RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 TINAGL1Q9GZM7 467 aaPredicted RBP12.74□□□□□ -0.37
TVP23B-207ENST00000574294 COL7A1Q02388 2944 aa12.74□□□□□ -0.37
TVP23B-207ENST00000574294 IGHV4OR15-8A0A075B7B6 117 aa12.73□□□□□ -0.37
TVP23B-207ENST00000574294 A0A087WW49 117 aa12.73□□□□□ -0.37
TVP23B-207ENST00000574294 IGHV3-11P01762 117 aa12.73□□□□□ -0.37
TVP23B-207ENST00000574294 NHLRC4P0CG21 123 aaPredicted RBP12.73□□□□□ -0.37
TVP23B-207ENST00000574294 TNXAQ16473 311 aa12.73□□□□□ -0.37
TVP23B-207ENST00000574294 UBE2NLQ5JXB2 153 aa12.73□□□□□ -0.37
TVP23B-207ENST00000574294 ACSM6Q6P461 480 aa12.73□□□□□ -0.37
TVP23B-207ENST00000574294 SRSF12Q8WXF0 261 aaKnown RBP12.73□□□□□ -0.37
TVP23B-207ENST00000574294 KCTD12Q96CX2 325 aaKnown RBP12.73□□□□□ -0.37
TVP23B-207ENST00000574294 YIPF6Q96EC8 236 aa12.73□□□□□ -0.37
TVP23B-207ENST00000574294 ELOVL1Q9BW60 279 aa12.73□□□□□ -0.37
TVP23B-207ENST00000574294 ALX4Q9H161 411 aaPredicted RBP12.73□□□□□ -0.37
TVP23B-207ENST00000574294 LSM4Q9Y4Z0 139 aaKnown RBP12.73□□□□□ -0.37
TVP23B-207ENST00000574294 IGKV1D-13A0A0B4J2D9 117 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 MSGN1A6NI15 193 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 J3QRK9 145 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 MPPED1O15442 326 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 SAP30O75446 220 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 HRASP01112 189 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 IGLV2-14P01704 120 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 SAA1P0DJI8 122 aaPredicted RBP12.72□□□□□ -0.37
TVP23B-207ENST00000574294 IGKV1-13P0DP09 117 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 FCGR2CP31995 323 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 MAS1LP35410 378 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 SLURP1P55000 103 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 FAM209BQ5JX69 171 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 VAX1Q5SQQ9 334 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 SLC25A42Q86VD7 318 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 OR5AP2Q8NGF4 316 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 OR6Q1Q8NGQ2 317 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 TCTEX1D2Q8WW35 142 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 ACOT12Q8WYK0 555 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 OR4C12Q96R67 309 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 COA4Q9NYJ1 87 aa12.72□□□□□ -0.37
TVP23B-207ENST00000574294 RBFOX2O43251 390 aaKnown RBP eCLIP12.71□□□□□ -0.37
TVP23B-207ENST00000574294 OR9G9P0C7N8 305 aa12.71□□□□□ -0.37
TVP23B-207ENST00000574294 RPS19P39019 145 aaKnown RBP12.71□□□□□ -0.37
TVP23B-207ENST00000574294 MFSD4AQ8N468 514 aa12.71□□□□□ -0.37
TVP23B-207ENST00000574294 OR13F1Q8NGS4 319 aa12.71□□□□□ -0.37
TVP23B-207ENST00000574294 GIMAP1Q8WWP7 306 aa12.71□□□□□ -0.37
TVP23B-207ENST00000574294 ZNF430Q9H8G1 570 aaPredicted RBP12.71□□□□□ -0.37
TVP23B-207ENST00000574294 IFT46Q9NQC8 304 aa12.71□□□□□ -0.37
TVP23B-207ENST00000574294 FAM223BA6NKX1 122 aa12.7□□□□□ -0.38
TVP23B-207ENST00000574294 TRIM64CA6NLI5 447 aa12.7□□□□□ -0.38
TVP23B-207ENST00000574294 OR2A4O95047 310 aa12.7□□□□□ -0.38
TVP23B-207ENST00000574294 PPYP01298 95 aa12.7□□□□□ -0.38
TVP23B-207ENST00000574294 RPL30P62888 115 aaKnown RBP12.7□□□□□ -0.38
TVP23B-207ENST00000574294 CATR1Q13166 79 aa12.7□□□□□ -0.38
TVP23B-207ENST00000574294 EIF4EBP1Q13541 118 aaPredicted RBP12.7□□□□□ -0.38
TVP23B-207ENST00000574294 TATDN3Q17R31 274 aa12.7□□□□□ -0.38
TVP23B-207ENST00000574294 MRGPRG-AS1Q2M3A8 158 aa12.7□□□□□ -0.38
TVP23B-207ENST00000574294 IDO2Q6ZQW0 420 aa12.7□□□□□ -0.38
TVP23B-207ENST00000574294 FAM223AQ8IWN6 122 aa12.7□□□□□ -0.38
TVP23B-207ENST00000574294 GVQW1Q8N7I0 195 aa12.7□□□□□ -0.38
TVP23B-207ENST00000574294 ADAD2Q8NCV1 583 aaKnown RBP12.7□□□□□ -0.38
TVP23B-207ENST00000574294 SECTM1Q8WVN6 248 aa12.7□□□□□ -0.38
TVP23B-207ENST00000574294 CMTM3Q96MX0 182 aa12.7□□□□□ -0.38
TVP23B-207ENST00000574294 OR2A7Q96R45 310 aa12.7□□□□□ -0.38
TVP23B-207ENST00000574294 PRR25Q96S07 402 aa12.7□□□□□ -0.38
TVP23B-207ENST00000574294 TAS2R8Q9NYW2 309 aa12.7□□□□□ -0.38
TVP23B-207ENST00000574294 KBTBD11O94819 623 aa12.69□□□□□ -0.38
TVP23B-207ENST00000574294 LY86O95711 162 aa12.69□□□□□ -0.38
TVP23B-207ENST00000574294 TMEM69Q5SWH9 247 aa12.69□□□□□ -0.38
TVP23B-207ENST00000574294 ZNF343Q6P1L6 599 aa12.69□□□□□ -0.38
TVP23B-207ENST00000574294 TTC9CQ8N5M4 171 aa12.69□□□□□ -0.38
TVP23B-207ENST00000574294 SAMD12Q8N8I0 201 aa12.69□□□□□ -0.38
TVP23B-207ENST00000574294 TMEM167AQ8TBQ9 72 aa12.69□□□□□ -0.38
TVP23B-207ENST00000574294 CD300LFQ8TDQ1 290 aa12.69□□□□□ -0.38
TVP23B-207ENST00000574294 SLC25A46Q96AG3 418 aa12.69□□□□□ -0.38
TVP23B-207ENST00000574294 SLC5A7Q9GZV3 580 aa12.69□□□□□ -0.38
TVP23B-207ENST00000574294 PLA2G2EQ9NZK7 142 aa12.69□□□□□ -0.38
TVP23B-207ENST00000574294 PEF1Q9UBV8 284 aaKnown RBP12.69□□□□□ -0.38
TVP23B-207ENST00000574294 SMAD5-AS1Q9Y6J3 95 aa12.69□□□□□ -0.38
TVP23B-207ENST00000574294 SMIM31A0A1B0GVY4 71 aa12.68□□□□□ -0.38
TVP23B-207ENST00000574294 DHFRP00374 187 aa12.68□□□□□ -0.38
TVP23B-207ENST00000574294 TAS2R46P59540 309 aa12.68□□□□□ -0.38
TVP23B-207ENST00000574294 OR2B11Q5JQS5 317 aa12.68□□□□□ -0.38
TVP23B-207ENST00000574294 PUSL1Q8N0Z8 303 aaKnown RBP12.68□□□□□ -0.38
TVP23B-207ENST00000574294 NECAP1Q8NC96 275 aa12.68□□□□□ -0.38
TVP23B-207ENST00000574294 OR4A5Q8NH83 315 aa12.68□□□□□ -0.38
TVP23B-207ENST00000574294 SNAPC3Q92966 411 aa12.68□□□□□ -0.38
TVP23B-207ENST00000574294 ZNF257Q9Y2Q1 563 aa12.68□□□□□ -0.38
TVP23B-207ENST00000574294 TRBV9A0A0B4J1U6 114 aa12.67□□□□□ -0.38
TVP23B-207ENST00000574294 FGF2P09038 288 aa12.67□□□□□ -0.38
TVP23B-207ENST00000574294 PRSS3P35030 304 aa12.67□□□□□ -0.38
TVP23B-207ENST00000574294 HERV-K104P61576 105 aa12.67□□□□□ -0.38
TVP23B-207ENST00000574294 LSM3P62310 102 aaKnown RBP12.67□□□□□ -0.38
TVP23B-207ENST00000574294 DYRK1AQ13627 763 aa12.67□□□□□ -0.38
TVP23B-207ENST00000574294 KLF5Q13887 457 aaPredicted RBP12.67□□□□□ -0.38
TVP23B-207ENST00000574294 FUNDC2Q9BWH2 189 aa12.67□□□□□ -0.38
TVP23B-207ENST00000574294 CCL28Q9NRJ3 127 aa12.67□□□□□ -0.38
TVP23B-207ENST00000574294 ANAPC10Q9UM13 185 aa12.67□□□□□ -0.38
TVP23B-207ENST00000574294 ANKRD34BA5PLL1 514 aa12.66□□□□□ -0.38
TVP23B-207ENST00000574294 DPPA5A6NC42 116 aa12.66□□□□□ -0.38
TVP23B-207ENST00000574294 HPRT1P00492 218 aa12.66□□□□□ -0.38
TVP23B-207ENST00000574294 APOA1P02647 267 aa12.66□□□□□ -0.38
TVP23B-207ENST00000574294 RPL27AP46776 148 aaKnown RBP12.66□□□□□ -0.38
TVP23B-207ENST00000574294 TAS2R31P59538 309 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms