RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 SPIN2AQ99865 258 aa10.59□□□□□ -0.71
CTC1-203ENST00000578240 SPIN2BQ9BPZ2 258 aa10.59□□□□□ -0.71
CTC1-203ENST00000578240 ACANP16112 2415 aa10.59□□□□□ -0.71
CTC1-203ENST00000578240 TRAV3A0A0B4J244 114 aa10.58□□□□□ -0.72
CTC1-203ENST00000578240 A0A1B0GU03 582 aa10.58□□□□□ -0.72
CTC1-203ENST00000578240 RNF223E7ERA6 249 aa10.58□□□□□ -0.72
CTC1-203ENST00000578240 DEDDO75618 318 aa10.58□□□□□ -0.72
CTC1-203ENST00000578240 ID3Q02535 119 aa10.58□□□□□ -0.72
CTC1-203ENST00000578240 FGL1Q08830 312 aa10.58□□□□□ -0.72
CTC1-203ENST00000578240 TPTE2P1Q5T6R2 138 aa10.58□□□□□ -0.72
CTC1-203ENST00000578240 TMEM65Q6PI78 240 aa10.58□□□□□ -0.72
CTC1-203ENST00000578240 FOXRED2Q8IWF2 684 aa10.58□□□□□ -0.72
CTC1-203ENST00000578240 CFHR4Q92496 578 aa10.58□□□□□ -0.72
CTC1-203ENST00000578240 HEXA-AS1Q9H8Q6 139 aa10.58□□□□□ -0.72
CTC1-203ENST00000578240 COA4Q9NYJ1 87 aa10.58□□□□□ -0.72
CTC1-203ENST00000578240 AMMECR1Q9Y4X0 333 aaPredicted RBP10.58□□□□□ -0.72
CTC1-203ENST00000578240 LSM5Q9Y4Y9 91 aaKnown RBP10.58□□□□□ -0.72
CTC1-203ENST00000578240 HSPB11Q9Y547 144 aa10.58□□□□□ -0.72
CTC1-203ENST00000578240 POMT1Q9Y6A1 747 aa10.58□□□□□ -0.72
CTC1-203ENST00000578240 IGHV3-72A0A0B4J1Y9 119 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 TMEM50AO95807 157 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 IL6RP08887 468 aaPredicted RBP10.57□□□□□ -0.72
CTC1-203ENST00000578240 IL3RAP26951 378 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 LOXL1Q08397 574 aaPredicted RBP10.57□□□□□ -0.72
CTC1-203ENST00000578240 AARDQ4LEZ3 155 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 TMEM177Q53S58 311 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 DHRS7BQ6IAN0 325 aaPredicted RBP10.57□□□□□ -0.72
CTC1-203ENST00000578240 SSX9Q7RTT3 188 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 RNASE11Q8TAA1 199 aaKnown RBP10.57□□□□□ -0.72
CTC1-203ENST00000578240 LHX4Q969G2 390 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 RITA1Q96K30 269 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 Q96MF0 132 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 TMEM140Q9NV12 185 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 IGLV2-23P01705 113 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 NQO2P16083 231 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 HTR1DP28221 377 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 NKX2-1P43699 371 aaPredicted RBP10.57□□□□□ -0.72
CTC1-203ENST00000578240 RIPPLY3P57055 190 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 POLR2GP62487 172 aaKnown RBP eCLIP10.57□□□□□ -0.72
CTC1-203ENST00000578240 RELBQ01201 579 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 IFITM2Q01629 132 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 HABP2Q14520 560 aaPredicted RBP10.57□□□□□ -0.72
CTC1-203ENST00000578240 THOC7Q6I9Y2 204 aaKnown RBP10.57□□□□□ -0.72
CTC1-203ENST00000578240 PRSS57Q6UWY2 283 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 ZNF546Q86UE3 836 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 PDPNQ86YL7 162 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 DCUN1D4Q92564 292 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 RHOVQ96L33 236 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 MAGT1Q9H0U3 335 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 NSG2Q9Y328 171 aa10.57□□□□□ -0.72
CTC1-203ENST00000578240 PIGBOS1A0A0B4J2F0 54 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 CENPVL3A0A0U1RRI6 287 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 B4DSR2 109 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 AVPP01185 164 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 APOA2P02652 100 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 SAA1P0DJI8 122 aaPredicted RBP10.56□□□□□ -0.72
CTC1-203ENST00000578240 PAX9P55771 341 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 OR2B8PP59922 312 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 RTL8BQ17RB0 113 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 MRGPRG-AS1Q2M3A8 158 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 OR4A47Q6IF82 309 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 PIP4P2Q8N4L2 257 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 WFDC11Q8NEX6 87 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 THAP6Q8TBB0 222 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 RPEQ96AT9 228 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 REG4Q9BYZ8 158 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 DPM3Q9P2X0 92 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 WASHC3Q9Y3C0 194 aa10.56□□□□□ -0.72
CTC1-203ENST00000578240 LEUTXA8MZ59 168 aa10.55□□□□□ -0.72
CTC1-203ENST00000578240 H7C2Y5 167 aa10.55□□□□□ -0.72
CTC1-203ENST00000578240 TIMM23O14925 209 aa10.55□□□□□ -0.72
CTC1-203ENST00000578240 ST8SIA3O43173 380 aa10.55□□□□□ -0.72
CTC1-203ENST00000578240 TXNL1O43396 289 aa10.55□□□□□ -0.72
CTC1-203ENST00000578240 SSSCA1O60232 199 aa10.55□□□□□ -0.72
CTC1-203ENST00000578240 GAPDHP04406 335 aaKnown RBP10.55□□□□□ -0.72
CTC1-203ENST00000578240 UBE2E1P51965 193 aa10.55□□□□□ -0.72
CTC1-203ENST00000578240 ZNF345Q14585 488 aa10.55□□□□□ -0.72
CTC1-203ENST00000578240 H2BFWTQ7Z2G1 175 aa10.55□□□□□ -0.72
CTC1-203ENST00000578240 PUSL1Q8N0Z8 303 aaKnown RBP10.55□□□□□ -0.72
CTC1-203ENST00000578240 OSR1Q8TAX0 266 aaPredicted RBP10.55□□□□□ -0.72
CTC1-203ENST00000578240 HARBI1Q96MB7 349 aa10.55□□□□□ -0.72
CTC1-203ENST00000578240 QTRT1Q9BXR0 403 aaKnown RBP10.55□□□□□ -0.72
CTC1-203ENST00000578240 HSPB7Q9UBY9 170 aa10.55□□□□□ -0.72
CTC1-203ENST00000578240 HILPDAQ9Y5L2 63 aa10.55□□□□□ -0.72
CTC1-203ENST00000578240 TRAV40A0A0B4J280 105 aa10.54□□□□□ -0.72
CTC1-203ENST00000578240 FAM90A9PA6NNJ1 464 aa10.54□□□□□ -0.72
CTC1-203ENST00000578240 PET100P0DJ07 73 aa10.54□□□□□ -0.72
CTC1-203ENST00000578240 IGHV4-31P0DP07 118 aa10.54□□□□□ -0.72
CTC1-203ENST00000578240 RRASP10301 218 aa10.54□□□□□ -0.72
CTC1-203ENST00000578240 MYOD1P15172 320 aa10.54□□□□□ -0.72
CTC1-203ENST00000578240 CNTFRP26992 372 aa10.54□□□□□ -0.72
CTC1-203ENST00000578240 SAA4P35542 130 aa10.54□□□□□ -0.72
CTC1-203ENST00000578240 TAGLNQ01995 201 aaKnown RBP10.54□□□□□ -0.72
CTC1-203ENST00000578240 TNFRSF9Q07011 255 aa10.54□□□□□ -0.72
CTC1-203ENST00000578240 AQP10Q96PS8 301 aa10.54□□□□□ -0.72
CTC1-203ENST00000578240 MFFQ9GZY8 342 aa10.54□□□□□ -0.72
CTC1-203ENST00000578240 TPSG1Q9NRR2 321 aa10.54□□□□□ -0.72
CTC1-203ENST00000578240 HIF1ANQ9NWT6 349 aa10.54□□□□□ -0.72
CTC1-203ENST00000578240 SONP18583 2426 aaKnown RBP10.54□□□□□ -0.72
CTC1-203ENST00000578240 C15orf61A6NNL5 157 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms