RNA–Protein interactions for RNA: ENST00000576894.5

SRRM2-229, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 2,210 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-229ENST00000576894 OPN1MW3P0DN78 364 aa17.11■□□□□ 0.33
SRRM2-229ENST00000576894 CDX1P47902 265 aaPredicted RBP17.11■□□□□ 0.33
SRRM2-229ENST00000576894 PRAMEF5Q5TYX0 476 aa17.11■□□□□ 0.33
SRRM2-229ENST00000576894 RPRMLQ8N4K4 120 aa17.11■□□□□ 0.33
SRRM2-229ENST00000576894 PLPPR2Q96GM1 343 aa17.11■□□□□ 0.33
SRRM2-229ENST00000576894 GGACTQ9BVM4 153 aa17.11■□□□□ 0.33
SRRM2-229ENST00000576894 CALYQ9NYX4 217 aa17.11■□□□□ 0.33
SRRM2-229ENST00000576894 DIDO1Q9BTC0 2240 aaKnown RBP17.1■□□□□ 0.33
SRRM2-229ENST00000576894 KIR2DS2P43631 304 aa17.1■□□□□ 0.33
SRRM2-229ENST00000576894 GATA4P43694 442 aa17.1■□□□□ 0.33
SRRM2-229ENST00000576894 RPP30P78346 268 aaKnown RBP17.1■□□□□ 0.33
SRRM2-229ENST00000576894 ACOT6Q3I5F7 207 aaPredicted RBP17.1■□□□□ 0.33
SRRM2-229ENST00000576894 RPL39P5Q59GN2 51 aa17.1■□□□□ 0.33
SRRM2-229ENST00000576894 Q6ZS92 163 aa17.1■□□□□ 0.33
SRRM2-229ENST00000576894 OR4A16Q8NH70 328 aa17.1■□□□□ 0.33
SRRM2-229ENST00000576894 FAM222BQ8WU58 562 aa17.1■□□□□ 0.33
SRRM2-229ENST00000576894 ITLN1Q8WWA0 313 aa17.1■□□□□ 0.33
SRRM2-229ENST00000576894 IFITM10A6NMD0 228 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 HIST1H2BKO60814 126 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 TRGC2P03986 189 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 HIST1H2BJP06899 126 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 HIST1H2BOP23527 126 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 CD1BP29016 333 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 HIST1H2BBP33778 126 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 VDAC2P45880 294 aaPredicted RBP17.09■□□□□ 0.33
SRRM2-229ENST00000576894 NDUFA6P56556 154 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 HIST1H2BDP58876 126 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 HIST1H2BCP62807 126 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 HIST2H2BEQ16778 126 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.09■□□□□ 0.33
SRRM2-229ENST00000576894 C1orf185Q5T7R7 199 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 DDB2Q92466 427 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 HIST1H2BHQ93079 126 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 HIST1H2BNQ99877 126 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 HIST1H2BMQ99879 126 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 ZNF292O60281 2723 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 AKAP13Q12802 2813 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 SEC14L6B5MCN3 397 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 SPRY3O43610 288 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 SOX15O60248 233 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 TIMP3P35625 211 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 EDDM3BP56851 147 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 TLE1Q04724 770 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 S1PR3Q99500 378 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 SSX3Q99909 188 aa17.09■□□□□ 0.33
SRRM2-229ENST00000576894 ERVK-16P61578 105 aa17.08■□□□□ 0.33
SRRM2-229ENST00000576894 RELBQ01201 579 aa17.08■□□□□ 0.33
SRRM2-229ENST00000576894 C17orf58Q2M2W7 97 aa17.08■□□□□ 0.33
SRRM2-229ENST00000576894 TMEM249Q2WGJ8 235 aa17.08■□□□□ 0.33
SRRM2-229ENST00000576894 SSX9Q7RTT3 188 aa17.08■□□□□ 0.33
SRRM2-229ENST00000576894 GATAD1Q8WUU5 269 aa17.08■□□□□ 0.33
SRRM2-229ENST00000576894 RAB7AP51149 207 aa17.08■□□□□ 0.32
SRRM2-229ENST00000576894 BSNQ9UPA5 3926 aa17.07■□□□□ 0.32
SRRM2-229ENST00000576894 SLC31A2O15432 143 aa17.07■□□□□ 0.32
SRRM2-229ENST00000576894 CDC34P49427 236 aaPredicted RBP17.07■□□□□ 0.32
SRRM2-229ENST00000576894 TMPRSS3P57727 454 aa17.07■□□□□ 0.32
SRRM2-229ENST00000576894 RPL23P62829 140 aaKnown RBP17.07■□□□□ 0.32
SRRM2-229ENST00000576894 ADIRFQ15847 76 aa17.07■□□□□ 0.32
SRRM2-229ENST00000576894 C1orf229Q6ZS94 237 aaPredicted RBP17.07■□□□□ 0.32
SRRM2-229ENST00000576894 RPUSD4Q96CM3 377 aaKnown RBP17.07■□□□□ 0.32
SRRM2-229ENST00000576894 PARLQ9H300 379 aa17.07■□□□□ 0.32
SRRM2-229ENST00000576894 RAB9BQ9NP90 201 aa17.07■□□□□ 0.32
SRRM2-229ENST00000576894 GFOD1Q9NXC2 390 aa17.07■□□□□ 0.32
SRRM2-229ENST00000576894 HEATR1Q9H583 2144 aaKnown RBP17.07■□□□□ 0.32
SRRM2-229ENST00000576894 PRSS46E5RG02 174 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 PHOX2AO14813 284 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 MPDU1O75352 247 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 BSXQ3C1V8 233 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 VHLLQ6RSH7 139 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.06■□□□□ 0.32
SRRM2-229ENST00000576894 OR4F5Q8NH21 305 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 SDSLQ96GA7 329 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 OR4F4Q96R69 305 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 FAM234AQ9H0X4 552 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 ZNF318Q5VUA4 2279 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 SMCO3A2RU48 225 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 IFNA10P01566 189 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 RD3LP0DJH9 198 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 SPNS3Q6ZMD2 512 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 ABHD5Q8WTS1 349 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 RAB1CQ92928 201 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 TMEM140Q9NV12 185 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 DMRT1Q9Y5R6 373 aa17.06■□□□□ 0.32
SRRM2-229ENST00000576894 GFRA3O60609 400 aa17.05■□□□□ 0.32
SRRM2-229ENST00000576894 PAGE4O60829 102 aa17.05■□□□□ 0.32
SRRM2-229ENST00000576894 IGHV3-7P01780 117 aa17.05■□□□□ 0.32
SRRM2-229ENST00000576894 PFN1P07737 140 aaKnown RBP17.05■□□□□ 0.32
SRRM2-229ENST00000576894 CT45A1Q5HYN5 189 aa17.05■□□□□ 0.32
SRRM2-229ENST00000576894 PYY3Q5JQD4 70 aa17.05■□□□□ 0.32
SRRM2-229ENST00000576894 UTF1Q5T230 341 aa17.05■□□□□ 0.32
SRRM2-229ENST00000576894 VKORC1L1Q8N0U8 176 aa17.05■□□□□ 0.32
SRRM2-229ENST00000576894 OR4S2Q8NH73 311 aa17.05■□□□□ 0.32
SRRM2-229ENST00000576894 CT45A3Q8NHU0 189 aa17.05■□□□□ 0.32
SRRM2-229ENST00000576894 NEIL1Q96FI4 390 aaPredicted RBP17.05■□□□□ 0.32
SRRM2-229ENST00000576894 PYGO2Q9BRQ0 406 aa17.05■□□□□ 0.32
SRRM2-229ENST00000576894 SFXN3Q9BWM7 321 aa17.05■□□□□ 0.32
SRRM2-229ENST00000576894 HEYLQ9NQ87 328 aaPredicted RBP17.05■□□□□ 0.32
SRRM2-229ENST00000576894 RNF7Q9UBF6 113 aa17.05■□□□□ 0.32
SRRM2-229ENST00000576894 CADP27708 2225 aa17.05■□□□□ 0.32
SRRM2-229ENST00000576894 TRAV3A0A0B4J244 114 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms