RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SLC25A33Q9BSK2 321 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 CHIAQ9BZP6 476 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 TMEM222Q9H0R3 208 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 PLSCR3Q9NRY6 295 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 NUDT15Q9NV35 164 aa8.3□□□□□ -1.08
CCDC47-203ENST00000580986 TEX13DA0A0J9YY54 714 aaPredicted RBP8.29□□□□□ -1.08
CCDC47-203ENST00000580986 DUXBA0A1W2PPF3 345 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 TRIM77I1YAP6 450 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 RRHO14718 337 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 SHOXO15266 292 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 NBR2O15453 112 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 GPR137BO60478 399 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 CREBL2O60519 120 aaPredicted RBP8.29□□□□□ -1.08
CCDC47-203ENST00000580986 RAMP3O60896 148 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 PEX14O75381 377 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 ATG12O94817 140 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 CDS2O95674 445 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 IGLV2-23P01705 113 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 SERPINE2P07093 398 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 VSIG10L2P0DP72 767 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 NQO2P16083 231 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 MMDQ15546 238 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 RGS21Q2M5E4 152 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 TMED4Q7Z7H5 227 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 Q8N3U1 123 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 C5orf56Q8N8D9 126 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 LRTM2Q8N967 370 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 Q8N9W7 124 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 TEX45Q8NA69 505 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 ADAD2Q8NCV1 583 aaKnown RBP8.29□□□□□ -1.08
CCDC47-203ENST00000580986 GLYATL2Q8WU03 294 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 TMEM56Q96MV1 263 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 TP53RKQ96S44 253 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 GPHA2Q96T91 129 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 NPFFR1Q9GZQ6 430 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 BET1LQ9NYM9 111 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 KIAA1456Q9P272 454 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 ZNF580Q9UK33 172 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 TMEM56-RWDD3S4R434 201 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 NF1P21359 2839 aa8.29□□□□□ -1.08
CCDC47-203ENST00000580986 MARCH11A6NNE9 402 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 ARPC1BO15143 372 aaKnown RBP8.28□□□□□ -1.08
CCDC47-203ENST00000580986 CHST1O43916 411 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 PRAF2O60831 178 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 DUS4LO95620 317 aaKnown RBP8.28□□□□□ -1.08
CCDC47-203ENST00000580986 HLA-DRB1P01911 266 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 IL5P05113 134 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 CRYGBP07316 175 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 IL6RP08887 468 aaPredicted RBP8.28□□□□□ -1.08
CCDC47-203ENST00000580986 H2AFB2P0C5Z0 115 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 OR5AC1P0C628 307 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 OR4E1P0C645 316 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 AKR1C4P17516 323 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 CD24P25063 80 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 RPS16P62249 146 aaKnown RBP8.28□□□□□ -1.08
CCDC47-203ENST00000580986 TMEM187Q14656 261 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 C5orf64Q2M2E5 130 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 VMA21Q3ZAQ7 101 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 FBLN7Q53RD9 439 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 FAM219AQ8IW50 185 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 PUSL1Q8N0Z8 303 aaKnown RBP8.28□□□□□ -1.08
CCDC47-203ENST00000580986 Q8N2B8 174 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 MINDY2Q8NBR6 621 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 OR4A5Q8NH83 315 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 RBPMSQ93062 196 aaKnown RBP8.28□□□□□ -1.08
CCDC47-203ENST00000580986 RHOVQ96L33 236 aa8.28□□□□□ -1.08
CCDC47-203ENST00000580986 A0A0B4J2A0 478 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 C9orf170A2RU37 121 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 SRRM4A7MD48 611 aaKnown RBP8.27□□□□□ -1.09
CCDC47-203ENST00000580986 TSPAN9O75954 239 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 S1PR2O95136 353 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 SFT2D2O95562 160 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 AMY1AP04745 511 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 SAA1P0DJI8 122 aaPredicted RBP8.27□□□□□ -1.09
CCDC47-203ENST00000580986 F2RL1P55085 397 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 ERVK-16P61578 105 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 DHRS2Q13268 280 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 PPP1R1AQ13522 171 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 PSG5Q15238 335 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 LY6EQ16553 131 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 OR2B11Q5JQS5 317 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 LYG2Q86SG7 212 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 PPP1R27Q86WC6 154 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 TMEM219Q86XT9 240 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 LGI3Q8N145 548 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 SEC22AQ96IW7 307 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 CACFD1Q9UGQ2 172 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 SHPKQ9UHJ6 478 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 FLVCR2Q9UPI3 526 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 SIGLEC9Q9Y336 463 aa8.27□□□□□ -1.09
CCDC47-203ENST00000580986 TRAV6A0A075B6T7 132 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 NCBP2LA6PVI3 153 aaKnown RBP8.26□□□□□ -1.09
CCDC47-203ENST00000580986 SNRPGP15A8MWD9 76 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 KCNAB3O43448 404 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 KBTBD11O94819 623 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 OR2A4O95047 310 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 NDUFA7O95182 113 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 DHFRP00374 187 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 IGKV1-39P01597 117 aa8.26□□□□□ -1.09
CCDC47-203ENST00000580986 HLA-AP01891 365 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms