RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 E9PLN8 166 aa11.54□□□□□ -0.56
TRAPPC8-207ENST00000580104 RAB29O14966 203 aa11.54□□□□□ -0.56
TRAPPC8-207ENST00000580104 TNFRSF1AP19438 455 aa11.54□□□□□ -0.56
TRAPPC8-207ENST00000580104 HGFACQ04756 655 aa11.54□□□□□ -0.56
TRAPPC8-207ENST00000580104 MMD2Q8IY49 270 aa11.54□□□□□ -0.56
TRAPPC8-207ENST00000580104 SSBP3Q9BWW4 388 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC8-207ENST00000580104 NBASA2RRP1 2371 aa11.54□□□□□ -0.56
TRAPPC8-207ENST00000580104 TMEM210A6NLX4 147 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 RPL31P62899 125 aaKnown RBP11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 TMEM140Q9NV12 185 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 PRRG2O14669 202 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 P01737 135 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 COL8A1P27658 744 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 TNXAQ16473 311 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 LRRC10Q5BKY1 277 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 C10orf113Q5VZT2 155 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 DNASE2BQ8WZ79 361 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 ADTRPQ96IZ2 230 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 GSX1Q9H4S2 264 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 PRNDQ9UKY0 176 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 RRHO14718 337 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 CD99P14209 185 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 RPL11P62913 178 aaKnown RBP11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 REPIN1Q9BWE0 567 aaKnown RBP11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 PNRC2Q9NPJ4 139 aaKnown RBP11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 UTRNP46939 3433 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 C12orf77C9JDV5 145 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 MPDU1O75352 247 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 COX7A1P24310 79 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 LTBRP36941 435 aa11.53□□□□□ -0.56
TRAPPC8-207ENST00000580104 RNF2Q99496 336 aa11.52□□□□□ -0.56
TRAPPC8-207ENST00000580104 DCTN5Q9BTE1 182 aa11.52□□□□□ -0.56
TRAPPC8-207ENST00000580104 SHANK1Q9Y566 2161 aa11.52□□□□□ -0.56
TRAPPC8-207ENST00000580104 CLEC3BP05452 202 aa11.52□□□□□ -0.56
TRAPPC8-207ENST00000580104 C1QTNF9P0C862 333 aa11.52□□□□□ -0.56
TRAPPC8-207ENST00000580104 MPV17P39210 176 aa11.52□□□□□ -0.56
TRAPPC8-207ENST00000580104 COX19Q49B96 90 aa11.52□□□□□ -0.56
TRAPPC8-207ENST00000580104 INO80CQ6PI98 192 aaPredicted RBP11.52□□□□□ -0.56
TRAPPC8-207ENST00000580104 TMEM191AQ9H0A3 160 aa11.52□□□□□ -0.56
TRAPPC8-207ENST00000580104 RIF1Q5UIP0 2472 aaKnown RBP11.52□□□□□ -0.57
TRAPPC8-207ENST00000580104 TFF1P04155 84 aa11.52□□□□□ -0.57
TRAPPC8-207ENST00000580104 C1orf210Q8IVY1 113 aa11.52□□□□□ -0.57
TRAPPC8-207ENST00000580104 KLF14Q8TD94 323 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC8-207ENST00000580104 SCO2A0A1W2PP80 73 aa11.52□□□□□ -0.57
TRAPPC8-207ENST00000580104 CTSSP25774 331 aa11.52□□□□□ -0.57
TRAPPC8-207ENST00000580104 LRTM2Q8N967 370 aa11.52□□□□□ -0.57
TRAPPC8-207ENST00000580104 C1QTNF5Q9BXJ0 243 aa11.52□□□□□ -0.57
TRAPPC8-207ENST00000580104 WNT10AQ9GZT5 417 aa11.52□□□□□ -0.57
TRAPPC8-207ENST00000580104 A0A1W2PRD5 423 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 A0A1W2PRF3 423 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 A0A1W2PRM7 423 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 ARL16Q0P5N6 197 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 PMS2CLQ68D20 193 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 GAL3ST2Q9H3Q3 398 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 PPP1R14DQ9NXH3 145 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 TCF19Q9Y242 345 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 DOCK11Q5JSL3 2073 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 LRRK1Q38SD2 2015 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 A0A1W2PN81 502 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 GABRA6Q16445 453 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 RPL39P5Q59GN2 51 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 BHLHA15Q7RTS1 189 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 SSX8Q7RTT4 187 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 PLPPR1Q8TBJ4 325 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 WBP1Q96G27 269 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 RAMP3O60896 148 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 SMPD2O60906 423 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 NAPSAO96009 420 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 COTL1Q14019 142 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 ZIC4Q8N9L1 334 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 CCL13Q99616 98 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 PAXXQ9BUH6 204 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 TMSB15BA0A087X1C1 80 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 GCSAMLQ5JQS6 135 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 OR4B1Q8NGF8 309 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 OR2T6Q8NHC8 308 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 NABP1Q96AH0 204 aa11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 GMPPAQ96IJ6 420 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC8-207ENST00000580104 WIPF3A6NGB9 483 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 OR2J3O76001 311 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 LINC00869P0C866 280 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 DNM1P46Q6ZS02 220 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 DEFB123Q8N688 67 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 SIGLEC12Q96PQ1 595 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 THSD7BQ9C0I4 1608 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 H3BTX0 84 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 MGST3O14880 152 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 CD82P27701 267 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 NUBP1P53384 320 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 FOXG1P55316 489 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 CCL8P80075 99 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 PPP1R32Q7Z5V6 425 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 STPG3Q8N7X2 389 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 OR2V2Q96R30 315 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 NDUFAF3Q9BU61 184 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 IGLV3-12A0A075B6K2 115 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 VENTXO95231 258 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 AMBPP02760 352 aa11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 HIST1H1EP10412 219 aaKnown RBP11.5□□□□□ -0.57
TRAPPC8-207ENST00000580104 GCHFRP30047 84 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms