RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 CCR6P51684 374 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 AP3S2P59780 193 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 C12orf54Q6X4T0 127 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 ADAD2Q8NCV1 583 aaKnown RBP13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 TSNAXQ99598 290 aaKnown RBP13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 KIAA1456Q9P272 454 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 S1PR2O95136 353 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 IGKV1-39P01597 117 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 IGKV1D-39P04432 117 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 VDAC2P45880 294 aaPredicted RBP13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 TRIQKQ629K1 86 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 SSX9Q7RTT3 188 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 SLC35E3Q7Z769 313 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 ZNF329Q86UD4 541 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 PPP1R27Q86WC6 154 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 KLHDC1Q8N7A1 406 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 C11orf44Q8N8P7 122 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 OR4S2Q8NH73 311 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 SPATA3Q8NHX4 192 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 S100ZQ8WXG8 99 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 BORCS5Q969J3 196 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 TP53RKQ96S44 253 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 SCP2D1Q9UJQ7 156 aa13.11□□□□□ -0.31
CNEP1R1-210ENST00000568890 ARPC1BO15143 372 aaKnown RBP13.1□□□□□ -0.31
CNEP1R1-210ENST00000568890 RBFOX2O43251 390 aaKnown RBP eCLIP13.1□□□□□ -0.31
CNEP1R1-210ENST00000568890 CTSDP07339 412 aaPredicted RBP13.1□□□□□ -0.31
CNEP1R1-210ENST00000568890 RPA2P15927 270 aa13.1□□□□□ -0.31
CNEP1R1-210ENST00000568890 UBE2KP61086 200 aa13.1□□□□□ -0.31
CNEP1R1-210ENST00000568890 RND3P61587 244 aa13.1□□□□□ -0.31
CNEP1R1-210ENST00000568890 CATR1Q13166 79 aa13.1□□□□□ -0.31
CNEP1R1-210ENST00000568890 SP6Q3SY56 376 aa13.1□□□□□ -0.31
CNEP1R1-210ENST00000568890 TCTEX1D4Q5JR98 221 aa13.1□□□□□ -0.31
CNEP1R1-210ENST00000568890 ZFAND1Q8TCF1 268 aa13.1□□□□□ -0.31
CNEP1R1-210ENST00000568890 TMEM230Q96A57 120 aa13.1□□□□□ -0.31
CNEP1R1-210ENST00000568890 ZNF486Q96H40 463 aaPredicted RBP13.1□□□□□ -0.31
CNEP1R1-210ENST00000568890 RHOVQ96L33 236 aa13.1□□□□□ -0.31
CNEP1R1-210ENST00000568890 TRAV3A0A0B4J244 114 aa13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 CA2P00918 260 aa13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 IL6RP08887 468 aaPredicted RBP13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 LPAR6P43657 344 aa13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 PLGLAQ15195 96 aa13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 ZNF562Q6V9R5 426 aa13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 C3orf56Q8N813 242 aa13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 FAM103A1Q9BTL3 118 aaKnown RBP13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 ZNF747Q9BV97 191 aa13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 G3V318 75 aa13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 ATP6V0E1O15342 81 aa13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 SPDEFO95238 335 aa13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 HPRT1P00492 218 aa13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 CD40LGP29965 261 aa13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 SURF2Q15527 256 aaPredicted RBP13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 ARSJQ5FYB0 599 aaPredicted RBP13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 PUSL1Q8N0Z8 303 aaKnown RBP13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 DEDD2Q8WXF8 326 aa13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 OR51J1Q9H342 316 aa13.09□□□□□ -0.31
CNEP1R1-210ENST00000568890 E7EUB6 86 aa13.08□□□□□ -0.32
CNEP1R1-210ENST00000568890 IGF1P05019 195 aa13.08□□□□□ -0.32
CNEP1R1-210ENST00000568890 FAUP35544 74 aaKnown RBP13.08□□□□□ -0.32
CNEP1R1-210ENST00000568890 KIR2DS2P43631 304 aa13.08□□□□□ -0.32
CNEP1R1-210ENST00000568890 CBX3Q13185 183 aa13.08□□□□□ -0.32
CNEP1R1-210ENST00000568890 STPG2Q8N412 459 aa13.08□□□□□ -0.32
CNEP1R1-210ENST00000568890 TEX45Q8NA69 505 aa13.08□□□□□ -0.32
CNEP1R1-210ENST00000568890 CITED1Q99966 193 aa13.08□□□□□ -0.32
CNEP1R1-210ENST00000568890 CCDC32Q9BV29 185 aa13.08□□□□□ -0.32
CNEP1R1-210ENST00000568890 ZNF430Q9H8G1 570 aaPredicted RBP13.08□□□□□ -0.32
CNEP1R1-210ENST00000568890 PLEKHA2Q9HB19 425 aa13.08□□□□□ -0.32
CNEP1R1-210ENST00000568890 WSB1Q9Y6I7 421 aa13.08□□□□□ -0.32
CNEP1R1-210ENST00000568890 PKD1L1Q8TDX9 2849 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 KRASP01116 189 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 MYOD1P15172 320 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 PRSS8Q16651 343 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 OR4A47Q6IF82 309 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 CENPVQ7Z7K6 275 aaPredicted RBP13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 OR5AU1Q8NGC0 362 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 CD300LFQ8TDQ1 290 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 GLYATL2Q8WU03 294 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 COPZ2Q9P299 210 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 TBC1D24Q9ULP9 559 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 C3orf85A0A1B0GTC6 90 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 CD28P10747 220 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 SUPT4H1P63272 117 aaKnown RBP13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 CFHR3Q02985 330 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 POC5Q8NA72 575 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 FLVCR2Q9UPI3 526 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 NUBP2Q9Y5Y2 271 aa13.07□□□□□ -0.32
CNEP1R1-210ENST00000568890 A0A1B0GW64 132 aa13.06□□□□□ -0.32
CNEP1R1-210ENST00000568890 AP4M1O00189 453 aa13.06□□□□□ -0.32
CNEP1R1-210ENST00000568890 OR2A4O95047 310 aa13.06□□□□□ -0.32
CNEP1R1-210ENST00000568890 NQO2P16083 231 aa13.06□□□□□ -0.32
CNEP1R1-210ENST00000568890 PPIFP30405 207 aaKnown RBP13.06□□□□□ -0.32
CNEP1R1-210ENST00000568890 G6PCP35575 357 aa13.06□□□□□ -0.32
CNEP1R1-210ENST00000568890 ECI1P42126 302 aa13.06□□□□□ -0.32
CNEP1R1-210ENST00000568890 INPP1P49441 399 aa13.06□□□□□ -0.32
CNEP1R1-210ENST00000568890 TAS2R31P59538 309 aa13.06□□□□□ -0.32
CNEP1R1-210ENST00000568890 ZNF846Q147U1 533 aa13.06□□□□□ -0.32
CNEP1R1-210ENST00000568890 FXYD3Q14802 87 aa13.06□□□□□ -0.32
CNEP1R1-210ENST00000568890 POU2AF1Q16633 256 aa13.06□□□□□ -0.32
CNEP1R1-210ENST00000568890 VMA21Q3ZAQ7 101 aa13.06□□□□□ -0.32
CNEP1R1-210ENST00000568890 C19orf54Q5BKX5 351 aa13.06□□□□□ -0.32
CNEP1R1-210ENST00000568890 C10orf55Q5SWW7 151 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms