RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 KCTD12Q96CX2 325 aaKnown RBP14.3□□□□□ -0.12
NUP88-203ENST00000572019 PLCXD1Q9NUJ7 323 aa14.3□□□□□ -0.12
NUP88-203ENST00000572019 TECRQ9NZ01 308 aaKnown RBP14.3□□□□□ -0.12
NUP88-203ENST00000572019 TEX22C9J3V5 150 aa14.29□□□□□ -0.12
NUP88-203ENST00000572019 LGALS9O00182 355 aa14.29□□□□□ -0.12
NUP88-203ENST00000572019 TUSC2O75896 110 aa14.29□□□□□ -0.12
NUP88-203ENST00000572019 NDUFB8O95169 186 aa14.29□□□□□ -0.12
NUP88-203ENST00000572019 SERPINB10P48595 397 aa14.29□□□□□ -0.12
NUP88-203ENST00000572019 VKORC1L1Q8N0U8 176 aa14.29□□□□□ -0.12
NUP88-203ENST00000572019 OR10J5Q8NHC4 309 aa14.29□□□□□ -0.12
NUP88-203ENST00000572019 LOC102724200A0A096LPH7 203 aaPredicted RBP14.28□□□□□ -0.12
NUP88-203ENST00000572019 J3QRK9 145 aa14.28□□□□□ -0.12
NUP88-203ENST00000572019 GGCTO75223 188 aaKnown RBP14.28□□□□□ -0.12
NUP88-203ENST00000572019 RAB11BQ15907 218 aa14.28□□□□□ -0.12
NUP88-203ENST00000572019 C2orf76Q3KRA6 126 aa14.28□□□□□ -0.12
NUP88-203ENST00000572019 OR2B11Q5JQS5 317 aa14.28□□□□□ -0.12
NUP88-203ENST00000572019 CEMP1Q6PRD7 247 aaPredicted RBP14.28□□□□□ -0.12
NUP88-203ENST00000572019 CLEC19AQ6UXS0 136 aa14.28□□□□□ -0.12
NUP88-203ENST00000572019 LYG2Q86SG7 212 aa14.28□□□□□ -0.12
NUP88-203ENST00000572019 OR52B4Q8NGK2 314 aa14.28□□□□□ -0.12
NUP88-203ENST00000572019 FANCD2OSQ96PS1 177 aa14.28□□□□□ -0.12
NUP88-203ENST00000572019 FBXL7Q9UJT9 491 aa14.28□□□□□ -0.12
NUP88-203ENST00000572019 TMEM272A0A1B0GTI8 110 aa14.27□□□□□ -0.13
NUP88-203ENST00000572019 CDK1P06493 297 aa14.27□□□□□ -0.13
NUP88-203ENST00000572019 IL6RP08887 468 aaPredicted RBP14.27□□□□□ -0.13
NUP88-203ENST00000572019 RRASP10301 218 aa14.27□□□□□ -0.13
NUP88-203ENST00000572019 RPS25P62851 125 aaKnown RBP14.27□□□□□ -0.13
NUP88-203ENST00000572019 RPL30P62888 115 aaKnown RBP14.27□□□□□ -0.13
NUP88-203ENST00000572019 CBX3Q13185 183 aa14.27□□□□□ -0.13
NUP88-203ENST00000572019 CDK10Q15131 360 aa14.27□□□□□ -0.13
NUP88-203ENST00000572019 TM4SF20Q53R12 229 aa14.27□□□□□ -0.13
NUP88-203ENST00000572019 LIPKQ5VXJ0 399 aa14.27□□□□□ -0.13
NUP88-203ENST00000572019 ZNF57Q68EA5 555 aaPredicted RBP14.27□□□□□ -0.13
NUP88-203ENST00000572019 BTNL8Q6UX41 500 aa14.27□□□□□ -0.13
NUP88-203ENST00000572019 UNQ9165/PRO28630Q6UXU0 137 aa14.27□□□□□ -0.13
NUP88-203ENST00000572019 SLC16A13Q7RTY0 426 aa14.27□□□□□ -0.13
NUP88-203ENST00000572019 GPHB5Q86YW7 130 aa14.27□□□□□ -0.13
NUP88-203ENST00000572019 C8orf59Q8N0T1 100 aaPredicted RBP14.27□□□□□ -0.13
NUP88-203ENST00000572019 UXS1Q8NBZ7 420 aa14.27□□□□□ -0.13
NUP88-203ENST00000572019 FAM3DQ96BQ1 224 aa14.27□□□□□ -0.13
NUP88-203ENST00000572019 NUPR2A6NF83 97 aa14.26□□□□□ -0.13
NUP88-203ENST00000572019 MYOD1P15172 320 aa14.26□□□□□ -0.13
NUP88-203ENST00000572019 AREGP15514 252 aa14.26□□□□□ -0.13
NUP88-203ENST00000572019 GNB3P16520 340 aa14.26□□□□□ -0.13
NUP88-203ENST00000572019 SPHARQ15513 63 aa14.26□□□□□ -0.13
NUP88-203ENST00000572019 C10orf67Q8IYJ2 551 aa14.26□□□□□ -0.13
NUP88-203ENST00000572019 H1FOOQ8IZA3 346 aaPredicted RBP14.26□□□□□ -0.13
NUP88-203ENST00000572019 OSR1Q8TAX0 266 aaPredicted RBP14.26□□□□□ -0.13
NUP88-203ENST00000572019 SPIN2AQ99865 258 aa14.26□□□□□ -0.13
NUP88-203ENST00000572019 SPIN2BQ9BPZ2 258 aa14.26□□□□□ -0.13
NUP88-203ENST00000572019 MND1Q9BWT6 205 aa14.26□□□□□ -0.13
NUP88-203ENST00000572019 ELF5Q9UKW6 265 aaPredicted RBP14.26□□□□□ -0.13
NUP88-203ENST00000572019 RBM7Q9Y580 266 aaKnown RBP14.26□□□□□ -0.13
NUP88-203ENST00000572019 VPS13DQ5THJ4 4388 aa14.25□□□□□ -0.13
NUP88-203ENST00000572019 ZNF320A2RRD8 509 aa14.25□□□□□ -0.13
NUP88-203ENST00000572019 DENRO43583 198 aaKnown RBP14.25□□□□□ -0.13
NUP88-203ENST00000572019 FCGR3BO75015 233 aa14.25□□□□□ -0.13
NUP88-203ENST00000572019 ARL3P36405 182 aa14.25□□□□□ -0.13
NUP88-203ENST00000572019 DEFB135Q30KP9 77 aa14.25□□□□□ -0.13
NUP88-203ENST00000572019 HES5Q5TA89 166 aa14.25□□□□□ -0.13
NUP88-203ENST00000572019 OR56B1Q8NGI3 324 aa14.25□□□□□ -0.13
NUP88-203ENST00000572019 ZNF257Q9Y2Q1 563 aa14.25□□□□□ -0.13
NUP88-203ENST00000572019 PCLOQ9Y6V0 5065 aa14.25□□□□□ -0.13
NUP88-203ENST00000572019 KIAA1109Q2LD37 5005 aa14.24□□□□□ -0.13
NUP88-203ENST00000572019 A0A075B6Q4 140 aa14.24□□□□□ -0.13
NUP88-203ENST00000572019 A8MWP6 167 aa14.24□□□□□ -0.13
NUP88-203ENST00000572019 MFNGO00587 321 aa14.24□□□□□ -0.13
NUP88-203ENST00000572019 IGLV2-14P01704 120 aa14.24□□□□□ -0.13
NUP88-203ENST00000572019 BRWD1-AS2P59051 145 aa14.24□□□□□ -0.13
NUP88-203ENST00000572019 TNFRSF9Q07011 255 aa14.24□□□□□ -0.13
NUP88-203ENST00000572019 MED22Q15528 200 aa14.24□□□□□ -0.13
NUP88-203ENST00000572019 WFDC3Q8IUB2 231 aa14.24□□□□□ -0.13
NUP88-203ENST00000572019 MMD2Q8IY49 270 aa14.24□□□□□ -0.13
NUP88-203ENST00000572019 RAB3CQ96E17 227 aa14.24□□□□□ -0.13
NUP88-203ENST00000572019 ADTRPQ96IZ2 230 aa14.24□□□□□ -0.13
NUP88-203ENST00000572019 FYTTD1Q96QD9 318 aaKnown RBP14.24□□□□□ -0.13
NUP88-203ENST00000572019 UBQLN2Q9UHD9 624 aa14.24□□□□□ -0.13
NUP88-203ENST00000572019 MFSD2BA6NFX1 497 aa14.23□□□□□ -0.13
NUP88-203ENST00000572019 PTGES3LE9PB15 166 aa14.23□□□□□ -0.13
NUP88-203ENST00000572019 ACTL6BO94805 426 aa14.23□□□□□ -0.13
NUP88-203ENST00000572019 S1PR2O95136 353 aa14.23□□□□□ -0.13
NUP88-203ENST00000572019 IRF3Q14653 427 aa14.23□□□□□ -0.13
NUP88-203ENST00000572019 GPHA2Q96T91 129 aa14.23□□□□□ -0.13
NUP88-203ENST00000572019 GINS4Q9BRT9 223 aa14.23□□□□□ -0.13
NUP88-203ENST00000572019 DCUN1D5Q9BTE7 237 aa14.23□□□□□ -0.13
NUP88-203ENST00000572019 HECTD4Q9Y4D8 3996 aa14.22□□□□□ -0.13
NUP88-203ENST00000572019 IGHV3-35A0A0C4DH35 117 aa14.22□□□□□ -0.13
NUP88-203ENST00000572019 CGB1A6NKQ9 187 aa14.22□□□□□ -0.13
NUP88-203ENST00000572019 NPIPB5A8MRT5 1133 aa14.22□□□□□ -0.13
NUP88-203ENST00000572019 RAB27BO00194 218 aa14.22□□□□□ -0.13
NUP88-203ENST00000572019 SPRY2O43597 315 aa14.22□□□□□ -0.13
NUP88-203ENST00000572019 REG1AP05451 166 aa14.22□□□□□ -0.13
NUP88-203ENST00000572019 TPBGQ13641 420 aa14.22□□□□□ -0.13
NUP88-203ENST00000572019 PACRGLQ8N7B6 248 aa14.22□□□□□ -0.13
NUP88-203ENST00000572019 IGKV1D-13A0A0B4J2D9 117 aa14.21□□□□□ -0.13
NUP88-203ENST00000572019 DIRAS3O95661 229 aa14.21□□□□□ -0.13
NUP88-203ENST00000572019 ZNF735P0CB33 412 aa14.21□□□□□ -0.13
NUP88-203ENST00000572019 IGKV1-13P0DP09 117 aa14.21□□□□□ -0.13
NUP88-203ENST00000572019 CALRP27797 417 aaKnown RBP14.21□□□□□ -0.13
NUP88-203ENST00000572019 OR10A3P58181 314 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms