RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 KRTAP10-9P60411 292 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 RHOBP62745 196 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 C17orf67Q0P5P2 114 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 OCIAD2Q56VL3 154 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 CXorf66Q5JRM2 361 aaPredicted RBP6.34□□□□□ -1.39
TVP23C-208ENST00000581273 SLC25A47Q6Q0C1 308 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 C12orf54Q6X4T0 127 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 PRSS41Q7RTY9 318 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 OSR2Q8N2R0 312 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 TMEM256Q8N2U0 113 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 SGMS2Q8NHU3 365 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 PSMF1Q92530 271 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 RAB1CQ92928 201 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 TNFRSF14Q92956 283 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 BORCS8Q96FH0 119 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 SFRP2Q96HF1 295 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 KCNS1Q96KK3 526 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 ALKBH3Q96Q83 286 aaPredicted RBP6.34□□□□□ -1.39
TVP23C-208ENST00000581273 MRPL13Q9BYD1 178 aaKnown RBP6.34□□□□□ -1.39
TVP23C-208ENST00000581273 NXF5Q9H1B4 397 aaKnown RBP6.34□□□□□ -1.39
TVP23C-208ENST00000581273 ZNF442Q9H7R0 627 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 HRASLS2Q9NWW9 162 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 IL36BQ9NZH7 164 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 PIGLQ9Y2B2 252 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 LHFPL6Q9Y693 200 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 VPS13CQ709C8 3753 aa6.34□□□□□ -1.39
TVP23C-208ENST00000581273 CACNA1CQ13936 2221 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 TRAV9-2A0A087WT02 112 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 A0A1W2PRS3 328 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 DPRXA6NFQ7 191 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 OR5B21A6NL26 309 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 TMEM238C9JI98 176 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 C11orf94C9JXX5 98 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 SERF1AO75920 110 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 HLA-DQA1P01909 254 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 CLPSP04118 112 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 GPX1P07203 203 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 CD55P08174 381 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 CD1BP29016 333 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 TSPOP30536 169 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 ADMP35318 185 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 OPRM1P35372 400 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 WNT5AP41221 380 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 FUT6P51993 359 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 RRADP55042 308 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 PAX9P55771 341 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 CLDN18P56856 261 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 KRTDAPP60985 99 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 HTD2P86397 168 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 SLC38A11Q08AI6 406 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 MMDQ15546 238 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 ZNF726P1Q15940 193 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 TSPO2Q5TGU0 170 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 RAET1LQ5VY80 246 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 RASL11AQ6T310 242 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 TCF24Q7RTU0 167 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 LINC00596Q86U02 117 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 LRP11Q86VZ4 500 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 NIT1Q86X76 327 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 STPG4Q8N801 248 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 OR10G9Q8NGN4 311 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 OR10G7Q8NGN6 311 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 OXGR1Q96P68 337 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 PMCHL2Q9BQD1 86 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 MRPL18Q9H0U6 180 aaKnown RBP6.33□□□□□ -1.4
TVP23C-208ENST00000581273 CST9LQ9H4G1 147 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 C12orf49Q9H741 205 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 SH3BGRL2Q9UJC5 107 aa6.33□□□□□ -1.4
TVP23C-208ENST00000581273 LIPT2A6NK58 231 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 GJE1A6NN92 205 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 HRKO00198 91 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 ZG16O60844 167 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 MPDU1O75352 247 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 TUSC2O75896 110 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 NDUFB8O95169 186 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 HLA-DOBP13765 273 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 ZNF17P17021 662 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 F2RP25116 425 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 TFPI2P48307 235 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 AMTP48728 403 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 LHX2P50458 406 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 FGF8P55075 233 aaPredicted RBP6.32□□□□□ -1.4
TVP23C-208ENST00000581273 MFAP5Q13361 173 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 HIST3H3Q16695 136 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 RPEL1Q2QD12 228 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 MRPL54Q6P161 138 aaKnown RBP6.32□□□□□ -1.4
TVP23C-208ENST00000581273 TREML4Q6UXN2 200 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 C1orf229Q6ZS94 237 aaPredicted RBP6.32□□□□□ -1.4
TVP23C-208ENST00000581273 GTF2H5Q6ZYL4 71 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.32□□□□□ -1.4
TVP23C-208ENST00000581273 KMT5CQ86Y97 462 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 SAXO1Q8IYX7 474 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 LYG1Q8N1E2 194 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 ZADH2Q8N4Q0 377 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 OR10P1Q8NGE3 313 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 OR4P4Q8NGL7 312 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 OR11L1Q8NGX0 322 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 OR1L3Q8NH93 324 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 PLPPR1Q8TBJ4 325 aa6.32□□□□□ -1.4
TVP23C-208ENST00000581273 ADIPOR1Q96A54 375 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms