RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 SIGLECL1Q8N7X8 197 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 ZDHHC22Q8N966 263 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 CCDC71LQ8N9Z2 235 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 CAPSLQ8WWF8 208 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 ZNF486Q96H40 463 aaPredicted RBP6.2□□□□□ -1.42
SMG1-214ENST00000568038 ADTRPQ96IZ2 230 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 ZNF48Q96MX3 618 aaPredicted RBP6.2□□□□□ -1.42
SMG1-214ENST00000568038 HSD17B10Q99714 261 aaKnown RBP6.2□□□□□ -1.42
SMG1-214ENST00000568038 C20orf85Q9H1P6 137 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 C5orf66Q9H5L9 145 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 BEX1Q9HBH7 125 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 SLC2A9Q9NRM0 540 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 TNFRSF19Q9NS68 423 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 SLC35D1Q9NTN3 355 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 NUDT15Q9NV35 164 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 PRELID3BQ9Y3B1 194 aa6.2□□□□□ -1.42
SMG1-214ENST00000568038 H3BUX3 64 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 FCGR3BO75015 233 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 CRLF1O75462 422 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 VENTXO95231 258 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 IGKV1D-33P01593 117 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 IGKV1-33P01594 117 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 APOA2P02652 100 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 SNRNP70P08621 437 aaKnown RBP6.19□□□□□ -1.42
SMG1-214ENST00000568038 ANXA7P20073 488 aaKnown RBP6.19□□□□□ -1.42
SMG1-214ENST00000568038 F2RP25116 425 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 CD1BP29016 333 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 RND3P61587 244 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 SCGB2A2Q13296 93 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 HES1Q14469 280 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 LY6EQ16553 131 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 RGS21Q2M5E4 152 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 LRRC75BQ2VPJ9 315 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 SP6Q3SY56 376 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 PLET1Q6UQ28 207 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 RBMS3Q6XE24 437 aaKnown RBP6.19□□□□□ -1.42
SMG1-214ENST00000568038 Q6YL49 198 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 CLRN3Q8NCR9 226 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 DUSP18Q8NEJ0 188 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 DDB2Q92466 427 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 TMEM230Q96A57 120 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 DUX5Q96PT3 197 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 WASHC3Q9Y3C0 194 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 NUBP2Q9Y5Y2 271 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 F8P00451 2351 aa6.19□□□□□ -1.42
SMG1-214ENST00000568038 FLNAP21333 2647 aaKnown RBP6.19□□□□□ -1.42
SMG1-214ENST00000568038 C3orf85A0A1B0GTC6 90 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 BTBD17A6NE02 478 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 CRYM-AS1A6NIL9 109 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 RNF212BA8MTL3 300 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 VGLL3A8MV65 326 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 PEX14O75381 377 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 CRYZL1O95825 349 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 PTTG1O95997 202 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 IGHV4-59P01825 116 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 IGKV1-16P04430 117 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 OR5AC1P0C628 307 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 FAM157CP0CG43 387 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 FAM106CPP0CH98 169 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 TMEM11P17152 192 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 MC5RP33032 325 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 LPAR6P43657 344 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 IER3P46695 156 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 BRWD1-AS2P59051 145 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 TAS2R31P59538 309 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 RPS16P62249 146 aaKnown RBP6.18□□□□□ -1.42
SMG1-214ENST00000568038 CBX3Q13185 183 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 SLC9A3R2Q15599 337 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 RTL8BQ17RB0 113 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 C4orf46Q504U0 113 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 SLC25A42Q86VD7 318 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 SGPP2Q8IWX5 399 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 SPAG16Q8N0X2 631 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 PIFOQ8TCI5 191 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 CASTOR1Q8WTX7 329 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 ZFAND2BQ8WV99 257 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 RITA1Q96K30 269 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 TP53RKQ96S44 253 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 PRDM13Q9H4Q3 707 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 NAA60Q9H7X0 242 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 HIVEP2P31629 2446 aa6.18□□□□□ -1.42
SMG1-214ENST00000568038 FAM90A9PA6NNJ1 464 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 INMT-MINDY4F8WBC2 141 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 H0Y980 276 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 RAMP3O60896 148 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 MOSP00540 346 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 IFNA2P01563 188 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 SERPINE2P07093 398 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 OR4E1P0C645 316 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 RRASP10301 218 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 GYPEP15421 78 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 RPA2P15927 270 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 CNTFRP26992 372 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 KIR2DS2P43631 304 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 DYNLT3P51808 116 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 SUPT4H1P63272 117 aaKnown RBP6.17□□□□□ -1.42
SMG1-214ENST00000568038 PPP1R1AQ13522 171 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 HABP2Q14520 560 aaPredicted RBP6.17□□□□□ -1.42
SMG1-214ENST00000568038 AANATQ16613 207 aa6.17□□□□□ -1.42
SMG1-214ENST00000568038 TRIM16LQ309B1 348 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms