RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	CMTM6	Q9NX76	183 aa		4.23	□□□□□ -1.73
KPNB1-209	ENST00000580158	ZNF221	Q9UK13	617 aa		4.23	□□□□□ -1.73
KPNB1-209	ENST00000580158	TBC1D24	Q9ULP9	559 aa		4.23	□□□□□ -1.73
KPNB1-209	ENST00000580158	ST3GAL6	Q9Y274	331 aa		4.23	□□□□□ -1.73
KPNB1-209	ENST00000580158	MCRIP1	C9JLW8	97 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	IGHV3-23	P01764	117 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	MAS1	P04201	325 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	CTSD	P07339	412 aa	Predicted RBP	4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	CRISP1	P54107	249 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	CCL18	P55774	89 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	SSBP2	P81877	361 aa	Predicted RBP	4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	NHLH2	Q02577	135 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	PJVK	Q0ZLH3	352 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	GNMT	Q14749	295 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	PTGES3	Q15185	160 aa	Known RBP	4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	TNXA	Q16473	311 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	FAM98B	Q52LJ0	330 aa	Known RBP	4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	RPL39P5	Q59GN2	51 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	TTC32	Q5I0X7	151 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	LY6G6F	Q5SQ64	297 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	UNQ9165/PRO28630	Q6UXU0	137 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	PDPN	Q86YL7	162 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	OR13C9	Q8NGT0	318 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	OR10K1	Q8NGX5	313 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	ANP32B	Q92688	251 aa	Known RBP	4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	GALM	Q96C23	342 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	PELI1	Q96FA3	418 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	TAF9B	Q9HBM6	251 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	ARL8B	Q9NVJ2	186 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	FAT1	Q14517	4588 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	HMCN2	Q8NDA2	5059 aa		4.22	□□□□□ -1.73
KPNB1-209	ENST00000580158	TEX48	A0A1B0GUV7	120 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	TRIAP1	O43715	76 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	CCDC22	O60826	627 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	IGKV1-16	P04430	117 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	SPP1	P10451	314 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	HTN3	P15516	51 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	RCC1	P18754	421 aa	Predicted RBP	4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	SLC2A5	P22732	501 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	TFPI2	P48307	235 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	PAFAH1B2	P68402	229 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	CBX3	Q13185	183 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	GINS1	Q14691	196 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	MPV17L	Q2QL34	196 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	DMKN	Q6E0U4	476 aa	Predicted RBP	4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	ZNF554	Q86TJ5	538 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	SLC35F2	Q8IXU6	374 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	ADGRG5	Q8IZF4	528 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	TTC9C	Q8N5M4	171 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	OR52N1	Q8NH53	320 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	TNFAIP8L1	Q8WVP5	186 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	SRSF12	Q8WXF0	261 aa	Known RBP	4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	ACOT12	Q8WYK0	555 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	S100A13	Q99584	98 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	SPIN2A	Q99865	258 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	HOPX	Q9BPY8	73 aa	Predicted RBP	4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	SPIN2B	Q9BPZ2	258 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	FAM192A	Q9GZU8	254 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	IFI27L2	Q9H2X8	130 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	LRRC42	Q9Y546	428 aa		4.21	□□□□□ -1.74
KPNB1-209	ENST00000580158	TRBV7-1	A0A0A6YYK4	115 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158		A0A1W2PPQ1	181 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	TMEM189	A5PLL7	270 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	DPPA5	A6NC42	116 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	METTL15	A6NJ78	407 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	NME4	O00746	187 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	GEMIN2	O14893	280 aa	Known RBP	4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	CA11	O75493	328 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	GPX5	O75715	221 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	DHFR	P00374	187 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	REG1A	P05451	166 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	ATP6V1B2	P21281	511 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	PSMB6	P28072	239 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	FUS	P35637	526 aa	Known RBP eCLIP	4.2	□□□□□ -1.74	6e-7	■□□□□ 9.7
KPNB1-209	ENST00000580158	CAPG	P40121	348 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	ASIP	P42127	132 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	RBM11	P57052	281 aa	Known RBP	4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	KRTAP10-1	P60331	282 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	ERVFC1-1	P60608	527 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	RPS27A	P62979	156 aa	Known RBP	4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	NHLRC3	Q5JS37	347 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	TMEM88	Q6PEY1	159 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	PLET1	Q6UQ28	207 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	GSG1L	Q6UXU4	331 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	TMEM116	Q8NCL8	245 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	OR5D14	Q8NGL3	314 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	OR13C3	Q8NGS6	347 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	OR10AC1	Q8NH08	325 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	TLCD1	Q96CP7	247 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	ABHD14B	Q96IU4	210 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	ABHD1	Q96SE0	405 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	NIPSNAP3B	Q9BS92	247 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	MLST8	Q9BVC4	326 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	METTL9	Q9H1A3	318 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158		Q9H8V8	135 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	SPACA1	Q9HBV2	294 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	DAZ1	Q9NQZ3	744 aa	Known RBP	4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	SLC35D1	Q9NTN3	355 aa		4.2	□□□□□ -1.74
KPNB1-209	ENST00000580158	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.2	□□□□□ -1.74

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