RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 G3V318 75 aa13.51□□□□□ -0.25
COMMD4-220ENST00000567720 ARPC1BO15143 372 aaKnown RBP13.51□□□□□ -0.25
COMMD4-220ENST00000567720 RBFOX2O43251 390 aaKnown RBP eCLIP13.51□□□□□ -0.25
COMMD4-220ENST00000567720 PGLYRP1O75594 196 aaPredicted RBP13.51□□□□□ -0.25
COMMD4-220ENST00000567720 PTBP1P26599 531 aaKnown RBP eCLIP13.51□□□□□ -0.25
COMMD4-220ENST00000567720 CRIP2P52943 208 aaPredicted RBP13.51□□□□□ -0.25
COMMD4-220ENST00000567720 CD83Q01151 205 aa13.51□□□□□ -0.25
COMMD4-220ENST00000567720 MEF2DQ14814 521 aa13.51□□□□□ -0.25
COMMD4-220ENST00000567720 VMA21Q3ZAQ7 101 aa13.51□□□□□ -0.25
COMMD4-220ENST00000567720 C19orf54Q5BKX5 351 aa13.51□□□□□ -0.25
COMMD4-220ENST00000567720 SPANXN2Q5MJ10 180 aa13.51□□□□□ -0.25
COMMD4-220ENST00000567720 SLC38A6Q8IZM9 456 aa13.51□□□□□ -0.25
COMMD4-220ENST00000567720 VKORC1L1Q8N0U8 176 aa13.51□□□□□ -0.25
COMMD4-220ENST00000567720 Q8N402 240 aa13.51□□□□□ -0.25
COMMD4-220ENST00000567720 SGMS2Q8NHU3 365 aa13.51□□□□□ -0.25
COMMD4-220ENST00000567720 FAM103A1Q9BTL3 118 aaKnown RBP13.51□□□□□ -0.25
COMMD4-220ENST00000567720 SRRQ9GZT4 340 aa13.51□□□□□ -0.25
COMMD4-220ENST00000567720 FBN3Q75N90 2809 aa13.51□□□□□ -0.25
COMMD4-220ENST00000567720 EGR2P11161 476 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-220ENST00000567720 VDAC1P21796 283 aa13.5□□□□□ -0.25
COMMD4-220ENST00000567720 KLF9Q13886 244 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-220ENST00000567720 ECSCRQ19T08 205 aa13.5□□□□□ -0.25
COMMD4-220ENST00000567720 C2orf68Q2NKX9 166 aa13.5□□□□□ -0.25
COMMD4-220ENST00000567720 SCGB2B2Q4G0G5 96 aa13.5□□□□□ -0.25
COMMD4-220ENST00000567720 PRR31Q5SQ13 230 aa13.5□□□□□ -0.25
COMMD4-220ENST00000567720 CMTM1Q8IZ96 169 aa13.5□□□□□ -0.25
COMMD4-220ENST00000567720 ARPC1AQ92747 370 aa13.5□□□□□ -0.25
COMMD4-220ENST00000567720 THAP7Q9BT49 309 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-220ENST00000567720 SLC2A9Q9NRM0 540 aa13.5□□□□□ -0.25
COMMD4-220ENST00000567720 WSB1Q9Y6I7 421 aa13.5□□□□□ -0.25
COMMD4-220ENST00000567720 TRAV41A0A0B4J266 112 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 M0QZ24 198 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 S1PR2O95136 353 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 PGAM2P15259 253 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 PI3P19957 117 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 GNB1P62873 340 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 SLC35B1P78383 322 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 PRSS8Q16651 343 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 CNPY1Q3B7I2 92 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 NSUN5P1Q3KNT7 163 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 LPCAT3Q6P1A2 487 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 ZNF562Q6V9R5 426 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 LCNL1Q6ZST4 164 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 NDUFA11Q86Y39 141 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 TEX45Q8NA69 505 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 OR13C8Q8NGS7 320 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 GRPEL2Q8TAA5 225 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 ABHD5Q8WTS1 349 aa13.49□□□□□ -0.25
COMMD4-220ENST00000567720 ZNF430Q9H8G1 570 aaPredicted RBP13.49□□□□□ -0.25
COMMD4-220ENST00000567720 A0A1W2PRX2 142 aa13.48□□□□□ -0.25
COMMD4-220ENST00000567720 DISC1C4P0D8 188 aa13.48□□□□□ -0.25
COMMD4-220ENST00000567720 KBTBD11O94819 623 aa13.48□□□□□ -0.25
COMMD4-220ENST00000567720 IGHG4P01861 327 aa13.48□□□□□ -0.25
COMMD4-220ENST00000567720 F2RP25116 425 aa13.48□□□□□ -0.25
COMMD4-220ENST00000567720 PPIFP30405 207 aaKnown RBP13.48□□□□□ -0.25
COMMD4-220ENST00000567720 FXYD3Q14802 87 aa13.48□□□□□ -0.25
COMMD4-220ENST00000567720 KHDC1LQ5JSQ8 128 aa13.48□□□□□ -0.25
COMMD4-220ENST00000567720 SSX9Q7RTT3 188 aa13.48□□□□□ -0.25
COMMD4-220ENST00000567720 TBC1D26Q86UD7 250 aa13.48□□□□□ -0.25
COMMD4-220ENST00000567720 PUSL1Q8N0Z8 303 aaKnown RBP13.48□□□□□ -0.25
COMMD4-220ENST00000567720 OR51S1Q8NGJ8 323 aa13.48□□□□□ -0.25
COMMD4-220ENST00000567720 TERB2Q8NHR7 220 aa13.48□□□□□ -0.25
COMMD4-220ENST00000567720 MARCH1Q8TCQ1 289 aa13.48□□□□□ -0.25
COMMD4-220ENST00000567720 RHOVQ96L33 236 aa13.48□□□□□ -0.25
COMMD4-220ENST00000567720 GON7Q9BXV9 100 aa13.48□□□□□ -0.25
COMMD4-220ENST00000567720 SLC2A8Q9NY64 477 aa13.48□□□□□ -0.25
COMMD4-220ENST00000567720 TCRBV4S1A1TA0A5B7 111 aa13.47□□□□□ -0.25
COMMD4-220ENST00000567720 SOX15O60248 233 aa13.47□□□□□ -0.25
COMMD4-220ENST00000567720 HPRT1P00492 218 aa13.47□□□□□ -0.25
COMMD4-220ENST00000567720 TAS2R31P59538 309 aa13.47□□□□□ -0.25
COMMD4-220ENST00000567720 RND3P61587 244 aa13.47□□□□□ -0.25
COMMD4-220ENST00000567720 FOXE3Q13461 319 aa13.47□□□□□ -0.25
COMMD4-220ENST00000567720 POU2AF1Q16633 256 aa13.47□□□□□ -0.25
COMMD4-220ENST00000567720 ZNF585BQ52M93 769 aa13.47□□□□□ -0.25
COMMD4-220ENST00000567720 C10orf55Q5SWW7 151 aa13.47□□□□□ -0.25
COMMD4-220ENST00000567720 COMMD1Q8N668 190 aa13.47□□□□□ -0.25
COMMD4-220ENST00000567720 RNF152Q8N8N0 203 aa13.47□□□□□ -0.25
COMMD4-220ENST00000567720 POC5Q8NA72 575 aa13.47□□□□□ -0.25
COMMD4-220ENST00000567720 ZNF486Q96H40 463 aaPredicted RBP13.47□□□□□ -0.25
COMMD4-220ENST00000567720 SDHCQ99643 169 aaPredicted RBP13.47□□□□□ -0.25
COMMD4-220ENST00000567720 PLEKHA2Q9HB19 425 aa13.47□□□□□ -0.25
COMMD4-220ENST00000567720 COMMD9Q9P000 198 aa13.47□□□□□ -0.25
COMMD4-220ENST00000567720 TSSC4Q9Y5U2 329 aaPredicted RBP13.47□□□□□ -0.25
COMMD4-220ENST00000567720 HRASP01112 189 aa13.46□□□□□ -0.25
COMMD4-220ENST00000567720 IGLV1-40P01703 118 aa13.46□□□□□ -0.25
COMMD4-220ENST00000567720 OPN1MWP04001 364 aa13.46□□□□□ -0.25
COMMD4-220ENST00000567720 RPLP1P05386 114 aaKnown RBP13.46□□□□□ -0.25
COMMD4-220ENST00000567720 OPN1MW2P0DN77 364 aa13.46□□□□□ -0.25
COMMD4-220ENST00000567720 OPN1MW3P0DN78 364 aa13.46□□□□□ -0.25
COMMD4-220ENST00000567720 PSMB8P28062 276 aa13.46□□□□□ -0.25
COMMD4-220ENST00000567720 PIGPP57054 158 aa13.46□□□□□ -0.25
COMMD4-220ENST00000567720 RPL23AP62750 156 aaKnown RBP13.46□□□□□ -0.25
COMMD4-220ENST00000567720 TNXAQ16473 311 aa13.46□□□□□ -0.25
COMMD4-220ENST00000567720 OR4A47Q6IF82 309 aa13.46□□□□□ -0.25
COMMD4-220ENST00000567720 TEX38Q6PEX7 206 aa13.46□□□□□ -0.25
COMMD4-220ENST00000567720 TOMM5Q8N4H5 51 aa13.46□□□□□ -0.25
COMMD4-220ENST00000567720 MINDY2Q8NBR6 621 aa13.46□□□□□ -0.25
COMMD4-220ENST00000567720 LFNGQ8NES3 379 aa13.46□□□□□ -0.25
COMMD4-220ENST00000567720 VSTM2AQ8TAG5 236 aa13.46□□□□□ -0.25
COMMD4-220ENST00000567720 TMEM167AQ8TBQ9 72 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms