SRSF1-204ENST00000581979 ID3Q02535 119 aa10.18□□□□□ -0.78
SRSF1-204ENST00000581979 DIAPH2-AS1Q14236 149 aa10.18□□□□□ -0.78
SRSF1-204ENST00000581979 SSX9Q7RTT3 188 aa10.18□□□□□ -0.78
SRSF1-204ENST00000581979 VMO1Q7Z5L0 202 aa10.18□□□□□ -0.78
SRSF1-204ENST00000581979 ST6GALNAC6Q969X2 333 aa10.18□□□□□ -0.78
SRSF1-204ENST00000581979 HEXA-AS1Q9H8Q6 139 aa10.18□□□□□ -0.78
SRSF1-204ENST00000581979 COA4Q9NYJ1 87 aa10.18□□□□□ -0.78
SRSF1-204ENST00000581979 KPTNQ9Y664 436 aa10.18□□□□□ -0.78
SRSF1-204ENST00000581979 BUB1B-PAK6H3BSN5 160 aa10.17□□□□□ -0.78
SRSF1-204ENST00000581979 H7C2Y5 167 aa10.17□□□□□ -0.78
SRSF1-204ENST00000581979 TCF21O43680 179 aa10.17□□□□□ -0.78
SRSF1-204ENST00000581979 RBMXL2O75526 392 aaKnown RBP10.17□□□□□ -0.78
SRSF1-204ENST00000581979 ARG1P05089 322 aa10.17□□□□□ -0.78
SRSF1-204ENST00000581979 P0C879 139 aa10.17□□□□□ -0.78
SRSF1-204ENST00000581979 PRTN3P24158 256 aa10.17□□□□□ -0.78
SRSF1-204ENST00000581979 TAGLNQ01995 201 aaKnown RBP10.17□□□□□ -0.78
SRSF1-204ENST00000581979 DHRS7BQ6IAN0 325 aaPredicted RBP10.17□□□□□ -0.78
SRSF1-204ENST00000581979 C1orf122Q6ZSJ8 110 aa10.17□□□□□ -0.78
SRSF1-204ENST00000581979 NABP2Q9BQ15 211 aa10.17□□□□□ -0.78
SRSF1-204ENST00000581979 MMP26Q9NRE1 261 aa10.17□□□□□ -0.78
SRSF1-204ENST00000581979 MSGN1A6NI15 193 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 H0YJW9 148 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 HRASP01112 189 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 HKR1P10072 659 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 RPL12P30050 165 aaKnown RBP10.16□□□□□ -0.78
SRSF1-204ENST00000581979 P2RY1P47900 373 aa10.16□□□□□ -0.78
SRSF1-204ENST00000581979 PAX2Q02962 417 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms