RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 SGMS2Q8NHU3 365 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 GNPDA2Q8TDQ7 276 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 LMX1AQ8TE12 382 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 STARD4Q96DR4 205 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 ZHX1-C8orf76Q96EF9 292 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 NMNAT3Q96T66 252 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 MGLLQ99685 303 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 MND1Q9BWT6 205 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 RNASE7Q9H1E1 156 aaKnown RBP1.28□□□□□ -2.2
CHD3-217ENST00000574022 BOLA2Q9H3K6 86 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 BIN3Q9NQY0 253 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 CISHQ9NSE2 258 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 UQCC1Q9NVA1 299 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 OR5V1Q9UGF6 321 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 PYCARDQ9ULZ3 195 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 UTP11Q9Y3A2 253 aaKnown RBP1.28□□□□□ -2.2
CHD3-217ENST00000574022 TMEM56-RWDD3S4R434 201 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 U3KQK5 164 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 ROBO3Q96MS0 1386 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 CRB1P82279 1406 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 HECW1Q76N89 1606 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 ADAMTSL1Q8N6G6 1762 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 DOCK8Q8NF50 2099 aa1.28□□□□□ -2.2
CHD3-217ENST00000574022 CABIN1Q9Y6J0 2220 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 SCN1AP35498 2009 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 TRIP11Q15643 1979 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 DOCK5Q9H7D0 1870 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 REREQ9P2R6 1566 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 FHAD1B1AJZ9 1412 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 MIA2Q96PC5 1412 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 YEATS2Q9ULM3 1422 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 PTPRJQ12913 1337 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 TRBV20OR9-2A0A075B6H5 130 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 IGLV4-60A0A075B6I1 120 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 IGKV1D-37A0A075B6S9 117 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 IGHV3OR16-8A0A075B7F1 116 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 hCG_1818297A0A087WSY0 165 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 IGSF23A1L1A6 192 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 CYSRT1A8MQ03 144 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 A8MT66 165 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 C9JCJ5 164 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 PPP5D1E7EU14 171 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 SLC17A3O00476 420 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 PLA2G10O15496 165 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 S1PR2O95136 353 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 IFNA21P01568 189 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 IGHV3-53P01767 116 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 DNAH10OSP0CZ25 163 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 SULT1A3P0DMM9 295 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 SULT1A4P0DMN0 295 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 IFI30P13284 250 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 SLC25A16P16260 332 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 CRYBB3P26998 211 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 ERP29P30040 261 aaKnown RBP1.27□□□□□ -2.21
CHD3-217ENST00000574022 RAB13P51153 203 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 TCTAP57738 103 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 TSPEAR-AS2P59090 65 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 HSPE1P61604 102 aaKnown RBP1.27□□□□□ -2.21
CHD3-217ENST00000574022 RBX1P62877 108 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 FKBP1AP62942 108 aaKnown RBP1.27□□□□□ -2.21
CHD3-217ENST00000574022 SARNPP82979 210 aaKnown RBP1.27□□□□□ -2.21
CHD3-217ENST00000574022 TFAMQ00059 246 aaKnown RBP1.27□□□□□ -2.21
CHD3-217ENST00000574022 TNFRSF9Q07011 255 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 CST6Q15828 149 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 C12orf74Q32Q52 190 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 LGALSLQ3ZCW2 172 aaPredicted RBP1.27□□□□□ -2.21
CHD3-217ENST00000574022 TNFAIP8L3Q5GJ75 292 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 ZFAND6Q6FIF0 208 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 SMARCD3Q6STE5 483 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 RASL11AQ6T310 242 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 GOLT1AQ6ZVE7 132 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 GPHB5Q86YW7 130 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 OR11H1Q8NG94 326 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 OR10A6Q8NH74 314 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 FNDC9Q8TBE3 224 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 MRPL30Q8TCC3 161 aaKnown RBP1.27□□□□□ -2.21
CHD3-217ENST00000574022 RPS4Y2Q8TD47 263 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 RASSF5Q8WWW0 418 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 ACOT12Q8WYK0 555 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 RNASE6Q93091 150 aaKnown RBP1.27□□□□□ -2.21
CHD3-217ENST00000574022 GPR146Q96CH1 333 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 ERMAPQ96PL5 475 aaPredicted RBP1.27□□□□□ -2.21
CHD3-217ENST00000574022 GINS3Q9BRX5 216 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 UPK3BQ9BT76 320 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 SCRT1Q9BWW7 348 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 KRTAP4-2Q9BYR5 136 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 WDR61Q9GZS3 305 aaKnown RBP1.27□□□□□ -2.21
CHD3-217ENST00000574022 CCDC90BQ9GZT6 254 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 ABCG5Q9H222 651 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 C11orf1Q9H5F2 150 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 FBXL12Q9NXK8 326 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 SMPXQ9UHP9 88 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 KLK5Q9Y337 293 aaPredicted RBP1.27□□□□□ -2.21
CHD3-217ENST00000574022 UFC1Q9Y3C8 167 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 OTOFQ9HC10 1997 aa1.27□□□□□ -2.21
CHD3-217ENST00000574022 SLIT3O75094 1523 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 DENND4BO75064 1496 aaPredicted RBP1.26□□□□□ -2.21
CHD3-217ENST00000574022 NID2Q14112 1375 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 A0A087WUU8 490 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 A0A1B0GW54 56 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms