RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 TMEM14EPQ6UXP3 125 aa23.19■■□□□ 1.3
CTDNEP1-210ENST00000574322 ATP5SQ99766 215 aa23.19■■□□□ 1.3
CTDNEP1-210ENST00000574322 PATZ1Q9HBE1 687 aaKnown RBP23.19■■□□□ 1.3
CTDNEP1-210ENST00000574322 H3BP45 60 aa23.18■■□□□ 1.3
CTDNEP1-210ENST00000574322 FBXO24O75426 580 aa23.18■■□□□ 1.3
CTDNEP1-210ENST00000574322 HRASP01112 189 aa23.18■■□□□ 1.3
CTDNEP1-210ENST00000574322 FGF2P09038 288 aa23.18■■□□□ 1.3
CTDNEP1-210ENST00000574322 RELBQ01201 579 aa23.18■■□□□ 1.3
CTDNEP1-210ENST00000574322 RTL8BQ17RB0 113 aa23.18■■□□□ 1.3
CTDNEP1-210ENST00000574322 TMEM140Q9NV12 185 aa23.18■■□□□ 1.3
CTDNEP1-210ENST00000574322 MALRD1Q5VYJ5 2156 aa23.17■■□□□ 1.3
CTDNEP1-210ENST00000574322 ZNF429Q86V71 674 aa23.17■■□□□ 1.3
CTDNEP1-210ENST00000574322 ABHD12Q8N2K0 398 aa23.17■■□□□ 1.3
CTDNEP1-210ENST00000574322 TMEM217Q8N7C4 229 aa23.17■■□□□ 1.3
CTDNEP1-210ENST00000574322 OR5AN1Q8NGI8 311 aa23.17■■□□□ 1.3
CTDNEP1-210ENST00000574322 RHOVQ96L33 236 aa23.17■■□□□ 1.3
CTDNEP1-210ENST00000574322 LRBAP50851 2863 aa23.17■■□□□ 1.3
CTDNEP1-210ENST00000574322 PPIAL4CA0A0B4J2A2 164 aa23.16■■□□□ 1.3
CTDNEP1-210ENST00000574322 IL6RP08887 468 aaPredicted RBP23.16■■□□□ 1.3
CTDNEP1-210ENST00000574322 PPIAL4GP0DN37 164 aa23.16■■□□□ 1.3
CTDNEP1-210ENST00000574322 EFNA4P52798 201 aa23.16■■□□□ 1.3
CTDNEP1-210ENST00000574322 OR10X1Q8NGY0 326 aa23.16■■□□□ 1.3
CTDNEP1-210ENST00000574322 OR4A16Q8NH70 328 aa23.16■■□□□ 1.3
CTDNEP1-210ENST00000574322 DTD1Q8TEA8 209 aa23.16■■□□□ 1.3
CTDNEP1-210ENST00000574322 QTRT1Q9BXR0 403 aaKnown RBP23.16■■□□□ 1.3
CTDNEP1-210ENST00000574322 SLC35D1Q9NTN3 355 aa23.16■■□□□ 1.3
CTDNEP1-210ENST00000574322 A8MXK9 166 aa23.16■■□□□ 1.3
CTDNEP1-210ENST00000574322 CDKN1AP38936 164 aa23.16■■□□□ 1.3
CTDNEP1-210ENST00000574322 SPCS3P61009 180 aa23.16■■□□□ 1.3
CTDNEP1-210ENST00000574322 TMEM267Q0VDI3 215 aaPredicted RBP23.16■■□□□ 1.3
CTDNEP1-210ENST00000574322 AIFM2Q9BRQ8 373 aa23.16■■□□□ 1.3
CTDNEP1-210ENST00000574322 ZNF705EA8MWA4 302 aaPredicted RBP23.15■■□□□ 1.3
CTDNEP1-210ENST00000574322 OVOL3O00110 214 aa23.15■■□□□ 1.3
CTDNEP1-210ENST00000574322 RBMXL2O75526 392 aaKnown RBP23.15■■□□□ 1.3
CTDNEP1-210ENST00000574322 HBG1P69891 147 aa23.15■■□□□ 1.3
CTDNEP1-210ENST00000574322 HBG2P69892 147 aa23.15■■□□□ 1.3
CTDNEP1-210ENST00000574322 SSX9Q7RTT3 188 aa23.15■■□□□ 1.3
CTDNEP1-210ENST00000574322 HAPLN4Q86UW8 402 aa23.15■■□□□ 1.3
CTDNEP1-210ENST00000574322 MRPL20Q9BYC9 149 aaKnown RBP23.15■■□□□ 1.3
CTDNEP1-210ENST00000574322 HECTD1Q9ULT8 2610 aa23.15■■□□□ 1.3
CTDNEP1-210ENST00000574322 NUDT19A8MXV4 375 aa23.14■■□□□ 1.3
CTDNEP1-210ENST00000574322 RAB5CP51148 216 aa23.14■■□□□ 1.3
CTDNEP1-210ENST00000574322 BLOC1S1P78537 153 aa23.14■■□□□ 1.3
CTDNEP1-210ENST00000574322 SPANXN5Q5MJ07 72 aa23.14■■□□□ 1.3
CTDNEP1-210ENST00000574322 VKORC1L1Q8N0U8 176 aa23.14■■□□□ 1.3
CTDNEP1-210ENST00000574322 PCGF1Q9BSM1 259 aa23.14■■□□□ 1.3
CTDNEP1-210ENST00000574322 METTL15P1P0C7V9 234 aa23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 TOR2AQ5JU69 321 aa23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 OR4A47Q6IF82 309 aa23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 HSD17B11Q8NBQ5 300 aa23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 OR13D1Q8NGV5 346 aa23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 OSR1Q8TAX0 266 aaPredicted RBP23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 H0YJW9 148 aa23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 IGLV1-47P01700 117 aa23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 APOA2P02652 100 aa23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 LIPFP07098 398 aa23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 ARL16Q0P5N6 197 aa23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 IGFBPL1Q8WX77 278 aa23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 GNPNAT1Q96EK6 184 aaPredicted RBP23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 TSNAXQ99598 290 aaKnown RBP23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 PARP11Q9NR21 331 aa23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 FOXA2Q9Y261 457 aaPredicted RBP23.13■■□□□ 1.29
CTDNEP1-210ENST00000574322 CRYBG3Q68DQ2 2970 aa23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 hCG_1809904A0A1W2PP81 198 aa23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 A0A1W2PPE2 198 aa23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 A0A1W2PR64 198 aa23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 A0A1W2PRV1 198 aa23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 C15orf61A6NNL5 157 aa23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 I3L521 148 aa23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 IL3RAP26951 378 aa23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 ATP6V0CP27449 155 aa23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 GPR6P46095 362 aaPredicted RBP23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 MARC2Q969Z3 335 aa23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 OR4C12Q96R67 309 aa23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 NABP2Q9BQ15 211 aa23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 PARD6GQ9BYG4 376 aaPredicted RBP23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 TMEM14BQ9NUH8 114 aa23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 STRAPQ9Y3F4 350 aaKnown RBP23.12■■□□□ 1.29
CTDNEP1-210ENST00000574322 DCHS2Q6V1P9 2916 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 IGHV2-26A0A0B4J1V2 119 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 RAB19A4D1S5 217 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 CEBPZOSA8MTT3 80 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 C22orf46C9J442 243 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 IGKV1-16P04430 117 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 PRRX1P54821 245 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 OR2B8PP59922 312 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 GNB2P62879 340 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 TMEM177Q53S58 311 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 ZNF525Q8N782 197 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 BEND2Q8NDZ0 799 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 ZDHHC16Q969W1 377 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 SH3BGRL3Q9H299 93 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 TRAV3A0A0B4J244 114 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 SCAF4O95104 1147 aaKnown RBP23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 LYPD6BQ8NI32 183 aa23.11■■□□□ 1.29
CTDNEP1-210ENST00000574322 PMS2P5A8MQ11 134 aa23.1■■□□□ 1.29
CTDNEP1-210ENST00000574322 IFNA17P01571 189 aa23.1■■□□□ 1.29
CTDNEP1-210ENST00000574322 PXDC1Q5TGL8 231 aa23.1■■□□□ 1.29
CTDNEP1-210ENST00000574322 PDPNQ86YL7 162 aa23.1■■□□□ 1.29
CTDNEP1-210ENST00000574322 SSBP3Q9BWW4 388 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms