RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 CX3CL1P78423 397 aa16.25■□□□□ 0.19
CCDC42-203ENST00000581598 NDPQ00604 133 aa16.25■□□□□ 0.19
CCDC42-203ENST00000581598 ZNF616Q08AN1 781 aa16.25■□□□□ 0.19
CCDC42-203ENST00000581598 ACTBL2Q562R1 376 aa16.25■□□□□ 0.19
CCDC42-203ENST00000581598 C11orf87Q6NUJ2 197 aa16.25■□□□□ 0.19
CCDC42-203ENST00000581598 TOMM5Q8N4H5 51 aa16.25■□□□□ 0.19
CCDC42-203ENST00000581598 OR5AP2Q8NGF4 316 aa16.25■□□□□ 0.19
CCDC42-203ENST00000581598 TOLLIPQ9H0E2 274 aa16.25■□□□□ 0.19
CCDC42-203ENST00000581598 PALMDQ9NP74 551 aa16.25■□□□□ 0.19
CCDC42-203ENST00000581598 LSM4Q9Y4Z0 139 aaKnown RBP16.25■□□□□ 0.19
CCDC42-203ENST00000581598 DNAH9Q9NYC9 4486 aa16.25■□□□□ 0.19
CCDC42-203ENST00000581598 IGKV1-6A0A0C4DH72 117 aa16.24■□□□□ 0.19
CCDC42-203ENST00000581598 PROP1O75360 226 aa16.24■□□□□ 0.19
CCDC42-203ENST00000581598 CD3DP04234 171 aa16.24■□□□□ 0.19
CCDC42-203ENST00000581598 HLA-DMAP28067 261 aa16.24■□□□□ 0.19
CCDC42-203ENST00000581598 DYRK1AQ13627 763 aa16.24■□□□□ 0.19
CCDC42-203ENST00000581598 ASPHD1Q5U4P2 390 aa16.24■□□□□ 0.19
CCDC42-203ENST00000581598 GLDNQ6ZMI3 551 aaPredicted RBP16.24■□□□□ 0.19
CCDC42-203ENST00000581598 OR1N2Q8NGR9 330 aa16.24■□□□□ 0.19
CCDC42-203ENST00000581598 FBXL15Q9H469 300 aa16.24■□□□□ 0.19
CCDC42-203ENST00000581598 FBXO7Q9Y3I1 522 aa16.24■□□□□ 0.19
CCDC42-203ENST00000581598 NUBP2Q9Y5Y2 271 aa16.24■□□□□ 0.19
CCDC42-203ENST00000581598 SPDEFO95238 335 aa16.23■□□□□ 0.19
CCDC42-203ENST00000581598 CTXN2P0C2S0 81 aa16.23■□□□□ 0.19
CCDC42-203ENST00000581598 HRH1P35367 487 aa16.23■□□□□ 0.19
CCDC42-203ENST00000581598 TMEM267Q0VDI3 215 aaPredicted RBP16.23■□□□□ 0.19
CCDC42-203ENST00000581598 CDK10Q15131 360 aa16.23■□□□□ 0.19
CCDC42-203ENST00000581598 STEAP1BQ6NZ63 245 aa16.23■□□□□ 0.19
CCDC42-203ENST00000581598 OR5H2Q8NGV7 314 aa16.23■□□□□ 0.19
CCDC42-203ENST00000581598 FOXA2Q9Y261 457 aaPredicted RBP16.23■□□□□ 0.19
CCDC42-203ENST00000581598 H7C2Y5 167 aa16.22■□□□□ 0.19
CCDC42-203ENST00000581598 SOX15O60248 233 aa16.22■□□□□ 0.19
CCDC42-203ENST00000581598 AKAIN1P0CW23 69 aa16.22■□□□□ 0.19
CCDC42-203ENST00000581598 EGR2P11161 476 aaPredicted RBP16.22■□□□□ 0.19
CCDC42-203ENST00000581598 INPP1P49441 399 aa16.22■□□□□ 0.19
CCDC42-203ENST00000581598 ARPC4P59998 168 aa16.22■□□□□ 0.19
CCDC42-203ENST00000581598 GNB1P62873 340 aa16.22■□□□□ 0.19
CCDC42-203ENST00000581598 ECSCRQ19T08 205 aa16.22■□□□□ 0.19
CCDC42-203ENST00000581598 IGSF11Q5DX21 431 aa16.22■□□□□ 0.19
CCDC42-203ENST00000581598 ZNF57Q68EA5 555 aaPredicted RBP16.22■□□□□ 0.19
CCDC42-203ENST00000581598 OVCH2Q7RTZ1 564 aa16.22■□□□□ 0.19
CCDC42-203ENST00000581598 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.22■□□□□ 0.19
CCDC42-203ENST00000581598 OR4C16Q8NGL9 310 aa16.22■□□□□ 0.19
CCDC42-203ENST00000581598 ZNF221Q9UK13 617 aa16.22■□□□□ 0.19
CCDC42-203ENST00000581598 RNF150Q9ULK6 438 aa16.22■□□□□ 0.19
CCDC42-203ENST00000581598 TBC1D24Q9ULP9 559 aa16.22■□□□□ 0.19
CCDC42-203ENST00000581598 SORL1Q92673 2214 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 TRBV6-7A0A0A0MS04 114 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 A0A1W2PN81 502 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 M0QYG6 137 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 FCN1O00602 326 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 PLA2G10O15496 165 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 RAB3DO95716 219 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 PMP2P02689 132 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 NHLRC4P0CG21 123 aaPredicted RBP16.21■□□□□ 0.19
CCDC42-203ENST00000581598 CHRNA7P36544 502 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 ECI1P42126 302 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 MEF2DQ14814 521 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 PLGLAQ15195 96 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 PSG5Q15238 335 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 AKIRIN2Q53H80 203 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 RNASE10Q5GAN6 216 aaKnown RBP16.21■□□□□ 0.19
CCDC42-203ENST00000581598 ZNF562Q6V9R5 426 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 PDPNQ86YL7 162 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 OR4D10Q8NGI6 311 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 TSNAXQ99598 290 aaKnown RBP16.21■□□□□ 0.19
CCDC42-203ENST00000581598 C7orf50Q9BRJ6 194 aaKnown RBP16.21■□□□□ 0.19
CCDC42-203ENST00000581598 TINAGL1Q9GZM7 467 aaPredicted RBP16.21■□□□□ 0.19
CCDC42-203ENST00000581598 HRASLSQ9HDD0 168 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 RDH8Q9NYR8 311 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 GAB2Q9UQC2 676 aa16.21■□□□□ 0.19
CCDC42-203ENST00000581598 ZNF735P0CB33 412 aa16.2■□□□□ 0.18
CCDC42-203ENST00000581598 FAUP35544 74 aaKnown RBP16.2■□□□□ 0.18
CCDC42-203ENST00000581598 RFX2P48378 723 aa16.2■□□□□ 0.18
CCDC42-203ENST00000581598 ASAH1Q13510 395 aa16.2■□□□□ 0.18
CCDC42-203ENST00000581598 ZNF383Q8NA42 475 aa16.2■□□□□ 0.18
CCDC42-203ENST00000581598 PRR25Q96S07 402 aa16.2■□□□□ 0.18
CCDC42-203ENST00000581598 TPSG1Q9NRR2 321 aa16.2■□□□□ 0.18
CCDC42-203ENST00000581598 EHFQ9NZC4 300 aa16.2■□□□□ 0.18
CCDC42-203ENST00000581598 METTL1Q9UBP6 276 aaKnown RBP16.2■□□□□ 0.18
CCDC42-203ENST00000581598 IGKV1-16P04430 117 aa16.19■□□□□ 0.18
CCDC42-203ENST00000581598 LGALS1P09382 135 aaKnown RBP16.19■□□□□ 0.18
CCDC42-203ENST00000581598 ZNF429Q86V71 674 aa16.19■□□□□ 0.18
CCDC42-203ENST00000581598 PPP1R27Q86WC6 154 aa16.19■□□□□ 0.18
CCDC42-203ENST00000581598 H1FOOQ8IZA3 346 aaPredicted RBP16.19■□□□□ 0.18
CCDC42-203ENST00000581598 ARRDC1Q8N5I2 433 aa16.19■□□□□ 0.18
CCDC42-203ENST00000581598 WWC2-AS2Q96NR7 200 aa16.19■□□□□ 0.18
CCDC42-203ENST00000581598 OR5B12Q96R08 314 aa16.19■□□□□ 0.18
CCDC42-203ENST00000581598 ZNF256Q9Y2P7 627 aaPredicted RBP16.19■□□□□ 0.18
CCDC42-203ENST00000581598 NAP1L6A6NFF2 107 aa16.18■□□□□ 0.18
CCDC42-203ENST00000581598 BET1O15155 118 aa16.18■□□□□ 0.18
CCDC42-203ENST00000581598 TUSC2O75896 110 aa16.18■□□□□ 0.18
CCDC42-203ENST00000581598 APOA2P02652 100 aa16.18■□□□□ 0.18
CCDC42-203ENST00000581598 FAAP20Q6NZ36 180 aa16.18■□□□□ 0.18
CCDC42-203ENST00000581598 DHRS11Q6UWP2 260 aa16.18■□□□□ 0.18
CCDC42-203ENST00000581598 DRAXINQ8NBI3 349 aaPredicted RBP16.18■□□□□ 0.18
CCDC42-203ENST00000581598 OR10J5Q8NHC4 309 aa16.18■□□□□ 0.18
CCDC42-203ENST00000581598 DCUN1D4Q92564 292 aa16.18■□□□□ 0.18
CCDC42-203ENST00000581598 SLC2A8Q9NY64 477 aa16.18■□□□□ 0.18
CCDC42-203ENST00000581598 LINC01619G3V211 115 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms