RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 PARD6GQ9BYG4 376 aaPredicted RBP19.44■□□□□ 0.7
NPLOC4-217ENST00000574897 DCHS2Q6V1P9 2916 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 ZFP92A6NM28 416 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 RBFOX2O43251 390 aaKnown RBP eCLIP19.43■□□□□ 0.71e-8■■■□□ 19
NPLOC4-217ENST00000574897 HBE1P02100 147 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 NQO2P16083 231 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 CCL3L1P16619 93 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 FGF7P21781 194 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 GRNP28799 593 aaKnown RBP19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 SERF2P84101 59 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 ZNF506Q5JVG8 444 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 ISOC2Q96AB3 205 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 DIRC2Q96SL1 478 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 CHD8Q9HCK8 2581 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 TMEM178BH3BS89 294 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 ITGB1BP1O14713 200 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 HMGB3O15347 200 aaKnown RBP19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 PLAUP00749 431 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 ERVK-16P61578 105 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 TMEM41BQ5BJD5 291 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 HIPK2Q9H2X6 1198 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 TPRP12270 2363 aaKnown RBP19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 ABCA4P78363 2273 aa19.43■□□□□ 0.7
NPLOC4-217ENST00000574897 COL6A6A6NMZ7 2263 aa19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 NKX6-3A6NJ46 265 aa19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 COLCA2A8K830 154 aa19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 NCMAPQ5T1S8 102 aa19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 RPP25LQ8N5L8 163 aaKnown RBP19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 LINC01560Q8TB33 94 aa19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 FAM216AQ8WUB2 273 aa19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 CORO2AQ92828 525 aa19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 RPUSD1Q9UJJ7 312 aaKnown RBP19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 TRAV1-1A0A0B4J248 108 aa19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 TRAV38-1A0A0B4J264 116 aa19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 FAM90A27PA6NNH2 459 aa19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 H7C2Y5 167 aa19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 DEFA4P12838 97 aa19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 MYOD1P15172 320 aa19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 OR4S2Q8NH73 311 aa19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 ZCCHC14Q8WYQ9 949 aaKnown RBP19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 SMCO4Q9NRQ5 59 aa19.42■□□□□ 0.7
NPLOC4-217ENST00000574897 PPIAL4EA0A075B759 164 aa19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 PPIAL4DF5H284 164 aa19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 PPIAL4FP0DN26 164 aa19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 AARDQ4LEZ3 155 aa19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 MBD3L1Q8WWY6 194 aa19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 PINX1Q96BK5 328 aaKnown RBP19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 RAB9BQ9NP90 201 aa19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 GAB2Q9UQC2 676 aa19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 PPIAL4AQ9Y536 164 aa19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 LOC102723971A0A1B0GUV8 181 aa19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 RHOVQ96L33 236 aa19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 EGLN1Q9GZT9 426 aa19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 SMDT1Q9H4I9 107 aa19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 LINC00574Q9H8X3 128 aa19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 DYNLRB1Q9NP97 96 aa19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 TMEM106BQ9NUM4 274 aa19.41■□□□□ 0.7
NPLOC4-217ENST00000574897 ANKHD1Q8IWZ3 2542 aaKnown RBP19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 hADV38S2A0JD32 116 aa19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 RRHO14718 337 aa19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 RPL31P62899 125 aaKnown RBP19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 ATP6V1FQ16864 119 aa19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 LINC00312Q9Y6C7 94 aa19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 NCOR2Q9Y618 2525 aa19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 MAP1LC3B2A6NCE7 125 aa19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 ARG1P05089 322 aa19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 CRYBA1P05813 215 aa19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 SPCS3P61009 180 aa19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 OR4A47Q6IF82 309 aa19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 ABHD12Q8N2K0 398 aa19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 MAP1LC3BQ9GZQ8 125 aa19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 SLC25A22Q9H936 323 aa19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 HEYLQ9NQ87 328 aaPredicted RBP19.4■□□□□ 0.7
NPLOC4-217ENST00000574897 IFNA10P01566 189 aa19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 VDAC2P45880 294 aaPredicted RBP19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 GNB2P62879 340 aa19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 SLC25A48Q6ZT89 311 aaKnown RBP19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 KDF1Q8NAX2 398 aaPredicted RBP19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 H1FXQ92522 213 aaKnown RBP19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 NPCDR1Q9BY65 106 aa19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 CTSZQ9UBR2 303 aa19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 A0A1W2PPE2 198 aa19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 FAM90A9PA6NNJ1 464 aa19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 HSPB1P04792 205 aaKnown RBP19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 KIR2DS2P43631 304 aa19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 THBS3P49746 956 aa19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 CENPVQ7Z7K6 275 aaPredicted RBP19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 TMEM170AQ8WVE7 144 aa19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 NGBQ9NPG2 151 aa19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 TCF19Q9Y242 345 aa19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 TIMM9Q9Y5J7 89 aa19.39■□□□□ 0.69
NPLOC4-217ENST00000574897 H3BQ15 152 aa19.38■□□□□ 0.69
NPLOC4-217ENST00000574897 CT45A6P0DMU7 189 aa19.38■□□□□ 0.69
NPLOC4-217ENST00000574897 CT45A5P0DMU8 189 aa19.38■□□□□ 0.69
NPLOC4-217ENST00000574897 CT45A7P0DMV0 189 aa19.38■□□□□ 0.69
NPLOC4-217ENST00000574897 CDSNQ15517 529 aa19.38■□□□□ 0.69
NPLOC4-217ENST00000574897 VWC2Q2TAL6 325 aa19.38■□□□□ 0.69
NPLOC4-217ENST00000574897 TMEM200BQ69YZ2 307 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms