RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 LINC00596Q86U02 117 aa12.84□□□□□ -0.35
USP43-202ENST00000570475 UBALD2Q8IYN6 164 aa12.84□□□□□ -0.35
USP43-202ENST00000570475 FAM122AQ96E09 287 aa12.84□□□□□ -0.35
USP43-202ENST00000570475 MISP3Q96FF7 219 aa12.84□□□□□ -0.35
USP43-202ENST00000570475 COX5BP10606 129 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 SMIM21Q3B7S5 101 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 TGIF2LXQ8IUE1 241 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 LYG1Q8N1E2 194 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 RPH3ALQ9UNE2 315 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 KIAA1644Q3SXP7 199 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 HES3Q5TGS1 186 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 VWA1Q6PCB0 445 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 OR4P4Q8NGL7 312 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 TAAR6Q96RI8 345 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 ASPMQ8IZT6 3477 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 AKAP6Q13023 2319 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 LNP1A1A4G5 178 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 TGOLN2O43493 480 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 WISP2O76076 250 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 IGHV3-48P01763 117 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 IGHV1-2P23083 117 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 CBLN1P23435 193 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 CNN1P51911 297 aaKnown RBP12.83□□□□□ -0.36
USP43-202ENST00000570475 ERVFC1-1P60608 527 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 C21orf62-AS1Q17RA5 79 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 PRR31Q5SQ13 230 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 TMEM256Q8N2U0 113 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 TMEM178AQ8NBL3 297 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 SPRR3Q9UBC9 169 aa12.83□□□□□ -0.36
USP43-202ENST00000570475 BOD1L1Q8NFC6 3051 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 TRAV1-1A0A0B4J248 108 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 IGLV2-14P01704 120 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 NUBP1P53384 320 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 PAX5Q02548 391 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 ZNF718Q3SXZ3 478 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 Q6ZS49 121 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 FKBP11Q9NYL4 201 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 M0R1B8 84 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 NKX2-8O15522 239 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 SELLP14151 372 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 HSD17B10Q99714 261 aaKnown RBP12.82□□□□□ -0.36
USP43-202ENST00000570475 MANBALQ9NQG1 85 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 TRBV24-1A0A075B6N3 115 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 TRAV3A0A0B4J244 114 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 RRHO14718 337 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 OR4A8P0C604 315 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 OR9G9P0C7N8 305 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 MYOD1P15172 320 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 REC114Q7Z4M0 266 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 ZNF664Q8N3J9 261 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 PAM16Q9Y3D7 125 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 PXMP4Q9Y6I8 212 aa12.82□□□□□ -0.36
USP43-202ENST00000570475 SCO2A0A1W2PP80 73 aa12.81□□□□□ -0.36
USP43-202ENST00000570475 GZMBP10144 247 aa12.81□□□□□ -0.36
USP43-202ENST00000570475 GATA2P23769 480 aaPredicted RBP12.81□□□□□ -0.36
USP43-202ENST00000570475 IER3P46695 156 aa12.81□□□□□ -0.36
USP43-202ENST00000570475 KRTDAPP60985 99 aa12.81□□□□□ -0.36
USP43-202ENST00000570475 SRSF6Q13247 344 aaKnown RBP12.81□□□□□ -0.36
USP43-202ENST00000570475 KRTAP27-1Q3LI81 207 aa12.81□□□□□ -0.36
USP43-202ENST00000570475 FAM216AQ8WUB2 273 aa12.81□□□□□ -0.36
USP43-202ENST00000570475 YPEL4Q96NS1 127 aa12.81□□□□□ -0.36
USP43-202ENST00000570475 OR10J4P0C629 311 aa12.81□□□□□ -0.36
USP43-202ENST00000570475 PRDX2P32119 198 aa12.81□□□□□ -0.36
USP43-202ENST00000570475 ATP6V1FQ16864 119 aa12.81□□□□□ -0.36
USP43-202ENST00000570475 MOGAT3Q86VF5 341 aa12.81□□□□□ -0.36
USP43-202ENST00000570475 LOC400499M0QZD8 3231 aa12.81□□□□□ -0.36
USP43-202ENST00000570475 FCN1O00602 326 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 NTF3P20783 257 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 IL3RAP26951 378 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 RAB31Q13636 194 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 TMEM14EPQ6UXP3 125 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 RND1Q92730 232 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 UHRF2Q96PU4 802 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 TUBG2Q9NRH3 451 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 CLDN14O95500 239 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 PFN1P07737 140 aaKnown RBP12.8□□□□□ -0.36
USP43-202ENST00000570475 OR5I1Q13606 314 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 ASPHD1Q5U4P2 390 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 GTF3AQ92664 365 aaKnown RBP12.8□□□□□ -0.36
USP43-202ENST00000570475 HSPB7Q9UBY9 170 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 COLQQ9Y215 455 aaPredicted RBP12.8□□□□□ -0.36
USP43-202ENST00000570475 RPP30P78346 268 aaKnown RBP12.8□□□□□ -0.36
USP43-202ENST00000570475 FXYD3Q14802 87 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 NRN1LQ496H8 165 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 ZNF114Q8NC26 417 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 OR10G8Q8NGN5 311 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 COQ2Q96H96 371 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 TBX15Q96SF7 602 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 DDA1Q9BW61 102 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 OPN3Q9H1Y3 402 aaPredicted RBP12.8□□□□□ -0.36
USP43-202ENST00000570475 BDP1A6H8Y1 2624 aa12.8□□□□□ -0.36
USP43-202ENST00000570475 A8MXE2 369 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 TMEM250H0YL14 139 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 TCAPO15273 167 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 LURAP1LQ8IV03 231 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 DEFB123Q8N688 67 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 NHLRC2Q8NBF2 726 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 ZPBPQ9BS86 351 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 CXXC4Q9H2H0 198 aa12.79□□□□□ -0.36
USP43-202ENST00000570475 MS4A5Q9H3V2 200 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms