RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 MRPS26Q9BYN8 205 aaKnown RBP11.5□□□□□ -0.57
SS18-212ENST00000579061 SMIM31A0A1B0GVY4 71 aa11.49□□□□□ -0.57
SS18-212ENST00000579061 LINC01619G3V211 115 aa11.49□□□□□ -0.57
SS18-212ENST00000579061 TRGV3P03979 118 aa11.49□□□□□ -0.57
SS18-212ENST00000579061 EIF4EP06730 217 aaKnown RBP11.49□□□□□ -0.57
SS18-212ENST00000579061 SAA1P0DJI8 122 aaPredicted RBP11.49□□□□□ -0.57
SS18-212ENST00000579061 TPPP2P59282 170 aa11.49□□□□□ -0.57
SS18-212ENST00000579061 TAS2R46P59540 309 aa11.49□□□□□ -0.57
SS18-212ENST00000579061 DHRS11Q6UWP2 260 aa11.49□□□□□ -0.57
SS18-212ENST00000579061 MMD2Q8IY49 270 aa11.49□□□□□ -0.57
SS18-212ENST00000579061 VSTM2AQ8TAG5 236 aa11.49□□□□□ -0.57
SS18-212ENST00000579061 CASTOR1Q8WTX7 329 aa11.49□□□□□ -0.57
SS18-212ENST00000579061 OR5B12Q96R08 314 aa11.49□□□□□ -0.57
SS18-212ENST00000579061 DCUN1D5Q9BTE7 237 aa11.49□□□□□ -0.57
SS18-212ENST00000579061 SLC5A7Q9GZV3 580 aa11.49□□□□□ -0.57
SS18-212ENST00000579061 CCL28Q9NRJ3 127 aa11.49□□□□□ -0.57
SS18-212ENST00000579061 COMMD3Q9UBI1 195 aa11.49□□□□□ -0.57
SS18-212ENST00000579061 A0A0G2JLM5 398 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 MEIS3P1A6NDR6 274 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 SEC14L6B5MCN3 397 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 K7EIL1 84 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 RAMP3O60896 148 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 HSPB1P04792 205 aaKnown RBP11.48□□□□□ -0.57
SS18-212ENST00000579061 ALDH3B2P48448 385 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 INSL3P51460 131 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 BRWD1-AS2P59051 145 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 DGCR2P98153 550 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 DYRK1AQ13627 763 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 TNXAQ16473 311 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 MZT2AQ6P582 158 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 OR5T1Q8NG75 326 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 GPX8Q8TED1 209 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 SRSF12Q8WXF0 261 aaKnown RBP11.48□□□□□ -0.57
SS18-212ENST00000579061 MS4A10Q96PG2 267 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 AIFM2Q9BRQ8 373 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 NAA50Q9GZZ1 169 aaKnown RBP11.48□□□□□ -0.57
SS18-212ENST00000579061 ZNF430Q9H8G1 570 aaPredicted RBP11.48□□□□□ -0.57
SS18-212ENST00000579061 SCPEP1Q9HB40 452 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 TAS2R8Q9NYW2 309 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 EHFQ9NZC4 300 aa11.48□□□□□ -0.57
SS18-212ENST00000579061 SORL1Q92673 2214 aa11.47□□□□□ -0.57
SS18-212ENST00000579061 MSGN1A6NI15 193 aa11.47□□□□□ -0.57
SS18-212ENST00000579061 SULT1C2O00338 296 aa11.47□□□□□ -0.57
SS18-212ENST00000579061 RBFOX2O43251 390 aaKnown RBP eCLIP11.47□□□□□ -0.57
SS18-212ENST00000579061 ACTL6BO94805 426 aa11.47□□□□□ -0.57
SS18-212ENST00000579061 HRASP01112 189 aa11.47□□□□□ -0.57
SS18-212ENST00000579061 FCER2P06734 321 aa11.47□□□□□ -0.57
SS18-212ENST00000579061 HERV-K104P61576 105 aa11.47□□□□□ -0.57
SS18-212ENST00000579061 CATR1Q13166 79 aa11.47□□□□□ -0.57
SS18-212ENST00000579061 DCTN2Q13561 401 aaKnown RBP11.47□□□□□ -0.57
SS18-212ENST00000579061 OR2B11Q5JQS5 317 aa11.47□□□□□ -0.57
SS18-212ENST00000579061 IDO2Q6ZQW0 420 aa11.47□□□□□ -0.57
SS18-212ENST00000579061 PUSL1Q8N0Z8 303 aaKnown RBP11.47□□□□□ -0.57
SS18-212ENST00000579061 AP3S1Q92572 193 aa11.47□□□□□ -0.57
SS18-212ENST00000579061 PHB2Q99623 299 aa11.47□□□□□ -0.57
SS18-212ENST00000579061 SPIN2AQ99865 258 aa11.47□□□□□ -0.57
SS18-212ENST00000579061 SPIN2BQ9BPZ2 258 aa11.47□□□□□ -0.57
SS18-212ENST00000579061 TINAGL1Q9GZM7 467 aaPredicted RBP11.47□□□□□ -0.57
SS18-212ENST00000579061 ALX4Q9H161 411 aaPredicted RBP11.47□□□□□ -0.57
SS18-212ENST00000579061 ZNF355PQ9NSJ1 428 aa11.47□□□□□ -0.57
SS18-212ENST00000579061 IGHV4OR15-8A0A075B7B6 117 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 A0A087WW49 117 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 C13orf42A0A1B0GVH6 325 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 WI2-2373I1.2A0A1W2PRP0 233 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 OVOL1O14753 267 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 KBTBD11O94819 623 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 OR2A4O95047 310 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 IGHV3-11P01762 117 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 OR9G9P0C7N8 305 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 ZNF182P17025 639 aaPredicted RBP11.46□□□□□ -0.57
SS18-212ENST00000579061 ELK1P19419 428 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 MAS1LP35410 378 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 FXYD4P59646 89 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 GPR107Q5VW38 600 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 GPR141Q7Z602 305 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 OR5H2Q8NGV7 314 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 TMEM167AQ8TBQ9 72 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 DCUN1D4Q92564 292 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 MOB3AQ96BX8 217 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 USMG5Q96IX5 58 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 OR2A7Q96R45 310 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 SCOCQ9UIL1 159 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 ADAM30Q9UKF2 790 aa11.46□□□□□ -0.57
SS18-212ENST00000579061 TNFSF12O43508 249 aa11.45□□□□□ -0.58
SS18-212ENST00000579061 HPGDSO60760 199 aa11.45□□□□□ -0.58
SS18-212ENST00000579061 TPPPO94811 219 aa11.45□□□□□ -0.58
SS18-212ENST00000579061 GNRHRP30968 328 aa11.45□□□□□ -0.58
SS18-212ENST00000579061 RFX2P48378 723 aa11.45□□□□□ -0.58
SS18-212ENST00000579061 ZNF818PQ6ZRF7 136 aa11.45□□□□□ -0.58
SS18-212ENST00000579061 TMEM17Q86X19 198 aa11.45□□□□□ -0.58
SS18-212ENST00000579061 LYSMD2Q8IV50 215 aa11.45□□□□□ -0.58
SS18-212ENST00000579061 ADAD2Q8NCV1 583 aaKnown RBP11.45□□□□□ -0.58
SS18-212ENST00000579061 CD300LFQ8TDQ1 290 aa11.45□□□□□ -0.58
SS18-212ENST00000579061 DLX4Q92988 240 aaPredicted RBP11.45□□□□□ -0.58
SS18-212ENST00000579061 ZNF2Q9BSG1 426 aaPredicted RBP11.45□□□□□ -0.58
SS18-212ENST00000579061 RANGRFQ9HD47 186 aaPredicted RBP11.45□□□□□ -0.58
SS18-212ENST00000579061 COA4Q9NYJ1 87 aa11.45□□□□□ -0.58
SS18-212ENST00000579061 BET1LQ9NYM9 111 aa11.45□□□□□ -0.58
SS18-212ENST00000579061 MPPED1O15442 326 aa11.44□□□□□ -0.58
SS18-212ENST00000579061 HPRT1P00492 218 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms