RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 FOLR2P14207 255 aa13.53□□□□□ -0.24
MKS1-209ENST00000580127 C15orf32Q32M92 178 aa13.53□□□□□ -0.24
MKS1-209ENST00000580127 FAM106AQ4KMX7 169 aa13.53□□□□□ -0.24
MKS1-209ENST00000580127 OGFRL1Q5TC84 451 aaPredicted RBP13.53□□□□□ -0.24
MKS1-209ENST00000580127 DEFB125Q8N687 156 aa13.53□□□□□ -0.24
MKS1-209ENST00000580127 GFI1Q99684 422 aa13.53□□□□□ -0.24
MKS1-209ENST00000580127 RETNQ9HD89 108 aa13.53□□□□□ -0.24
MKS1-209ENST00000580127 ZNF257Q9Y2Q1 563 aa13.53□□□□□ -0.24
MKS1-209ENST00000580127 A0A075B6Q4 140 aa13.52□□□□□ -0.25
MKS1-209ENST00000580127 TMEM272A0A1B0GTI8 110 aa13.52□□□□□ -0.25
MKS1-209ENST00000580127 LGALS9O00182 355 aa13.52□□□□□ -0.25
MKS1-209ENST00000580127 PRH1P02810 166 aa13.52□□□□□ -0.25
MKS1-209ENST00000580127 CTXN2P0C2S0 81 aa13.52□□□□□ -0.25
MKS1-209ENST00000580127 MLLT11Q13015 90 aaPredicted RBP13.52□□□□□ -0.25
MKS1-209ENST00000580127 IDO2Q6ZQW0 420 aa13.52□□□□□ -0.25
MKS1-209ENST00000580127 VSTM2AQ8TAG5 236 aa13.52□□□□□ -0.25
MKS1-209ENST00000580127 DDB2Q92466 427 aa13.52□□□□□ -0.25
MKS1-209ENST00000580127 FAM110AQ9BQ89 295 aa13.52□□□□□ -0.25
MKS1-209ENST00000580127 ZNF430Q9H8G1 570 aaPredicted RBP13.52□□□□□ -0.25
MKS1-209ENST00000580127 KCNK7Q9Y2U2 307 aa13.52□□□□□ -0.25
MKS1-209ENST00000580127 RBMY1BA6NDE4 496 aaKnown RBP13.51□□□□□ -0.25
MKS1-209ENST00000580127 RBMY1EA6NEQ0 496 aaKnown RBP13.51□□□□□ -0.25
MKS1-209ENST00000580127 C2orf70A6NJV1 201 aa13.51□□□□□ -0.25
MKS1-209ENST00000580127 CASQ2O14958 399 aaPredicted RBP13.51□□□□□ -0.25
MKS1-209ENST00000580127 RGS10O43665 173 aa13.51□□□□□ -0.25
MKS1-209ENST00000580127 CD7P09564 240 aa13.51□□□□□ -0.25
MKS1-209ENST00000580127 RBMY1DP0C7P1 496 aaKnown RBP13.51□□□□□ -0.25
MKS1-209ENST00000580127 GNB3P16520 340 aa13.51□□□□□ -0.25
MKS1-209ENST00000580127 CD36P16671 472 aa13.51□□□□□ -0.25
MKS1-209ENST00000580127 RAB6AP20340 208 aa13.51□□□□□ -0.25
MKS1-209ENST00000580127 RPS25P62851 125 aaKnown RBP13.51□□□□□ -0.25
MKS1-209ENST00000580127 IRF3Q14653 427 aa13.51□□□□□ -0.25
MKS1-209ENST00000580127 HES5Q5TA89 166 aa13.51□□□□□ -0.25
MKS1-209ENST00000580127 Q6ZS49 121 aa13.51□□□□□ -0.25
MKS1-209ENST00000580127 GPHB5Q86YW7 130 aa13.51□□□□□ -0.25
MKS1-209ENST00000580127 H1FOOQ8IZA3 346 aaPredicted RBP13.51□□□□□ -0.25
MKS1-209ENST00000580127 CCDC90BQ9GZT6 254 aa13.51□□□□□ -0.25
MKS1-209ENST00000580127 OR51E2Q9H255 320 aa13.51□□□□□ -0.25
MKS1-209ENST00000580127 FCGR3BO75015 233 aa13.5□□□□□ -0.25
MKS1-209ENST00000580127 OR2J3O76001 311 aa13.5□□□□□ -0.25
MKS1-209ENST00000580127 OR2C1O95371 312 aa13.5□□□□□ -0.25
MKS1-209ENST00000580127 HIST1H1DP16402 221 aaKnown RBP13.5□□□□□ -0.25
MKS1-209ENST00000580127 MAS1LP35410 378 aa13.5□□□□□ -0.25
MKS1-209ENST00000580127 MRGPRG-AS1Q2M3A8 158 aa13.5□□□□□ -0.25
MKS1-209ENST00000580127 OR4A47Q6IF82 309 aa13.5□□□□□ -0.25
MKS1-209ENST00000580127 ZNF645Q8N7E2 425 aa13.5□□□□□ -0.25
MKS1-209ENST00000580127 AIFM2Q9BRQ8 373 aa13.5□□□□□ -0.25
MKS1-209ENST00000580127 ZC4H2Q9NQZ6 224 aa13.5□□□□□ -0.25
MKS1-209ENST00000580127 FBXL7Q9UJT9 491 aa13.5□□□□□ -0.25
MKS1-209ENST00000580127 ZNF320A2RRD8 509 aa13.49□□□□□ -0.25
MKS1-209ENST00000580127 LINC00473A8K010 186 aa13.49□□□□□ -0.25
MKS1-209ENST00000580127 RBMXL2O75526 392 aaKnown RBP13.49□□□□□ -0.25
MKS1-209ENST00000580127 SAA1P0DJI8 122 aaPredicted RBP13.49□□□□□ -0.25
MKS1-209ENST00000580127 HIST1H1BP16401 226 aaKnown RBP13.49□□□□□ -0.25
MKS1-209ENST00000580127 CBLN1P23435 193 aa13.49□□□□□ -0.25
MKS1-209ENST00000580127 ZNF45Q02386 682 aa13.49□□□□□ -0.25
MKS1-209ENST00000580127 ZNF57Q68EA5 555 aaPredicted RBP13.49□□□□□ -0.25
MKS1-209ENST00000580127 OR52B4Q8NGK2 314 aa13.49□□□□□ -0.25
MKS1-209ENST00000580127 MAFIPQ8WZ33 124 aa13.49□□□□□ -0.25
MKS1-209ENST00000580127 MGLLQ99685 303 aa13.49□□□□□ -0.25
MKS1-209ENST00000580127 OR2W1Q9Y3N9 320 aa13.49□□□□□ -0.25
MKS1-209ENST00000580127 CSMD3Q7Z407 3707 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 TRAV1-2A0A0B4J238 106 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 PPP5D1E7EU14 171 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 MFNGO00587 321 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 DTYMKP23919 212 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 MYL9P24844 172 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 ARL3P36405 182 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 FABP5Q01469 135 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 KCTD9Q7L273 389 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 OR4S2Q8NH73 311 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 EEF1AKMT3Q96AZ1 226 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 FYTTD1Q96QD9 318 aaKnown RBP13.48□□□□□ -0.25
MKS1-209ENST00000580127 OR2A7Q96R45 310 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 HSD17B10Q99714 261 aaKnown RBP13.48□□□□□ -0.25
MKS1-209ENST00000580127 ST6GALNAC5Q9BVH7 336 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 ATG5Q9H1Y0 275 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 DUSP21Q9H596 190 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 SLC2A9Q9NRM0 540 aa13.48□□□□□ -0.25
MKS1-209ENST00000580127 IFITM5A6NNB3 132 aa13.47□□□□□ -0.25
MKS1-209ENST00000580127 NPIPB5A8MRT5 1133 aa13.47□□□□□ -0.25
MKS1-209ENST00000580127 RAB27BO00194 218 aa13.47□□□□□ -0.25
MKS1-209ENST00000580127 HRASP01112 189 aa13.47□□□□□ -0.25
MKS1-209ENST00000580127 DEFA4P12838 97 aa13.47□□□□□ -0.25
MKS1-209ENST00000580127 RPL27AP46776 148 aaKnown RBP13.47□□□□□ -0.25
MKS1-209ENST00000580127 WDR89Q96FK6 387 aaPredicted RBP13.47□□□□□ -0.25
MKS1-209ENST00000580127 C5orf30Q96GV9 206 aa13.47□□□□□ -0.25
MKS1-209ENST00000580127 GGTLC1Q9BX51 225 aa13.47□□□□□ -0.25
MKS1-209ENST00000580127 DCSTAMPQ9H295 470 aa13.47□□□□□ -0.25
MKS1-209ENST00000580127 LOC102724200A0A096LPH7 203 aaPredicted RBP13.46□□□□□ -0.25
MKS1-209ENST00000580127 J3QRK9 145 aa13.46□□□□□ -0.25
MKS1-209ENST00000580127 CLEC19AQ6UXS0 136 aa13.46□□□□□ -0.25
MKS1-209ENST00000580127 RBPMS2Q6ZRY4 209 aaKnown RBP13.46□□□□□ -0.25
MKS1-209ENST00000580127 PRSS48Q7RTY5 328 aa13.46□□□□□ -0.25
MKS1-209ENST00000580127 MARC2Q969Z3 335 aa13.46□□□□□ -0.25
MKS1-209ENST00000580127 CXorf58Q96LI9 332 aa13.46□□□□□ -0.25
MKS1-209ENST00000580127 RBMX2Q9Y388 322 aaKnown RBP13.46□□□□□ -0.25
MKS1-209ENST00000580127 SACSQ9NZJ4 4579 aa13.46□□□□□ -0.26
MKS1-209ENST00000580127 TRBV7-1A0A0A6YYK4 115 aa13.45□□□□□ -0.26
MKS1-209ENST00000580127 TRAV25A0A0B4J276 109 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms