RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 CDK10Q15131 360 aa17.7■□□□□ 0.42
VAPA-205ENST00000578314 ZNF66Q6ZN08 573 aa17.7■□□□□ 0.42
VAPA-205ENST00000578314 SNAPC3Q92966 411 aa17.7■□□□□ 0.42
VAPA-205ENST00000578314 SLC25A46Q96AG3 418 aa17.7■□□□□ 0.42
VAPA-205ENST00000578314 DCUN1D5Q9BTE7 237 aa17.7■□□□□ 0.42
VAPA-205ENST00000578314 TNXAQ16473 311 aa17.69■□□□□ 0.42
VAPA-205ENST00000578314 SAMD12Q8N8I0 201 aa17.69■□□□□ 0.42
VAPA-205ENST00000578314 OR5AP2Q8NGF4 316 aa17.69■□□□□ 0.42
VAPA-205ENST00000578314 OR4S2Q8NH73 311 aa17.69■□□□□ 0.42
VAPA-205ENST00000578314 TCTEX1D2Q8WW35 142 aa17.69■□□□□ 0.42
VAPA-205ENST00000578314 GIMAP1Q8WWP7 306 aa17.69■□□□□ 0.42
VAPA-205ENST00000578314 SRSF12Q8WXF0 261 aaKnown RBP17.69■□□□□ 0.42
VAPA-205ENST00000578314 KCTD12Q96CX2 325 aaKnown RBP17.69■□□□□ 0.42
VAPA-205ENST00000578314 B9D2Q9BPU9 175 aa17.69■□□□□ 0.42
VAPA-205ENST00000578314 FUNDC2Q9BWH2 189 aa17.69■□□□□ 0.42
VAPA-205ENST00000578314 TINAGL1Q9GZM7 467 aaPredicted RBP17.69■□□□□ 0.42
VAPA-205ENST00000578314 ZNF430Q9H8G1 570 aaPredicted RBP17.69■□□□□ 0.42
VAPA-205ENST00000578314 CCL28Q9NRJ3 127 aa17.69■□□□□ 0.42
VAPA-205ENST00000578314 LSM4Q9Y4Z0 139 aaKnown RBP17.69■□□□□ 0.42
VAPA-205ENST00000578314 C13orf42A0A1B0GVH6 325 aa17.68■□□□□ 0.42
VAPA-205ENST00000578314 CREBL2O60519 120 aaPredicted RBP17.68■□□□□ 0.42
VAPA-205ENST00000578314 PPYP01298 95 aa17.68■□□□□ 0.42
VAPA-205ENST00000578314 OR2B11Q5JQS5 317 aa17.68■□□□□ 0.42
VAPA-205ENST00000578314 MMD2Q8IY49 270 aa17.68■□□□□ 0.42
VAPA-205ENST00000578314 ZBTB34Q8NCN2 500 aa17.68■□□□□ 0.42
VAPA-205ENST00000578314 OR13F1Q8NGS4 319 aa17.68■□□□□ 0.42
VAPA-205ENST00000578314 SECTM1Q8WVN6 248 aa17.68■□□□□ 0.42
VAPA-205ENST00000578314 TAS2R8Q9NYW2 309 aa17.68■□□□□ 0.42
VAPA-205ENST00000578314 ANAPC10Q9UM13 185 aa17.68■□□□□ 0.42
VAPA-205ENST00000578314 TMEM69Q5SWH9 247 aa17.67■□□□□ 0.42
VAPA-205ENST00000578314 ACSM6Q6P461 480 aa17.67■□□□□ 0.42
VAPA-205ENST00000578314 ADAD2Q8NCV1 583 aaKnown RBP17.67■□□□□ 0.42
VAPA-205ENST00000578314 ACOT12Q8WYK0 555 aa17.67■□□□□ 0.42
VAPA-205ENST00000578314 PRR25Q96S07 402 aa17.67■□□□□ 0.42
VAPA-205ENST00000578314 PHB2Q99623 299 aa17.67■□□□□ 0.42
VAPA-205ENST00000578314 RANGRFQ9HD47 186 aaPredicted RBP17.67■□□□□ 0.42
VAPA-205ENST00000578314 ZNF256Q9Y2P7 627 aaPredicted RBP17.67■□□□□ 0.42
VAPA-205ENST00000578314 OR2A4O95047 310 aa17.66■□□□□ 0.42
VAPA-205ENST00000578314 FCER2P06734 321 aa17.66■□□□□ 0.42
VAPA-205ENST00000578314 TAS2R20P59543 309 aa17.66■□□□□ 0.42
VAPA-205ENST00000578314 NCS1P62166 190 aa17.66■□□□□ 0.42
VAPA-205ENST00000578314 VAX1Q5SQQ9 334 aa17.66■□□□□ 0.42
VAPA-205ENST00000578314 VKORC1L1Q8N0U8 176 aa17.66■□□□□ 0.42
VAPA-205ENST00000578314 PUSL1Q8N0Z8 303 aaKnown RBP17.66■□□□□ 0.42
VAPA-205ENST00000578314 VSTM2AQ8TAG5 236 aa17.66■□□□□ 0.42
VAPA-205ENST00000578314 USMG5Q96IX5 58 aa17.66■□□□□ 0.42
VAPA-205ENST00000578314 OR2A7Q96R45 310 aa17.66■□□□□ 0.42
VAPA-205ENST00000578314 MEIS3P1A6NDR6 274 aa17.65■□□□□ 0.42
VAPA-205ENST00000578314 SAP30O75446 220 aa17.65■□□□□ 0.42
VAPA-205ENST00000578314 ACTL6BO94805 426 aa17.65■□□□□ 0.42
VAPA-205ENST00000578314 OR9G9P0C7N8 305 aa17.65■□□□□ 0.42
VAPA-205ENST00000578314 APELAP0DMC3 54 aa17.65■□□□□ 0.42
VAPA-205ENST00000578314 KIR2DS2P43631 304 aa17.65■□□□□ 0.42
VAPA-205ENST00000578314 DHRS11Q6UWP2 260 aa17.65■□□□□ 0.42
VAPA-205ENST00000578314 TMEM167AQ8TBQ9 72 aa17.65■□□□□ 0.42
VAPA-205ENST00000578314 CMTM3Q96MX0 182 aa17.65■□□□□ 0.42
VAPA-205ENST00000578314 GPHA2Q96T91 129 aa17.65■□□□□ 0.42
VAPA-205ENST00000578314 SPIN2AQ99865 258 aa17.65■□□□□ 0.42
VAPA-205ENST00000578314 SPIN2BQ9BPZ2 258 aa17.65■□□□□ 0.42
VAPA-205ENST00000578314 SLC5A7Q9GZV3 580 aa17.65■□□□□ 0.42
VAPA-205ENST00000578314 IFT46Q9NQC8 304 aa17.65■□□□□ 0.42
VAPA-205ENST00000578314 COA4Q9NYJ1 87 aa17.65■□□□□ 0.42
VAPA-205ENST00000578314 TNCP24821 2201 aa17.64■□□□□ 0.42
VAPA-205ENST00000578314 NAT1P18440 290 aa17.64■□□□□ 0.41
VAPA-205ENST00000578314 ZP3P21754 424 aa17.64■□□□□ 0.41
VAPA-205ENST00000578314 VBP1P61758 197 aa17.64■□□□□ 0.41
VAPA-205ENST00000578314 CD69Q07108 199 aa17.64■□□□□ 0.41
VAPA-205ENST00000578314 DYRK1AQ13627 763 aa17.64■□□□□ 0.41
VAPA-205ENST00000578314 ZNF343Q6P1L6 599 aa17.64■□□□□ 0.41
VAPA-205ENST00000578314 TTC9CQ8N5M4 171 aa17.64■□□□□ 0.41
VAPA-205ENST00000578314 RBFOX2O43251 390 aaKnown RBP eCLIP17.63■□□□□ 0.41
VAPA-205ENST00000578314 TNFSF12O43508 249 aa17.63■□□□□ 0.41
VAPA-205ENST00000578314 RBMXL2O75526 392 aaKnown RBP17.63■□□□□ 0.41
VAPA-205ENST00000578314 KBTBD11O94819 623 aa17.63■□□□□ 0.41
VAPA-205ENST00000578314 HRASP01112 189 aa17.63■□□□□ 0.41
VAPA-205ENST00000578314 PRSS3P35030 304 aa17.63■□□□□ 0.41
VAPA-205ENST00000578314 C11orf87Q6NUJ2 197 aa17.63■□□□□ 0.41
VAPA-205ENST00000578314 ANKRD34BA5PLL1 514 aa17.62■□□□□ 0.41
VAPA-205ENST00000578314 MPPED1O15442 326 aa17.62■□□□□ 0.41
VAPA-205ENST00000578314 APOA1P02647 267 aa17.62■□□□□ 0.41
VAPA-205ENST00000578314 EIF4EP06730 217 aaKnown RBP17.62■□□□□ 0.41
VAPA-205ENST00000578314 MAS1LP35410 378 aa17.62■□□□□ 0.41
VAPA-205ENST00000578314 FXYD4P59646 89 aa17.62■□□□□ 0.41
VAPA-205ENST00000578314 KLF5Q13887 457 aaPredicted RBP17.62■□□□□ 0.41
VAPA-205ENST00000578314 C10orf55Q5SWW7 151 aa17.62■□□□□ 0.41
VAPA-205ENST00000578314 ZNF818PQ6ZRF7 136 aa17.62■□□□□ 0.41
VAPA-205ENST00000578314 SPAG16Q8N0X2 631 aa17.62■□□□□ 0.41
VAPA-205ENST00000578314 AIFM2Q9BRQ8 373 aa17.62■□□□□ 0.41
VAPA-205ENST00000578314 COMMD3Q9UBI1 195 aa17.62■□□□□ 0.41
VAPA-205ENST00000578314 PEF1Q9UBV8 284 aaKnown RBP17.62■□□□□ 0.41
VAPA-205ENST00000578314 TRBV9A0A0B4J1U6 114 aa17.61■□□□□ 0.41
VAPA-205ENST00000578314 SMIM18P0DKX4 95 aa17.61■□□□□ 0.41
VAPA-205ENST00000578314 RFX2P48378 723 aa17.61■□□□□ 0.41
VAPA-205ENST00000578314 DEFA5Q01523 94 aa17.61■□□□□ 0.41
VAPA-205ENST00000578314 OR4C12Q96R67 309 aa17.61■□□□□ 0.41
VAPA-205ENST00000578314 EHFQ9NZC4 300 aa17.61■□□□□ 0.41
VAPA-205ENST00000578314 TEX22C9J3V5 150 aa17.6■□□□□ 0.41
VAPA-205ENST00000578314 IL6RP08887 468 aaPredicted RBP17.6■□□□□ 0.41
VAPA-205ENST00000578314 GNRHRP30968 328 aa17.6■□□□□ 0.41
VAPA-205ENST00000578314 TAS2R46P59540 309 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms