RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 OR5C1Q8NGR4 320 aa5□□□□□ -1.61
TRAPPC1-204ENST00000571947 OR10X1Q8NGY0 326 aa5□□□□□ -1.61
TRAPPC1-204ENST00000571947 OR52E5Q8NH55 327 aa5□□□□□ -1.61
TRAPPC1-204ENST00000571947 OR4A16Q8NH70 328 aa5□□□□□ -1.61
TRAPPC1-204ENST00000571947 RNF141Q8WVD5 230 aa5□□□□□ -1.61
TRAPPC1-204ENST00000571947 SAT2Q96F10 170 aaPredicted RBP5□□□□□ -1.61
TRAPPC1-204ENST00000571947 CIB3Q96Q77 187 aaPredicted RBP5□□□□□ -1.61
TRAPPC1-204ENST00000571947 CITED4Q96RK1 184 aa5□□□□□ -1.61
TRAPPC1-204ENST00000571947 NABP2Q9BQ15 211 aa5□□□□□ -1.61
TRAPPC1-204ENST00000571947 AIFM2Q9BRQ8 373 aa5□□□□□ -1.61
TRAPPC1-204ENST00000571947 PCGF1Q9BSM1 259 aa5□□□□□ -1.61
TRAPPC1-204ENST00000571947 SSBP3Q9BWW4 388 aaPredicted RBP5□□□□□ -1.61
TRAPPC1-204ENST00000571947 CLEC7AQ9BXN2 247 aa5□□□□□ -1.61
TRAPPC1-204ENST00000571947 QTRT1Q9BXR0 403 aaKnown RBP5□□□□□ -1.61
TRAPPC1-204ENST00000571947 MRPL20Q9BYC9 149 aaKnown RBP5□□□□□ -1.61
TRAPPC1-204ENST00000571947 REG4Q9BYZ8 158 aa5□□□□□ -1.61
TRAPPC1-204ENST00000571947 BARX1Q9HBU1 254 aaPredicted RBP5□□□□□ -1.61
TRAPPC1-204ENST00000571947 TMEM140Q9NV12 185 aa5□□□□□ -1.61
TRAPPC1-204ENST00000571947 LRBAP50851 2863 aa5□□□□□ -1.61
TRAPPC1-204ENST00000571947 USP9XQ93008 2570 aaPredicted RBP5□□□□□ -1.61
TRAPPC1-204ENST00000571947 NAV3Q8IVL0 2385 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 LOC105371242A0A075B767 164 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 IGHV2-26A0A0B4J1V2 119 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 TRAV3A0A0B4J244 114 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 MFSD2BA6NFX1 497 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 C15orf61A6NNL5 157 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 PMS2P5A8MQ11 134 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 CEBPZOSA8MTT3 80 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 C22orf46C9J442 243 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 H0YJW9 148 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 M0R1W7 72 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 UPK2O00526 184 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 FBXO24O75426 580 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 RBMXL2O75526 392 aaKnown RBP4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 DFFBO76075 338 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 SCAF4O95104 1147 aaKnown RBP4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 IGLV1-47P01700 117 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 METTL15P1P0C7V9 234 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 MC5RP33032 325 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 OR2B8PP59922 312 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 BLOC1S1P78537 153 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 CLINT1Q14677 625 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 AANATQ16613 207 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 HLA-DRB5Q30154 266 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 SPANXN5Q5MJ07 72 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 OR4A47Q6IF82 309 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 SSX9Q7RTT3 188 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 HSD17B13Q7Z5P4 300 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 PDPNQ86YL7 162 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 VKORC1L1Q8N0U8 176 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 EIF4E3Q8N5X7 224 aaKnown RBP4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 ZNF525Q8N782 197 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 BEND2Q8NDZ0 799 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 OR13D1Q8NGV5 346 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 OSR1Q8TAX0 266 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 DTD1Q8TEA8 209 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 RHOVQ96L33 236 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 OR4C12Q96R67 309 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 ATP5SQ99766 215 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 BET1LQ9NYM9 111 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 FOXA2Q9Y261 457 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 WASHC3Q9Y3C0 194 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 STRAPQ9Y3F4 350 aaKnown RBP4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 AMMECR1Q9Y4X0 333 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 CR1P17927 2039 aa4.99□□□□□ -1.61
TRAPPC1-204ENST00000571947 FLNCQ14315 2725 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 ZNF705EA8MWA4 302 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 A8MXK9 166 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 NUDT19A8MXV4 375 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 BUB1B-PAK6H3BSN5 160 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 H7C2Y5 167 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 SHOXO15266 292 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 IFNA5P01569 189 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 IFNA17P01571 189 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 IGHV2-5P01817 119 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 IGHV4-39P01824 125 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 ARG1P05089 322 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 FGF2P09038 288 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 ATP6V0CP27449 155 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 VDAC2P45880 294 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 REG1BP48304 166 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 PDLIM4P50479 330 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 RAB5CP51148 216 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 RAB13P51153 203 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 HSPE1P61604 102 aaKnown RBP4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 HBG1P69891 147 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 HBG2P69892 147 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 SRSF1Q07955 248 aaKnown RBP eCLIP4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 SLC38A11Q08AI6 406 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 ARL16Q0P5N6 197 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 DIAPH2-AS1Q14236 149 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 ATP6V1FQ16864 119 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 C1orf122Q6ZSJ8 110 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 TGIF2LXQ8IUE1 241 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 PUSL1Q8N0Z8 303 aaKnown RBP4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 KIR3DL3Q8N743 410 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 TMEM217Q8N7C4 229 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 Q8N7P7 452 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 HSD17B11Q8NBQ5 300 aa4.98□□□□□ -1.61
TRAPPC1-204ENST00000571947 LHX4Q969G2 390 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms