RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 PLAUP00749 431 aa9.27□□□□□ -0.93
RNF43-203ENST00000577716 CD3EP07766 207 aa9.27□□□□□ -0.93
RNF43-203ENST00000577716 IGKV1-13P0DP09 117 aa9.27□□□□□ -0.93
RNF43-203ENST00000577716 CTSSP25774 331 aa9.27□□□□□ -0.93
RNF43-203ENST00000577716 C1orf174Q8IYL3 243 aa9.27□□□□□ -0.93
RNF43-203ENST00000577716 SIGLEC12Q96PQ1 595 aa9.27□□□□□ -0.93
RNF43-203ENST00000577716 MS4A5Q9H3V2 200 aa9.27□□□□□ -0.93
RNF43-203ENST00000577716 AMMECR1Q9Y4X0 333 aaPredicted RBP9.27□□□□□ -0.93
RNF43-203ENST00000577716 NOTCH4Q99466 2003 aa9.27□□□□□ -0.93
RNF43-203ENST00000577716 PRR33A8MZF0 331 aa9.27□□□□□ -0.93
RNF43-203ENST00000577716 C12orf77C9JDV5 145 aa9.27□□□□□ -0.93
RNF43-203ENST00000577716 C16orf97H3BN30 126 aa9.27□□□□□ -0.93
RNF43-203ENST00000577716 IBA57Q5T440 356 aaKnown RBP9.27□□□□□ -0.93
RNF43-203ENST00000577716 LHFPL1Q86WI0 220 aa9.27□□□□□ -0.93
RNF43-203ENST00000577716 RASL11BQ9BPW5 248 aa9.27□□□□□ -0.93
RNF43-203ENST00000577716 GSN-AS1Q9NRJ2 163 aa9.27□□□□□ -0.93
RNF43-203ENST00000577716 CEACAM18A8MTB9 384 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 HOXB1P14653 301 aaPredicted RBP9.26□□□□□ -0.93
RNF43-203ENST00000577716 LRRK1Q38SD2 2015 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 GCSAMQ8N6F7 178 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 TMEM45BQ96B21 275 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 QTRT1Q9BXR0 403 aaKnown RBP9.26□□□□□ -0.93
RNF43-203ENST00000577716 TUBA4BQ9H853 241 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 COL4A6Q14031 1691 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 PPIAL4EA0A075B759 164 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 PPIAL4DF5H284 164 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 RPLP1P05386 114 aaKnown RBP9.26□□□□□ -0.93
RNF43-203ENST00000577716 PPIAL4FP0DN26 164 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 ACP1P24666 158 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 ATP1A1-AS1Q5TC04 95 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 C19orf35Q6ZS72 473 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 CYP2G1PQ6ZSU1 146 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 C5orf17Q8NAS9 161 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 PPIAL4AQ9Y536 164 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 TMEM56-RWDD3S4R434 201 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 FHL1Q13642 323 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 LRRC75BQ2VPJ9 315 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 KIAA1644Q3SXP7 199 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 STPG1Q5TH74 334 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 FAM222BQ8WU58 562 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 RAB1CQ92928 201 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 MRPL18Q9H0U6 180 aaKnown RBP9.26□□□□□ -0.93
RNF43-203ENST00000577716 ZNF703Q9H7S9 590 aaPredicted RBP9.26□□□□□ -0.93
RNF43-203ENST00000577716 IGLV3-32A0A0A0MS00 114 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 TRBV6-7A0A0A0MS04 114 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 J3QR89 54 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 UMODP07911 640 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 CRYBB3P26998 211 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 PLAURQ03405 335 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 GTF2H5Q6ZYL4 71 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 ZDHHC16Q969W1 377 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 ELOVL1Q9BW60 279 aa9.26□□□□□ -0.93
RNF43-203ENST00000577716 CACNA1BQ00975 2339 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 IGHV3-72A0A0B4J1Y9 119 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 GRIFINA4D1Z8 144 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 LINC00587B1AMM8 73 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 RPL8P62917 257 aaKnown RBP9.25□□□□□ -0.93
RNF43-203ENST00000577716 RNF144BQ7Z419 303 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 Q8WTZ3 238 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 FAM117AQ9C073 453 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 JPT1Q9UK76 154 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 AHRRA9YTQ3 701 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 FXYD3Q14802 87 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 RTP5Q14D33 572 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 WBP1Q96G27 269 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 CYTL1Q9NRR1 136 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 A8MWL6 223 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 HYPMO75409 117 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 CD82P27701 267 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 RPL27AP46776 148 aaKnown RBP9.25□□□□□ -0.93
RNF43-203ENST00000577716 SELENOTP62341 195 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 RIGQ13278 110 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 SLC35E4Q6ICL7 350 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 CLDND2Q8NHS1 167 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 SPSB4Q96A44 273 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 C18orf12Q96KH6 178 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 ANAPC1Q9H1A4 1944 aa9.25□□□□□ -0.93
RNF43-203ENST00000577716 PRR19A6NJB7 356 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 J3QW42 95 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 HLA-DQA1P01909 254 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 MMDQ15546 238 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 HCP5Q6MZN7 132 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 ZNF525Q8N782 197 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 VOPP1Q96AW1 172 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 ZNF714Q96N38 554 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 DOCK10Q96BY6 2186 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 TMSB15BA0A087X1C1 80 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 IGKV1-12A0A0C4DH73 117 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 C17orf98A8MV24 154 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 IGKV1D-12P01611 117 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 OR4A8P0C604 315 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 HOXA5P20719 270 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 CCL20P78556 96 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 NRN1LQ496H8 165 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 TMEM183AQ8IXX5 376 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 ZNRF1Q8ND25 227 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 MAP1LC3CQ9BXW4 147 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 NPCDR1Q9BY65 106 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 PRSS1P07477 247 aa9.24□□□□□ -0.93
RNF43-203ENST00000577716 CD99P14209 185 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms