RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 BUB1B-PAK6H3BSN5 160 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 EREGO14944 169 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 OR2A4O95047 310 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 CDS2O95674 445 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 CRYZL1O95825 349 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 SCGB1D2O95969 90 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 IFNA21P01568 189 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 HLA-GP17693 338 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 G6PCP35575 357 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 EIF2B2P49770 351 aaKnown RBP8.12□□□□□ -1.11
CRLF3-202ENST00000577725 RAP2BP61225 183 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 SRPXP78539 464 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 PAX8Q06710 450 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 IAH1Q2TAA2 248 aaPredicted RBP8.12□□□□□ -1.11
CRLF3-202ENST00000577725 ZFP69Q49AA0 526 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 LRRC37A5PQ49AS3 106 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 AWAT1Q58HT5 328 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 RUSC1-AS1Q66K80 236 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 SSX9Q7RTT3 188 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 ZBTB8BQ8NAP8 495 aaPredicted RBP8.12□□□□□ -1.11
CRLF3-202ENST00000577725 BEND2Q8NDZ0 799 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 OR2T35Q8NGX2 323 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 GRPEL2Q8TAA5 225 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 C17orf50Q8WW18 174 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 OR2A7Q96R45 310 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 NABP2Q9BQ15 211 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 HEXA-AS1Q9H8Q6 139 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 SLC35D1Q9NTN3 355 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
CRLF3-202ENST00000577725 H0YJW9 148 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 LY6LH3BQJ8 138 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 B3GALNT1O75752 331 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 KRASP01116 189 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 SRP14P37108 136 aaKnown RBP8.11□□□□□ -1.11
CRLF3-202ENST00000577725 KIR2DS2P43631 304 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 ZNF137PP52743 207 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 AKR1C2P52895 323 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 S100A10P60903 97 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 TM4SF20Q53R12 229 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 NMSQ5H8A3 153 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 TPTE2P1Q5T6R2 138 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 C1orf122Q6ZSJ8 110 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 MOB3BQ86TA1 216 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 THNSL2Q86YJ6 484 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 TGIF2LXQ8IUE1 241 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 FOXRED2Q8IWF2 684 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 VKORC1L1Q8N0U8 176 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 DYNAPQ8N1N2 210 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 LINC01356Q8N9X3 169 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 OR11H6Q8NGC7 330 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 OR11H4Q8NGC9 324 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 IL22RA2Q969J5 263 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 RPEQ96AT9 228 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 TMEM186Q96B77 213 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 R3HDM4Q96D70 268 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 ADTRPQ96IZ2 230 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 C2orf50Q96LR7 162 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 RANBP3Q9H6Z4 567 aaPredicted RBP8.11□□□□□ -1.11
CRLF3-202ENST00000577725 HIF1ANQ9NWT6 349 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 PRELID3BQ9Y3B1 194 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 AMMECR1Q9Y4X0 333 aaPredicted RBP8.11□□□□□ -1.11
CRLF3-202ENST00000577725 HILPDAQ9Y5L2 63 aa8.11□□□□□ -1.11
CRLF3-202ENST00000577725 EPPK1P58107 5090 aaKnown RBP8.1□□□□□ -1.11
CRLF3-202ENST00000577725 FXYD6-FXYD2A0A087WZ82 144 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 B4DSR2 109 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 H7C2Y5 167 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 APOA2P02652 100 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 C1QBP02746 253 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 HTR1DP28221 377 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 SRSF4Q08170 494 aaKnown RBP8.1□□□□□ -1.11
CRLF3-202ENST00000577725 RAB32Q13637 225 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 C11orf87Q6NUJ2 197 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 Q6ZRM9 215 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 NOXA1Q86UR1 476 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 OR4S2Q8NH73 311 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 PPP1R1CQ8WVI7 109 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 UNKLQ9H9P5 680 aaKnown RBP8.1□□□□□ -1.11
CRLF3-202ENST00000577725 DPM3Q9P2X0 92 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 CACNG5Q9UF02 275 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 NSG2Q9Y328 171 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 TMED3Q9Y3Q3 217 aa8.1□□□□□ -1.11
CRLF3-202ENST00000577725 LSM5Q9Y4Y9 91 aaKnown RBP8.1□□□□□ -1.11
CRLF3-202ENST00000577725 SOX21Q9Y651 276 aaPredicted RBP8.1□□□□□ -1.11
CRLF3-202ENST00000577725 TRAV3A0A0B4J244 114 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 TRAV20A0A0B4J274 112 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 TRAV40A0A0B4J280 105 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 IGHV1-3A0A0C4DH29 117 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 CENPVL3A0A0U1RRI6 287 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 DUXBA0A1W2PPF3 345 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 A0A1W2PPI3 338 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 LEUTXA8MZ59 168 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 H0YIZ8 118 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 HPRT1P00492 218 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 AVPP01185 164 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 GAPDHP04406 335 aaKnown RBP8.09□□□□□ -1.11
CRLF3-202ENST00000577725 IGKV1-16P04430 117 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 OR9G9P0C7N8 305 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 P0C879 139 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 IGHV4-38-2P0DP08 117 aa8.09□□□□□ -1.11
CRLF3-202ENST00000577725 VDAC1P21796 283 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms