RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 CD83Q01151 205 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 CFHR3Q02985 330 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 CATR1Q13166 79 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 PYDC2Q56P42 97 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 TREML4Q6UXN2 200 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 PPP1R27Q86WC6 154 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 VKORC1L1Q8N0U8 176 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 SPAG16Q8N0X2 631 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 ARRDC1Q8N5I2 433 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 GRPEL2Q8TAA5 225 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 BORCS5Q969J3 196 aa12.41□□□□□ -0.42
CHD3-215ENST00000572750 FAM103A1Q9BTL3 118 aaKnown RBP12.41□□□□□ -0.42
CHD3-215ENST00000572750 TCRBV4S1A1TA0A5B7 111 aa12.4□□□□□ -0.42
CHD3-215ENST00000572750 GPR31O00270 319 aa12.4□□□□□ -0.42
CHD3-215ENST00000572750 KIR2DS2P43631 304 aa12.4□□□□□ -0.42
CHD3-215ENST00000572750 UBE2KP61086 200 aa12.4□□□□□ -0.42
CHD3-215ENST00000572750 VMA21Q3ZAQ7 101 aa12.4□□□□□ -0.42
CHD3-215ENST00000572750 SCGB2B2Q4G0G5 96 aa12.4□□□□□ -0.42
CHD3-215ENST00000572750 LCNL1Q6ZST4 164 aa12.4□□□□□ -0.42
CHD3-215ENST00000572750 LHFPL1Q86WI0 220 aa12.4□□□□□ -0.42
CHD3-215ENST00000572750 NDUFA11Q86Y39 141 aa12.4□□□□□ -0.42
CHD3-215ENST00000572750 CMTM1Q8IZ96 169 aa12.4□□□□□ -0.42
CHD3-215ENST00000572750 OR4C16Q8NGL9 310 aa12.4□□□□□ -0.42
CHD3-215ENST00000572750 OR6Q1Q8NGQ2 317 aa12.4□□□□□ -0.42
CHD3-215ENST00000572750 ARPC1AQ92747 370 aa12.4□□□□□ -0.42
CHD3-215ENST00000572750 RSRP1Q9BUV0 290 aa12.4□□□□□ -0.42
CHD3-215ENST00000572750 TRAV41A0A0B4J266 112 aa12.39□□□□□ -0.43
CHD3-215ENST00000572750 ARPC1BO15143 372 aaKnown RBP12.39□□□□□ -0.43
CHD3-215ENST00000572750 PGLYRP1O75594 196 aaPredicted RBP12.39□□□□□ -0.43
CHD3-215ENST00000572750 AKAIN1P0CW23 69 aa12.39□□□□□ -0.43
CHD3-215ENST00000572750 PGAM2P15259 253 aa12.39□□□□□ -0.43
CHD3-215ENST00000572750 MRGPRG-AS1Q2M3A8 158 aa12.39□□□□□ -0.43
CHD3-215ENST00000572750 SPANXN2Q5MJ10 180 aa12.39□□□□□ -0.43
CHD3-215ENST00000572750 SLC38A6Q8IZM9 456 aa12.39□□□□□ -0.43
CHD3-215ENST00000572750 TRIM63Q969Q1 353 aa12.39□□□□□ -0.43
CHD3-215ENST00000572750 GON7Q9BXV9 100 aa12.39□□□□□ -0.43
CHD3-215ENST00000572750 ZNF580Q9UK33 172 aa12.39□□□□□ -0.43
CHD3-215ENST00000572750 ANKRD20A5PA0PJZ0 165 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 RBFOX2O43251 390 aaKnown RBP eCLIP12.38□□□□□ -0.43
CHD3-215ENST00000572750 S1PR2O95136 353 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 OPN1MWP04001 364 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 ZNF735P0CB33 412 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 OPN1MW2P0DN77 364 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 OPN1MW3P0DN78 364 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 EGR2P11161 476 aaPredicted RBP12.38□□□□□ -0.43
CHD3-215ENST00000572750 PI3P19957 117 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 FXYD3Q14802 87 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 MEF2DQ14814 521 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 C19orf54Q5BKX5 351 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 ZNF562Q6V9R5 426 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 SSX9Q7RTT3 188 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 Q8N402 240 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 TEX45Q8NA69 505 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 MRGPRFQ96AM1 343 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 THAP7Q9BT49 309 aaPredicted RBP12.38□□□□□ -0.43
CHD3-215ENST00000572750 ZNF430Q9H8G1 570 aaPredicted RBP12.38□□□□□ -0.43
CHD3-215ENST00000572750 SLC2A9Q9NRM0 540 aa12.38□□□□□ -0.43
CHD3-215ENST00000572750 TSSC4Q9Y5U2 329 aaPredicted RBP12.38□□□□□ -0.43
CHD3-215ENST00000572750 CNIH1O95406 144 aa12.37□□□□□ -0.43
CHD3-215ENST00000572750 IGHG4P01861 327 aa12.37□□□□□ -0.43
CHD3-215ENST00000572750 RPLP1P05386 114 aaKnown RBP12.37□□□□□ -0.43
CHD3-215ENST00000572750 ETV6P41212 452 aa12.37□□□□□ -0.43
CHD3-215ENST00000572750 UCP3P55916 312 aa12.37□□□□□ -0.43
CHD3-215ENST00000572750 TNXAQ16473 311 aa12.37□□□□□ -0.43
CHD3-215ENST00000572750 PRSS8Q16651 343 aa12.37□□□□□ -0.43
CHD3-215ENST00000572750 LPCAT3Q6P1A2 487 aa12.37□□□□□ -0.43
CHD3-215ENST00000572750 TEX38Q6PEX7 206 aa12.37□□□□□ -0.43
CHD3-215ENST00000572750 TBC1D26Q86UD7 250 aa12.37□□□□□ -0.43
CHD3-215ENST00000572750 COMMD1Q8N668 190 aa12.37□□□□□ -0.43
CHD3-215ENST00000572750 POC5Q8NA72 575 aa12.37□□□□□ -0.43
CHD3-215ENST00000572750 OR13C8Q8NGS7 320 aa12.37□□□□□ -0.43
CHD3-215ENST00000572750 FAM110DQ8TAY7 271 aaPredicted RBP12.37□□□□□ -0.43
CHD3-215ENST00000572750 RHOVQ96L33 236 aa12.37□□□□□ -0.43
CHD3-215ENST00000572750 TNCP24821 2201 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 A0A1W2PN81 502 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 DISC1C4P0D8 188 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 SOX15O60248 233 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 KBTBD11O94819 623 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 APELAP0DMC3 54 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 PSMB8P28062 276 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 S100GP29377 79 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 PPIFP30405 207 aaKnown RBP12.36□□□□□ -0.43
CHD3-215ENST00000572750 CHRNA7P36544 502 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 CRIP2P52943 208 aaPredicted RBP12.36□□□□□ -0.43
CHD3-215ENST00000572750 RPL23AP62750 156 aaKnown RBP12.36□□□□□ -0.43
CHD3-215ENST00000572750 FOXE3Q13461 319 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 CXorf66Q5JRM2 361 aaPredicted RBP12.36□□□□□ -0.43
CHD3-215ENST00000572750 C10orf55Q5SWW7 151 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 C18orf65Q6ZTR6 163 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 LFNGQ8NES3 379 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 TERB2Q8NHR7 220 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 MARCH1Q8TCQ1 289 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 CASTOR1Q8WTX7 329 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 R3HDM4Q96D70 268 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 SRRQ9GZT4 340 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 MCUBQ9NWR8 336 aa12.36□□□□□ -0.43
CHD3-215ENST00000572750 FOXA2Q9Y261 457 aaPredicted RBP12.36□□□□□ -0.43
CHD3-215ENST00000572750 A6NHS1 94 aa12.35□□□□□ -0.43
CHD3-215ENST00000572750 CREBL2O60519 120 aaPredicted RBP12.35□□□□□ -0.43
CHD3-215ENST00000572750 OR2A4O95047 310 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms