RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 DEFB136Q30KP8 78 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 DEFB121Q5J5C9 76 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 UBE2NLQ5JXB2 153 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 ASPHD1Q5U4P2 390 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 THOC7Q6I9Y2 204 aaKnown RBP8.64□□□□□ -1.03
CDH3-206ENST00000567674 ZNF343Q6P1L6 599 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 KCTD9Q7L273 389 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 MFSD4AQ8N468 514 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 TTC9CQ8N5M4 171 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 DCUN1D4Q92564 292 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 YIPF6Q96EC8 236 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 FAM212BQ9NTI7 297 aaPredicted RBP8.64□□□□□ -1.03
CDH3-206ENST00000567674 ANAPC10Q9UM13 185 aa8.64□□□□□ -1.03
CDH3-206ENST00000567674 TRBV9A0A0B4J1U6 114 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 OR2A4O95047 310 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 DHFRP00374 187 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 MXD1Q05195 221 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 CD69Q07108 199 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 CATR1Q13166 79 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 KLF5Q13887 457 aaPredicted RBP8.63□□□□□ -1.03
CDH3-206ENST00000567674 POU2AF1Q16633 256 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 MRGPRG-AS1Q2M3A8 158 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 LPCAT3Q6P1A2 487 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 TMEM167AQ8TBQ9 72 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 NUDCD2Q8WVJ2 157 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 SRSF12Q8WXF0 261 aaKnown RBP8.63□□□□□ -1.03
CDH3-206ENST00000567674 MAFIPQ8WZ33 124 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 DLX4Q92988 240 aaPredicted RBP8.63□□□□□ -1.03
CDH3-206ENST00000567674 SLC25A46Q96AG3 418 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 C5orf30Q96GV9 206 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 DUX3Q96PT4 197 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 OR2A7Q96R45 310 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 OR4C12Q96R67 309 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 CLCC1Q96S66 551 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 BET1LQ9NYM9 111 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 ADAM30Q9UKF2 790 aa8.63□□□□□ -1.03
CDH3-206ENST00000567674 DNAH9Q9NYC9 4486 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 SMIM31A0A1B0GVY4 71 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 MSGN1A6NI15 193 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 NPIPB5A8MRT5 1133 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 SULT1C2O00338 296 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 FCGR3BO75015 233 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 KBTBD11O94819 623 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 HPRT1P00492 218 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 PPYP01298 95 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 APOA1P02647 267 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 NFYAP23511 347 aaPredicted RBP8.62□□□□□ -1.03
CDH3-206ENST00000567674 FCGR2CP31995 323 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 RPS19P39019 145 aaKnown RBP8.62□□□□□ -1.03
CDH3-206ENST00000567674 LINC00205P59089 165 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 TAS2R31P59538 309 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 TAS2R46P59540 309 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 HSD17B13Q7Z5P4 300 aaPredicted RBP8.62□□□□□ -1.03
CDH3-206ENST00000567674 PUSL1Q8N0Z8 303 aaKnown RBP8.62□□□□□ -1.03
CDH3-206ENST00000567674 NECAP1Q8NC96 275 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 ADAD2Q8NCV1 583 aaKnown RBP8.62□□□□□ -1.03
CDH3-206ENST00000567674 OR2K2Q8NGT1 345 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 GRPEL2Q8TAA5 225 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 C15orf40Q8WUR7 153 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 SNAPC3Q92966 411 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 WWC2-AS2Q96NR7 200 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 PHB2Q99623 299 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 FAM103A1Q9BTL3 118 aaKnown RBP8.62□□□□□ -1.03
CDH3-206ENST00000567674 PLEKHA2Q9HB19 425 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 SCPEP1Q9HB40 452 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 PEF1Q9UBV8 284 aaKnown RBP8.62□□□□□ -1.03
CDH3-206ENST00000567674 ELF5Q9UKW6 265 aaPredicted RBP8.62□□□□□ -1.03
CDH3-206ENST00000567674 ZNF257Q9Y2Q1 563 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 SMAD5-AS1Q9Y6J3 95 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 A3GALT2U3KPV4 340 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 TENM3Q9P273 2699 aa8.62□□□□□ -1.03
CDH3-206ENST00000567674 A8MZ25 164 aa8.61□□□□□ -1.03
CDH3-206ENST00000567674 H0Y980 276 aa8.61□□□□□ -1.03
CDH3-206ENST00000567674 CRYGCP07315 174 aa8.61□□□□□ -1.03
CDH3-206ENST00000567674 CLEC2LP0C7M8 214 aa8.61□□□□□ -1.03
CDH3-206ENST00000567674 SAA1P0DJI8 122 aaPredicted RBP8.61□□□□□ -1.03
CDH3-206ENST00000567674 HIST1H1BP16401 226 aaKnown RBP8.61□□□□□ -1.03
CDH3-206ENST00000567674 ECI1P42126 302 aa8.61□□□□□ -1.03
CDH3-206ENST00000567674 PJVKQ0ZLH3 352 aa8.61□□□□□ -1.03
CDH3-206ENST00000567674 DYRK1AQ13627 763 aa8.61□□□□□ -1.03
CDH3-206ENST00000567674 OR5H6Q8NGV6 325 aa8.61□□□□□ -1.03
CDH3-206ENST00000567674 ATP6V0BQ99437 205 aa8.61□□□□□ -1.03
CDH3-206ENST00000567674 DCUN1D5Q9BTE7 237 aa8.61□□□□□ -1.03
CDH3-206ENST00000567674 ZNF430Q9H8G1 570 aaPredicted RBP8.61□□□□□ -1.03
CDH3-206ENST00000567674 SLC2A9Q9NRM0 540 aa8.61□□□□□ -1.03
CDH3-206ENST00000567674 ZNF355PQ9NSJ1 428 aa8.61□□□□□ -1.03
CDH3-206ENST00000567674 COMMD9Q9P000 198 aa8.61□□□□□ -1.03
CDH3-206ENST00000567674 PEMTQ9UBM1 199 aa8.61□□□□□ -1.03
CDH3-206ENST00000567674 EPPK1P58107 5090 aaKnown RBP8.61□□□□□ -1.03
CDH3-206ENST00000567674 BIRC6Q9NR09 4857 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 IGHV4OR15-8A0A075B7B6 117 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 A0A087WW49 117 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 IGKV1D-13A0A0B4J2D9 117 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 CYB5BO43169 146 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 SAP30O75446 220 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 IGLV1-51P01701 117 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 IL6RP08887 468 aaPredicted RBP8.6□□□□□ -1.03
CDH3-206ENST00000567674 ZNF735P0CB33 412 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 IGKV1-13P0DP09 117 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 NQO2P16083 231 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms