RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 GALNT14Q96FL9 552 aa12.5□□□□□ -0.41
SPG7-218ENST00000568205 TMEM222Q9H0R3 208 aa12.5□□□□□ -0.41
SPG7-218ENST00000568205 NUDT15Q9NV35 164 aa12.5□□□□□ -0.41
SPG7-218ENST00000568205 NUBP2Q9Y5Y2 271 aa12.5□□□□□ -0.41
SPG7-218ENST00000568205 TRAV6A0A075B6T7 132 aa12.49□□□□□ -0.41
SPG7-218ENST00000568205 SLC25A17O43808 307 aa12.49□□□□□ -0.41
SPG7-218ENST00000568205 HRASP01112 189 aa12.49□□□□□ -0.41
SPG7-218ENST00000568205 CRYBA1P05813 215 aa12.49□□□□□ -0.41
SPG7-218ENST00000568205 NQO2P16083 231 aa12.49□□□□□ -0.41
SPG7-218ENST00000568205 ANXA7P20073 488 aaKnown RBP12.49□□□□□ -0.41
SPG7-218ENST00000568205 UCP1P25874 307 aa12.49□□□□□ -0.41
SPG7-218ENST00000568205 UBE2KP61086 200 aa12.49□□□□□ -0.41
SPG7-218ENST00000568205 SUPT4H1P63272 117 aaKnown RBP12.49□□□□□ -0.41
SPG7-218ENST00000568205 DHODHQ02127 395 aa12.49□□□□□ -0.41
SPG7-218ENST00000568205 VMA21Q3ZAQ7 101 aa12.49□□□□□ -0.41
SPG7-218ENST00000568205 DUSP18Q8NEJ0 188 aa12.49□□□□□ -0.41
SPG7-218ENST00000568205 RHOVQ96L33 236 aa12.49□□□□□ -0.41
SPG7-218ENST00000568205 RASL11BQ9BPW5 248 aa12.49□□□□□ -0.41
SPG7-218ENST00000568205 FBXL15Q9H469 300 aa12.49□□□□□ -0.41
SPG7-218ENST00000568205 METTL1Q9UBP6 276 aaKnown RBP12.49□□□□□ -0.41
SPG7-218ENST00000568205 KCNIP3Q9Y2W7 256 aa12.49□□□□□ -0.41
SPG7-218ENST00000568205 SH2D7A6NKC9 451 aaPredicted RBP12.48□□□□□ -0.41
SPG7-218ENST00000568205 CRYGBP07316 175 aa12.48□□□□□ -0.41
SPG7-218ENST00000568205 H2AFB2P0C5Z0 115 aa12.48□□□□□ -0.41
SPG7-218ENST00000568205 SAA1P0DJI8 122 aaPredicted RBP12.48□□□□□ -0.41
SPG7-218ENST00000568205 ANXA3P12429 323 aa12.48□□□□□ -0.41
SPG7-218ENST00000568205 RPA2P15927 270 aa12.48□□□□□ -0.41
SPG7-218ENST00000568205 VAMP1P23763 118 aa12.48□□□□□ -0.41
SPG7-218ENST00000568205 BLCAPP62952 87 aa12.48□□□□□ -0.41
SPG7-218ENST00000568205 PPP1R1AQ13522 171 aa12.48□□□□□ -0.41
SPG7-218ENST00000568205 PLGLAQ15195 96 aa12.48□□□□□ -0.41
SPG7-218ENST00000568205 POU2AF1Q16633 256 aa12.48□□□□□ -0.41
SPG7-218ENST00000568205 TRIM16LQ309B1 348 aa12.48□□□□□ -0.41
SPG7-218ENST00000568205 VKORC1L1Q8N0U8 176 aa12.48□□□□□ -0.41
SPG7-218ENST00000568205 TEX45Q8NA69 505 aa12.48□□□□□ -0.41
SPG7-218ENST00000568205 GLYATL2Q8WU03 294 aa12.48□□□□□ -0.41
SPG7-218ENST00000568205 R3HDM4Q96D70 268 aa12.48□□□□□ -0.41
SPG7-218ENST00000568205 AIFM2Q9BRQ8 373 aa12.48□□□□□ -0.41
SPG7-218ENST00000568205 ALX4Q9H161 411 aaPredicted RBP12.48□□□□□ -0.41
SPG7-218ENST00000568205 RANBP3Q9H6Z4 567 aaPredicted RBP12.48□□□□□ -0.41
SPG7-218ENST00000568205 PTTG1O95997 202 aa12.47□□□□□ -0.41
SPG7-218ENST00000568205 IGKV1-39P01597 117 aa12.47□□□□□ -0.41
SPG7-218ENST00000568205 IGKV1D-39P04432 117 aa12.47□□□□□ -0.41
SPG7-218ENST00000568205 ERVK-16P61578 105 aa12.47□□□□□ -0.41
SPG7-218ENST00000568205 TMEM187Q14656 261 aa12.47□□□□□ -0.41
SPG7-218ENST00000568205 SSX9Q7RTT3 188 aa12.47□□□□□ -0.41
SPG7-218ENST00000568205 TAF15Q92804 592 aaKnown RBP eCLIP12.47□□□□□ -0.41
SPG7-218ENST00000568205 PRSS22Q9GZN4 317 aa12.47□□□□□ -0.41
SPG7-218ENST00000568205 ZNF702PQ9H963 129 aa12.47□□□□□ -0.41
SPG7-218ENST00000568205 BEX1Q9HBH7 125 aa12.47□□□□□ -0.41
SPG7-218ENST00000568205 TPSG1Q9NRR2 321 aa12.47□□□□□ -0.41
SPG7-218ENST00000568205 SIGLEC9Q9Y336 463 aa12.47□□□□□ -0.41
SPG7-218ENST00000568205 CUBNO60494 3623 aa12.47□□□□□ -0.41
SPG7-218ENST00000568205 MARCH11A6NNE9 402 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 TSPAN9O75954 239 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 OR2A4O95047 310 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 NDUFA7O95182 113 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 SFT2D2O95562 160 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 CDS2O95674 445 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 KRASP01116 189 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 HLA-DRB1P01911 266 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 OR4E1P0C645 316 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 SPNP16150 400 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 MECP2P51608 486 aaKnown RBP12.46□□□□□ -0.41
SPG7-218ENST00000568205 RELBQ01201 579 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 C4orf46Q504U0 113 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 C9orf152Q5JTZ5 239 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 OR4A47Q6IF82 309 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 LIN54Q6MZP7 749 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 PLET1Q6UQ28 207 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 Q6ZSV7 163 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 PUSL1Q8N0Z8 303 aaKnown RBP12.46□□□□□ -0.41
SPG7-218ENST00000568205 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.46□□□□□ -0.41
SPG7-218ENST00000568205 DMBX1Q8NFW5 382 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 LHFPL5Q8TAF8 219 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 VSTM2AQ8TAG5 236 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 TMEM56Q96MV1 263 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 OR2A7Q96R45 310 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 TMEM140Q9NV12 185 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 PRR13Q9NZ81 148 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 TMEM56-RWDD3S4R434 201 aa12.46□□□□□ -0.41
SPG7-218ENST00000568205 C9orf170A2RU37 121 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 FCN1O00602 326 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 ATG12O94817 140 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 KBTBD11O94819 623 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 HLA-AP01891 365 aaKnown RBP12.45□□□□□ -0.42
SPG7-218ENST00000568205 G6PCP35575 357 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 RAG2P55895 527 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 RAB25P57735 213 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 SRPXP78539 464 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 DHRS2Q13268 280 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 PRSS8Q16651 343 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 Q6ZS46 218 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 LYG2Q86SG7 212 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 PPP1R27Q86WC6 154 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 SELENOHQ8IZQ5 122 aaKnown RBP12.45□□□□□ -0.42
SPG7-218ENST00000568205 Q8N2B8 174 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 TMEM167AQ8TBQ9 72 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 CASTOR1Q8WTX7 329 aa12.45□□□□□ -0.42
SPG7-218ENST00000568205 RBPMSQ93062 196 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms