RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 BLNKQ8WV28 456 aa9.23□□□□□ -0.93
PALB2-206ENST00000568219 GNB4Q9HAV0 340 aa9.23□□□□□ -0.93
PALB2-206ENST00000568219 MED13LQ71F56 2210 aa9.23□□□□□ -0.93
PALB2-206ENST00000568219 TMEM30CPA0ZSE6 113 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 LRRC30A6NM36 301 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 C17orf98A8MV24 154 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 IGHV3-48P01763 117 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 RBMXL3Q8N7X1 1067 aaKnown RBP9.22□□□□□ -0.93
PALB2-206ENST00000568219 TRIOBPQ9H2D6 2365 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 TMEM210A6NLX4 147 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 CGAP01215 116 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 ACSF3Q4G176 576 aaPredicted RBP9.22□□□□□ -0.93
PALB2-206ENST00000568219 KRTCAP3Q53RY4 240 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 ASPHD1Q5U4P2 390 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 KMT5CQ86Y97 462 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 OR8B2Q96RD0 313 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 IGKV1-6A0A0C4DH72 117 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 TOX3O15405 576 aaPredicted RBP9.22□□□□□ -0.93
PALB2-206ENST00000568219 LINC00271P0C7V0 271 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 FAM173AQ9BQD7 235 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 SH2D2AQ9NP31 389 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 ELOVL5Q9NYP7 299 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 FREM1Q5H8C1 2179 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 PRR14LQ5THK1 2151 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 M0QZ24 198 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 TNFSF4P23510 183 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 GATA2P23769 480 aaPredicted RBP9.22□□□□□ -0.93
PALB2-206ENST00000568219 KCNMB1Q16558 191 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 CENPWQ5EE01 88 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 C10orf128Q5T292 105 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 IBA57Q5T440 356 aaKnown RBP9.22□□□□□ -0.93
PALB2-206ENST00000568219 FAM53AQ6NSI3 398 aaPredicted RBP9.22□□□□□ -0.93
PALB2-206ENST00000568219 LSM10Q969L4 123 aaKnown RBP9.22□□□□□ -0.93
PALB2-206ENST00000568219 TAAR6Q96RI8 345 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 DEFB127Q9H1M4 99 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 BOKQ9UMX3 212 aaPredicted RBP9.22□□□□□ -0.93
PALB2-206ENST00000568219 RNF115Q9Y4L5 304 aa9.22□□□□□ -0.93
PALB2-206ENST00000568219 PLAUP00749 431 aa9.21□□□□□ -0.93
PALB2-206ENST00000568219 FBLN7Q53RD9 439 aa9.21□□□□□ -0.93
PALB2-206ENST00000568219 AGBL5Q8NDL9 886 aa9.21□□□□□ -0.93
PALB2-206ENST00000568219 RNASE8Q8TDE3 154 aaKnown RBP9.21□□□□□ -0.93
PALB2-206ENST00000568219 RAB37Q96AX2 223 aa9.21□□□□□ -0.93
PALB2-206ENST00000568219 YPEL4Q96NS1 127 aa9.21□□□□□ -0.93
PALB2-206ENST00000568219 KCNIP2Q9NS61 270 aa9.21□□□□□ -0.93
PALB2-206ENST00000568219 K7ERU9 68 aa9.21□□□□□ -0.94
PALB2-206ENST00000568219 IL18BPO95998 194 aa9.21□□□□□ -0.94
PALB2-206ENST00000568219 RIPPLY3P57055 190 aa9.21□□□□□ -0.94
PALB2-206ENST00000568219 NABP1Q96AH0 204 aa9.21□□□□□ -0.94
PALB2-206ENST00000568219 MCRIP2Q9BUT9 160 aaKnown RBP9.21□□□□□ -0.94
PALB2-206ENST00000568219 SSBP4Q9BWG4 385 aaPredicted RBP9.21□□□□□ -0.94
PALB2-206ENST00000568219 IL36BQ9NZH7 164 aa9.21□□□□□ -0.94
PALB2-206ENST00000568219 ZNF835Q9Y2P0 537 aa9.21□□□□□ -0.94
PALB2-206ENST00000568219 FRMPD3Q5JV73 1810 aa9.21□□□□□ -0.94
PALB2-206ENST00000568219 RBFOX2O43251 390 aaKnown RBP eCLIP9.21□□□□□ -0.94
PALB2-206ENST00000568219 CCL4P13236 92 aa9.21□□□□□ -0.94
PALB2-206ENST00000568219 BTF3P20290 206 aaKnown RBP9.21□□□□□ -0.94
PALB2-206ENST00000568219 ZNF441Q8N8Z8 693 aa9.21□□□□□ -0.94
PALB2-206ENST00000568219 ZNF355PQ9NSJ1 428 aa9.21□□□□□ -0.94
PALB2-206ENST00000568219 FBXL7Q9UJT9 491 aa9.21□□□□□ -0.94
PALB2-206ENST00000568219 HBZP02008 142 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 RFPL3SP0C7P2 107 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 CTSSP25774 331 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 TIMP3P35625 211 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 KLF3P57682 345 aaPredicted RBP9.2□□□□□ -0.94
PALB2-206ENST00000568219 CFHR1Q03591 330 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 PMCHL1Q16048 86 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 TBC1D28Q2M2D7 210 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 LYSMD4Q5XG99 296 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 EML5Q05BV3 1969 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 C2CD4DB7Z1M9 353 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 PRB4P10163 310 aaPredicted RBP9.2□□□□□ -0.94
PALB2-206ENST00000568219 CEACAM8P31997 349 aaPredicted RBP9.2□□□□□ -0.94
PALB2-206ENST00000568219 UBE2L3P68036 154 aaKnown RBP9.2□□□□□ -0.94
PALB2-206ENST00000568219 ZNF841Q6ZN19 808 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 HAPLN4Q86UW8 402 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 OR5P3Q8WZ94 311 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 BCL2L2Q92843 193 aaPredicted RBP9.2□□□□□ -0.94
PALB2-206ENST00000568219 LEAP2Q969E1 77 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 TMEM54Q969K7 222 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 NAA38Q9BRA0 125 aaKnown RBP9.2□□□□□ -0.94
PALB2-206ENST00000568219 SSTR5P35346 364 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 TAS2R45P59539 299 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 MAJINQ3KP22 176 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 DECR2Q9NUI1 292 aa9.2□□□□□ -0.94
PALB2-206ENST00000568219 SERTM2A0A1B0GWG4 89 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 HAND1O96004 215 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 ARR3P36575 388 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 LHX2P50458 406 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 FOXG1P55316 489 aaPredicted RBP9.19□□□□□ -0.94
PALB2-206ENST00000568219 TEPPQ6URK8 271 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 SLC25A45Q8N413 288 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 TMEM251Q8N6I4 163 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 GSX1Q9H4S2 264 aaPredicted RBP9.19□□□□□ -0.94
PALB2-206ENST00000568219 CHCHD2Q9Y6H1 151 aaPredicted RBP9.19□□□□□ -0.94
PALB2-206ENST00000568219 PCNX1Q96RV3 2341 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 CFAP54Q96N23 3096 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 TRAV24A0A0B4J272 114 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 C3orf79P0CE67 100 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 GCHFRP30047 84 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 NXPH1P58417 271 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms