RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 TRAPPC1Q9Y5R8 145 aa14.08□□□□□ -0.16
PCDHB19P-201ENST00000570871 MARCH11A6NNE9 402 aa14.08□□□□□ -0.16
PCDHB19P-201ENST00000570871 C9orf172C9J069 976 aa14.08□□□□□ -0.16
PCDHB19P-201ENST00000570871 J3QW42 95 aa14.08□□□□□ -0.16
PCDHB19P-201ENST00000570871 EREGO14944 169 aa14.08□□□□□ -0.16
PCDHB19P-201ENST00000570871 CD99P14209 185 aa14.08□□□□□ -0.16
PCDHB19P-201ENST00000570871 SSTR5P35346 364 aa14.08□□□□□ -0.16
PCDHB19P-201ENST00000570871 IQCJQ1A5X6 159 aa14.08□□□□□ -0.16
PCDHB19P-201ENST00000570871 DCAF10Q5QP82 559 aa14.08□□□□□ -0.16
PCDHB19P-201ENST00000570871 TPRX1Q8N7U7 411 aa14.08□□□□□ -0.16
PCDHB19P-201ENST00000570871 LURAP1Q96LR2 239 aa14.08□□□□□ -0.16
PCDHB19P-201ENST00000570871 TAAR6Q96RI8 345 aa14.08□□□□□ -0.16
PCDHB19P-201ENST00000570871 DEFB108AA8MXU0 73 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 IQCF6A8MYZ5 107 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 CD1BP29016 333 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 MRPL49Q13405 166 aaKnown RBP14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 GABRA6Q16445 453 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 TMEM256Q8N2U0 113 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 DEFB127Q9H1M4 99 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 FOXJ2Q9P0K8 574 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 AKAP13Q12802 2813 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 OR9G9P0C7N8 305 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 MPV17P39210 176 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 TEX38Q6PEX7 206 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 TCTEX1D1Q8N7M0 179 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 RFESDQ8TAC1 157 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 ZPBPQ9BS86 351 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 PATZ1Q9HBE1 687 aaKnown RBP14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 OBP2BQ9NPH6 170 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 KCNIP2Q9NS61 270 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 PSG11Q9UQ72 335 aa14.07□□□□□ -0.16
PCDHB19P-201ENST00000570871 TMEM210A6NLX4 147 aa14.06□□□□□ -0.16
PCDHB19P-201ENST00000570871 RBFOX2O43251 390 aaKnown RBP eCLIP14.06□□□□□ -0.16
PCDHB19P-201ENST00000570871 SP1P08047 785 aa14.06□□□□□ -0.16
PCDHB19P-201ENST00000570871 C11orf53Q8IXP5 236 aa14.06□□□□□ -0.16
PCDHB19P-201ENST00000570871 PXMP4Q9Y6I8 212 aa14.06□□□□□ -0.16
PCDHB19P-201ENST00000570871 TRBV20OR9-2A0A075B6H5 130 aa14.05□□□□□ -0.16
PCDHB19P-201ENST00000570871 A0A1W2PPV4 95 aa14.05□□□□□ -0.16
PCDHB19P-201ENST00000570871 NUPR1O60356 82 aa14.05□□□□□ -0.16
PCDHB19P-201ENST00000570871 SCGB1D1O95968 90 aa14.05□□□□□ -0.16
PCDHB19P-201ENST00000570871 OR13A1Q8NGR1 328 aa14.05□□□□□ -0.16
PCDHB19P-201ENST00000570871 RAB1CQ92928 201 aa14.05□□□□□ -0.16
PCDHB19P-201ENST00000570871 R3HDM4Q96D70 268 aa14.05□□□□□ -0.16
PCDHB19P-201ENST00000570871 FKBP11Q9NYL4 201 aa14.05□□□□□ -0.16
PCDHB19P-201ENST00000570871 METRNQ9UJH8 293 aa14.05□□□□□ -0.16
PCDHB19P-201ENST00000570871 GCH1P30793 250 aa14.05□□□□□ -0.16
PCDHB19P-201ENST00000570871 FOXL1Q12952 345 aa14.05□□□□□ -0.16
PCDHB19P-201ENST00000570871 TMEM249Q2WGJ8 235 aa14.05□□□□□ -0.16
PCDHB19P-201ENST00000570871 SGMS2Q8NHU3 365 aa14.05□□□□□ -0.16
PCDHB19P-201ENST00000570871 HSD17B10Q99714 261 aaKnown RBP14.05□□□□□ -0.16
PCDHB19P-201ENST00000570871 WISP2O76076 250 aa14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 SPCS3P61009 180 aa14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 ACP7Q6ZNF0 438 aa14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 TCF23Q7RTU1 214 aa14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 KLF14Q8TD94 323 aaPredicted RBP14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 SFRP2Q96HF1 295 aa14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 IMMP2LQ96T52 175 aa14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 TMEM204Q9BSN7 226 aa14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 ELOVL5Q9NYP7 299 aa14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 F6UZH7 168 aa14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 FOSL1P15407 271 aa14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 UBE2NP61088 152 aaKnown RBP14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 NUTF2P61970 127 aaKnown RBP14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 FOXF2Q12947 444 aa14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 TMPRSS7Q7RTY8 843 aa14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 SDSLQ96GA7 329 aa14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 DCTN5Q9BTE1 182 aa14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 SPRR3Q9UBC9 169 aa14.04□□□□□ -0.16
PCDHB19P-201ENST00000570871 TCAPO15273 167 aa14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 LYZL6O75951 148 aa14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 ARL14EPLP0DKL9 152 aa14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 IGHV1-2P23083 117 aa14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 RAB4BP61018 213 aa14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 PRAMEF6Q5VXH4 476 aa14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 DEFB124Q8NES8 71 aa14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 NEU1Q99519 415 aa14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 SNHG12Q9BXW3 62 aa14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 KLF13Q9Y2Y9 288 aaPredicted RBP14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 SOX8P57073 446 aa14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 TRIP6Q15654 476 aaKnown RBP14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 ZNF124Q15973 351 aa14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 LTC4SQ16873 150 aa14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 TREML4Q6UXN2 200 aa14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 BTF3L4Q96K17 158 aa14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 CBLN4Q9NTU7 201 aa14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 POLR3KQ9Y2Y1 108 aaPredicted RBP14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 DSPP15924 2871 aaKnown RBP14.03□□□□□ -0.16
PCDHB19P-201ENST00000570871 SPAARA0A1B0GVQ0 90 aa14.02□□□□□ -0.16
PCDHB19P-201ENST00000570871 MDFIC2A0A1B0GVS7 189 aa14.02□□□□□ -0.16
PCDHB19P-201ENST00000570871 KLRC4-KLRK1H3BQV0 150 aa14.02□□□□□ -0.16
PCDHB19P-201ENST00000570871 RRHO14718 337 aa14.02□□□□□ -0.16
PCDHB19P-201ENST00000570871 PROP1O75360 226 aa14.02□□□□□ -0.16
PCDHB19P-201ENST00000570871 HNF1AP20823 631 aa14.02□□□□□ -0.16
PCDHB19P-201ENST00000570871 ADMP35318 185 aa14.02□□□□□ -0.16
PCDHB19P-201ENST00000570871 RNFT1Q5M7Z0 435 aa14.02□□□□□ -0.16
PCDHB19P-201ENST00000570871 WDR31Q8NA23 367 aa14.02□□□□□ -0.16
PCDHB19P-201ENST00000570871 MDS2Q8NDY4 140 aa14.02□□□□□ -0.16
PCDHB19P-201ENST00000570871 PLPPR2Q96GM1 343 aa14.02□□□□□ -0.16
PCDHB19P-201ENST00000570871 ATG101Q9BSB4 218 aa14.02□□□□□ -0.16
PCDHB19P-201ENST00000570871 SCO2A0A1W2PP80 73 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms